GR406646
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR406646 vs. SwissProt
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 7.068e-9 Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 2 Query: 56 SEAPSQPPLPATDSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE---------XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIA 298 S+APS P D+ +WCYHC+KRV VET+ + V+C EC GFVE +D + GS FLQ+LRL+A Sbjct: 2 SDAPSSSP----DATASHWCYHCNKRVVVETLDDF--VVCCECNKGFVESIQPTPAAYSSPAPPQPLSPDLNVEDSSIGSHFLQMLRLLA 85
BLAST of GR406646 vs. TrEMBL
Match: B9R8B0_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1598280 PE=4 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.506e-16 Identity = 47/90 (52.22%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 56 SEAPSQPPLPAT---DSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE-----XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIAQ 301 +E+PSQPP+PA+ YWCY C KRVS ET+AN DVIC ECKNGFVE DD FGSQFLQ+LR+IAQ Sbjct: 2 AESPSQPPIPASILETDTRQYWCYRCIKRVSTETLANESDVICLECKNGFVELITAAATPPSNTPSLTSDQADDSTFGSQFLQMLRIIAQ 91
BLAST of GR406646 vs. TrEMBL
Match: A5BX64_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007725 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.718e-8 Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 2 Query: 107 YWCYHCDKRVSVETVANLPDVICGECKNGFVE 202 YWCY CDK VS+ET+ +LPDVIC ECK GFVE Sbjct: 13 YWCYQCDKHVSIETLPDLPDVICNECKTGFVE 44
BLAST of GR406646 vs. TrEMBL
Match: A6XFC3_ARATH (COP1-interacting protein 8 OS=Arabidopsis thaliana GN=CIP8 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.454e-7 Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 2 Query: 56 SEAPSQPPLPATDSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE---------XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIA 298 S+APS P D+ +WCYHC+KRV VET+ + V+C EC GFVE +D + GS FLQ+LRL+A Sbjct: 2 SDAPSSSP----DATASHWCYHCNKRVVVETLDDF--VVCCECNKGFVESIQPTPAAYSSPAPPQPLSPDLNVEDSSIGSHFLQMLRLLA 85
BLAST of GR406646 vs. TrEMBL
Match: D7MSL3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496711 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.217e-7 Identity = 37/90 (41.11%), Postives = 47/90 (52.22%), Query Frame = 2 Query: 56 SEAPSQPPLPATDSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE---------XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIA 298 S+APS P AT S +WCYHC+KRV VET+ + V+C EC GFVE +D + GS FLQ+LRL+A Sbjct: 2 SDAPSSSP-GATAS---HWCYHCNKRVVVETLDDF--VVCCECNKGFVESIQPIPAAYSSPAPPQPLSPDLTVEDSSIGSHFLQMLRLLA 85
BLAST of GR406646 vs. TAIR peptide
Match: AT5G64920.1 (| Symbols: CIP8 | COP1-interacting protein 8 | chr5:25944338-25945342 REVERSE LENGTH=334) HSP 1 Score: 59.3066 bits (142), Expect = 5.612e-10 Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 2 Query: 56 SEAPSQPPLPATDSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE---------XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIA 298 S+APS P D+ +WCYHC+KRV VET+ + V+C EC GFVE +D + GS FLQ+LRL+A Sbjct: 2 SDAPSSSP----DATASHWCYHCNKRVVVETLDDF--VVCCECNKGFVESIQPTPAAYSSPAPPQPLSPDLNVEDSSIGSHFLQMLRLLA 85 The following BLAST results are available for this feature:
BLAST of GR406646 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR406646 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 4
BLAST of GR406646 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR406646 ID=GR406646; Name=GR406646; organism=Cicer arietinum; type=EST; length=339bpback to top |