GR404918

EST Overview
NameGR404918
Unique NameGR404918
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length320
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
[Close]
BLAST of GR404918 vs. SwissProt
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.111e-14
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV+D++KV+ ELD LPSR+I++ S       E    N  + +V  KKS ++ QR+I   WKKFV +RK    K +G+C
Sbjct:  423 EDFSRTLAERLVIDIEKVMRELDELPSRVIHKIS----LGQEKSESNSDNLMVTVKKSDIDKQRDIITGWKKFVADRK----KTSGIC 502
[Close]
BLAST of GR404918 vs. SwissProt
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.736e-13
Identity = 43/88 (48.86%), Postives = 51/88 (57.95%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV D+ KVLHELD+LPS++  +     +A N           V  KK   E   E+   W+KFV ERK    KMNGVC
Sbjct:  422 EDFSRTLAERLVADISKVLHELDTLPSKISKKMGIEGIAEN-----------VKEKKMEKEILMEVIVGWRKFVKERK----KMNGVC 494
[Close]
BLAST of GR404918 vs. SwissProt
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.738e-12
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV D++KVLHELD+LP+R+   ++  +VA  +             KK+  E Q E+   WKKFV E+KK   K N VC
Sbjct:  423 EDFSRTLAERLVRDIEKVLHELDTLPARV---NAKLAVAEEQAAANGSE----VHKKTDSEVQLEMITAWKKFVEEKKK---KTNRVC 500
[Close]
BLAST of GR404918 vs. TrEMBL
Match: A8C8H3_SOYBN (Glutamate decarboxylase OS=Glycine max GN=GAD PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.999e-25
Identity = 64/88 (72.73%), Postives = 72/88 (81.82%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV DV+KVLHELDSLP+R+I   SSTSV V       +  ++V AKKSA+ETQREITA+WKKFVLERKK NDKMNGVC
Sbjct:  423 EDFSRTLAERLVADVEKVLHELDSLPARVI---SSTSVTVTA----EENGKVVVAKKSAMETQREITAIWKKFVLERKKNNDKMNGVC 503
[Close]
BLAST of GR404918 vs. TrEMBL
Match: Q7XJB3_SOYBN (Putative glutamate decarboxylase (Fragment) OS=Glycine max GN=GAD PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.097e-23
Identity = 60/88 (68.18%), Postives = 72/88 (81.82%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV DV+KVLHELDSLP+R+I   SST+V ++      +  ++V AKK+ +ETQREITA+WKKFVLERKK NDKMNGVC
Sbjct:  370 EDFSRTLAERLVSDVEKVLHELDSLPARVI---SSTTVTLSA----EENGKVVVAKKNPMETQREITAIWKKFVLERKKNNDKMNGVC 450
[Close]
BLAST of GR404918 vs. TrEMBL
Match: A8C8H5_SOYBN (Glutamate decarboxylase OS=Glycine max GN=GAD PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.097e-23
Identity = 60/88 (68.18%), Postives = 72/88 (81.82%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV DV+KVLHELDSLP+R+I   SST+V ++      +  ++V AKK+ +ETQREITA+WKKFVLERKK NDKMNGVC
Sbjct:  423 EDFSRTLAERLVSDVEKVLHELDSLPARVI---SSTTVTLSA----EENGKVVVAKKNPMETQREITAIWKKFVLERKKNNDKMNGVC 503
[Close]
BLAST of GR404918 vs. TrEMBL
Match: B9SR96_RICCO (Glutamate decarboxylase, putative OS=Ricinus communis GN=RCOM_0112580 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.134e-19
Identity = 54/88 (61.36%), Postives = 65/88 (73.86%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRT AERLV+D++KVLHELD+LPSR+  +     +A+ E   KN T    AAKKS +ETQREIT +WKKFVLE+K    KMNGVC
Sbjct:  423 EDFSRTFAERLVLDIEKVLHELDTLPSRLREK-----IAIVEEKEKNGTK---AAKKSVIETQREITTIWKKFVLEKK----KMNGVC 498
[Close]
BLAST of GR404918 vs. TrEMBL
Match: B9SR94_RICCO (Glutamate decarboxylase, putative OS=Ricinus communis GN=RCOM_0112460 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.134e-19
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERL+ DV+KVLHELDSLPS+++++ S          +  D D  V  KK+ALETQRE+T VWKKFV+E+K    KMNGVC
Sbjct:  392 EDFSRTLAERLLNDVQKVLHELDSLPSKLLSKVS----------ICGDDDNNVVVKKTALETQREVTMVWKKFVMEKK----KMNGVC 465
[Close]
BLAST of GR404918 vs. TrEMBL
Match: B9H3K0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_858606 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.418e-16
Identity = 47/88 (53.41%), Postives = 61/88 (69.32%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV D++KV+HEL+++P ++  R S +    NE          V  KK+ALETQREIT +W+KFV+E+K    KMNGVC
Sbjct:  425 EDFSRTLAERLVNDIQKVIHELETVPCKVCARISISGDGDNE------QHGAVVVKKTALETQREITTIWRKFVMEKK----KMNGVC 502
[Close]
BLAST of GR404918 vs. TrEMBL
Match: B9S7C3_RICCO (Glutamate decarboxylase, putative OS=Ricinus communis GN=RCOM_0776380 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.215e-14
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV+D+ KVLHELD LP+++     S  V+V+    +N  +  V  KK+A+ETQREIT  WK FV+ +K      N +C
Sbjct:  101 EDFSRTLAERLVLDITKVLHELDQLPAKI-----SAKVSVSTAAEQNGKNGAVVVKKTAIETQREITTYWKNFVIAKK---SNKNTIC 180
[Close]
BLAST of GR404918 vs. TrEMBL
Match: D7LWZ5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488599 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.292e-13
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV+D++KV+ ELD LPSR+I++ S       E    N  + +V  KKS +E QR+I   WKKFV +RK    K +G+C
Sbjct:  423 EDFSRTLAERLVIDIEKVMRELDELPSRVIHKIS----LGQEKSEANSDNVMVTVKKSDVEKQRDIIIGWKKFVADRK----KTSGIC 502
[Close]
BLAST of GR404918 vs. TrEMBL
Match: Q9AT17_TOBAC (Glutamate decarboxylase isozyme 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.994e-13
Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV+D++KVLHELD+LP+R           VN  +   + +     KK+  E Q EITA WKKFV ++KK   K NGVC
Sbjct:  423 EDFSRTLAERLVIDIEKVLHELDTLPAR-----------VNAKLAVAEANGSGVHKKTDREVQLEITAAWKKFVADKKK---KTNGVC 496
[Close]
BLAST of GR404918 vs. TrEMBL
Match: B9MX23_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_678573 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.994e-13
Identity = 47/89 (52.81%), Postives = 60/89 (67.42%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAK-KSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV+D++KVLHEL++LP R+     ST +A     + N+  +  A K K  LE  REIT VW+KFV++R     KMNGVC
Sbjct:  423 EDFSRTLAERLVLDIEKVLHELETLPCRI-----STKIA-----LANEEKEAAANKEKRDLEKTREITTVWRKFVMQR-----KMNGVC 496
[Close]
BLAST of GR404918 vs. TAIR peptide
Match: AT5G17330.1 (| Symbols: GAD, GAD1 | glutamate decarboxylase | chr5:5711141-5714839 FORWARD LENGTH=502)

HSP 1 Score: 78.5666 bits (192), Expect = 8.783e-16
Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV+D++KV+ ELD LPSR+I++ S       E    N  + +V  KKS ++ QR+I   WKKFV +RK    K +G+C
Sbjct:  423 EDFSRTLAERLVIDIEKVMRELDELPSRVIHKIS----LGQEKSESNSDNLMVTVKKSDIDKQRDIITGWKKFVADRK----KTSGIC 502
[Close]
BLAST of GR404918 vs. TAIR peptide
Match: AT1G65960.2 (| Symbols: GAD2 | glutamate decarboxylase 2 | chr1:24552094-24557253 FORWARD LENGTH=494)

HSP 1 Score: 73.9442 bits (180), Expect = 2.163e-14
Identity = 43/88 (48.86%), Postives = 51/88 (57.95%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV D+ KVLHELD+LPS++  +     +A N           V  KK   E   E+   W+KFV ERK    KMNGVC
Sbjct:  422 EDFSRTLAERLVADISKVLHELDTLPSKISKKMGIEGIAEN-----------VKEKKMEKEILMEVIVGWRKFVKERK----KMNGVC 494
[Close]
BLAST of GR404918 vs. TAIR peptide
Match: AT1G65960.1 (| Symbols: GAD2 | glutamate decarboxylase 2 | chr1:24555868-24557253 FORWARD LENGTH=365)

HSP 1 Score: 73.9442 bits (180), Expect = 2.163e-14
Identity = 43/88 (48.86%), Postives = 51/88 (57.95%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV D+ KVLHELD+LPS++  +     +A N           V  KK   E   E+   W+KFV ERK    KMNGVC
Sbjct:  293 EDFSRTLAERLVADISKVLHELDTLPSKISKKMGIEGIAEN-----------VKEKKMEKEILMEVIVGWRKFVKERK----KMNGVC 365
[Close]
BLAST of GR404918 vs. TAIR peptide
Match: AT2G02010.1 (| Symbols: GAD4 | glutamate decarboxylase 4 | chr2:474375-476495 REVERSE LENGTH=493)

HSP 1 Score: 69.707 bits (169), Expect = 4.080e-13
Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = -3 
Query:   55 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFVLERKKLNDKMNGVC 318
            EDFSRTLAERLV D +KVLHELD+LP+R              +  K    ++   KK+  ETQRE+TA WKK +LE KK N   N +C
Sbjct:  423 EDFSRTLAERLVADFEKVLHELDTLPAR--------------VHAKMANGKVNGVKKTPEETQREVTAYWKK-LLETKKTN--KNTIC 493
[Close]
BLAST of GR404918 vs. TAIR peptide
Match: AT2G02000.1 (| Symbols: GAD3 | glutamate decarboxylase 3 | chr2:469505-471997 REVERSE LENGTH=500)

HSP 1 Score: 69.3218 bits (168), Expect = 5.328e-13
Identity = 39/74 (52.70%), Postives = 47/74 (63.51%), Query Frame = -3 
Query:   97 EDFSRTLAERLVVDVKKVLHELDSLPSRMINRSSSTSVAVNEIVVKNDTDQLVAAKKSALETQREITAVWKKFV 318
            EDFSRTLAERLV D +KVLHELD+LP+R+  + +S  V                 KK+  ETQRE+TA WKKFV
Sbjct:  423 EDFSRTLAERLVADFEKVLHELDTLPARVHAKMASGKVN--------------GVKKTPEETQREVTAYWKKFV 482
The following BLAST results are available for this feature:
BLAST of GR404918 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
DCE1_ARATH1.111e-1448.86Glutamate decarboxylase 1 OS=Arabidopsis thaliana ... [more]
DCE2_ARATH2.736e-1348.86Glutamate decarboxylase 2 OS=Arabidopsis thaliana ... [more]
DCE_PETHY6.738e-1247.73Glutamate decarboxylase OS=Petunia hybrida GN=GAD ... [more]
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BLAST of GR404918 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A8C8H3_SOYBN1.999e-2572.73Glutamate decarboxylase OS=Glycine max GN=GAD PE=2... [more]
Q7XJB3_SOYBN1.097e-2368.18Putative glutamate decarboxylase (Fragment) OS=Gly... [more]
A8C8H5_SOYBN1.097e-2368.18Glutamate decarboxylase OS=Glycine max GN=GAD PE=2... [more]
B9SR96_RICCO8.134e-1961.36Glutamate decarboxylase, putative OS=Ricinus commu... [more]
B9SR94_RICCO8.134e-1959.09Glutamate decarboxylase, putative OS=Ricinus commu... [more]
B9H3K0_POPTR8.418e-1653.41Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S7C3_RICCO1.215e-1450.00Glutamate decarboxylase, putative OS=Ricinus commu... [more]
D7LWZ5_ARALY2.292e-1350.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9AT17_TOBAC2.994e-1351.14Glutamate decarboxylase isozyme 1 OS=Nicotiana tab... [more]
B9MX23_POPTR2.994e-1352.81Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of GR404918 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G17330.18.783e-1648.86| Symbols: GAD, GAD1 | glutamate decarboxylase | c... [more]
AT1G65960.22.163e-1448.86| Symbols: GAD2 | glutamate decarboxylase 2 | chr1... [more]
AT1G65960.12.163e-1448.86| Symbols: GAD2 | glutamate decarboxylase 2 | chr1... [more]
AT2G02010.14.080e-1348.86| Symbols: GAD4 | glutamate decarboxylase 4 | chr2... [more]
AT2G02000.15.328e-1352.70| Symbols: GAD3 | glutamate decarboxylase 3 | chr2... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..23
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR404918 ID=GR404918; Name=GR404918; organism=Cicer arietinum; type=EST; length=320bp
CATTACTGCCTAAACCAAATAAAAATGTATTAAGGCAGATAAGAGTTGAA
TTTAACAAACACCATTCATCTTATCATTCAACTTCTTCCTCTCCAACACA
AACTTCTTCCAAACAGCAGTGATTTCCCTTTGTGTCTCCAAAGCACTCTT
TTTAGCAGCCACTAGTTGATCAGTGTCATTTTTCACAACTATTTCATTAA
CTGCAACACTAGTGCTGCTGCTCCTATTTATCATCCTTGATGGAAGTGAA
TCAAGCTCATGCAACACTTTCTTAACATCCACCACAAGACGCTCCGCTAA
TGTCCTCGAAAAGTCCTCCC
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