GR395386

EST Overview


Name	GR395386
Unique Name	GR395386
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	288

Libraries


Library Name	Type
LIBEST_024781 ICC4958 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR395386 vs. TrEMBL
Match: Q2HTJ8_MEDTR ((, related) OS=Medicago truncatula GN=MtrDRAFT_AC150440g13v2 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.480e-24
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 2

Query:    8 DQGEVVESKQSELGSEDSLKTDXXXXXXXXXXXXEMDTNDLSATLKSEISLNQLSKQQSRDNVDLDKIMEDFCQIERVCSMMNDDDDSKIHTQ 286
            DQ E+ +++ ++LGSEDSLKTD            +MDTND SATLKSE S NQ S QQS+DN+DLDKIMEDFCQIER CS+M+DDD+SK H Q
Sbjct:  103 DQDEI-KNQGTDLGSEDSLKTDSKRKRKSRKKSRDMDTNDPSATLKSEFSHNQHSNQQSKDNIDLDKIMEDFCQIERACSLMHDDDNSKSHDQ 194

The following BLAST results are available for this feature:

BLAST of GR395386 vs. TrEMBL

BLAST of GR395386 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1


Match Name	E-value	Identity	Description
Q2HTJ8_MEDTR	6.480e-24	62.37	(, related) OS=Medicago truncatula GN=MtrDRAFT_AC1...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 25..36 score
None	No IPR available	SEG	seg	seg	coord: 19..29 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR395386 ID=GR395386; Name=GR395386; organism=Cicer arietinum; type=EST; length=288bp
GCGGGGGGATCAAGGTGAAGTTGTGGAATCAAAGCAATCCGAATTAGGAT
CTGAAGATTCCCTGAAGACAGATTCCAAAAGAAAAAGAAAATCTCGCAAG
AAAAGCCGAGAGATGGACACCAATGATCTGAGTGCAACTTTGAAATCTGA
AATCTCACTTAATCAGCTCTCAAAGCAACAATCAAGAGATAATGTAGATT
TAGACAAGATAATGGAAGATTTTTGTCAAATTGAACGTGTTTGTTCTATG
ATGAATGATGACGATGATAGCAAAATTCATACTCAATC

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