GR406646

EST Overview
NameGR406646
Unique NameGR406646
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length339
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR406646 vs. SwissProt
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 7.068e-9
Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 2
Query:   56 SEAPSQPPLPATDSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE---------XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIA 298
            S+APS  P    D+   +WCYHC+KRV VET+ +   V+C EC  GFVE                        +D + GS FLQ+LRL+A
Sbjct:    2 SDAPSSSP----DATASHWCYHCNKRVVVETLDDF--VVCCECNKGFVESIQPTPAAYSSPAPPQPLSPDLNVEDSSIGSHFLQMLRLLA 85          
BLAST of GR406646 vs. TrEMBL
Match: B9R8B0_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_1598280 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.506e-16
Identity = 47/90 (52.22%), Postives = 54/90 (60.00%), Query Frame = 2
Query:   56 SEAPSQPPLPAT---DSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE-----XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIAQ 301
            +E+PSQPP+PA+        YWCY C KRVS ET+AN  DVIC ECKNGFVE                    DD  FGSQFLQ+LR+IAQ
Sbjct:    2 AESPSQPPIPASILETDTRQYWCYRCIKRVSTETLANESDVICLECKNGFVELITAAATPPSNTPSLTSDQADDSTFGSQFLQMLRIIAQ 91          
BLAST of GR406646 vs. TrEMBL
Match: A5BX64_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007725 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.718e-8
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 2
Query:  107 YWCYHCDKRVSVETVANLPDVICGECKNGFVE 202
            YWCY CDK VS+ET+ +LPDVIC ECK GFVE
Sbjct:   13 YWCYQCDKHVSIETLPDLPDVICNECKTGFVE 44          
BLAST of GR406646 vs. TrEMBL
Match: A6XFC3_ARATH (COP1-interacting protein 8 OS=Arabidopsis thaliana GN=CIP8 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.454e-7
Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 2
Query:   56 SEAPSQPPLPATDSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE---------XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIA 298
            S+APS  P    D+   +WCYHC+KRV VET+ +   V+C EC  GFVE                        +D + GS FLQ+LRL+A
Sbjct:    2 SDAPSSSP----DATASHWCYHCNKRVVVETLDDF--VVCCECNKGFVESIQPTPAAYSSPAPPQPLSPDLNVEDSSIGSHFLQMLRLLA 85          
BLAST of GR406646 vs. TrEMBL
Match: D7MSL3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496711 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.217e-7
Identity = 37/90 (41.11%), Postives = 47/90 (52.22%), Query Frame = 2
Query:   56 SEAPSQPPLPATDSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE---------XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIA 298
            S+APS  P  AT S   +WCYHC+KRV VET+ +   V+C EC  GFVE                        +D + GS FLQ+LRL+A
Sbjct:    2 SDAPSSSP-GATAS---HWCYHCNKRVVVETLDDF--VVCCECNKGFVESIQPIPAAYSSPAPPQPLSPDLTVEDSSIGSHFLQMLRLLA 85          
BLAST of GR406646 vs. TAIR peptide
Match: AT5G64920.1 (| Symbols: CIP8 | COP1-interacting protein 8 | chr5:25944338-25945342 REVERSE LENGTH=334)

HSP 1 Score: 59.3066 bits (142), Expect = 5.612e-10
Identity = 35/90 (38.89%), Postives = 46/90 (51.11%), Query Frame = 2
Query:   56 SEAPSQPPLPATDSPPPYWCYHCDKRVSVETVANLPDVICGECKNGFVE---------XXXXXXXXXXXXXXXDDPNFGSQFLQVLRLIA 298
            S+APS  P    D+   +WCYHC+KRV VET+ +   V+C EC  GFVE                        +D + GS FLQ+LRL+A
Sbjct:    2 SDAPSSSP----DATASHWCYHCNKRVVVETLDDF--VVCCECNKGFVESIQPTPAAYSSPAPPQPLSPDLNVEDSSIGSHFLQMLRLLA 85          
The following BLAST results are available for this feature:
BLAST of GR406646 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CIP8_ARATH7.068e-938.89E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis th... [more]
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BLAST of GR406646 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9R8B0_RICCO8.506e-1652.22Zinc finger protein, putative OS=Ricinus communis ... [more]
A5BX64_VITVI1.718e-875.00Putative uncharacterized protein OS=Vitis vinifera... [more]
A6XFC3_ARATH1.454e-738.89COP1-interacting protein 8 OS=Arabidopsis thaliana... [more]
D7MSL3_ARALY7.217e-741.11Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of GR406646 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G64920.15.612e-1038.89| Symbols: CIP8 | COP1-interacting protein 8 | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 45..60
score: NAcoord: 63..72
score
NoneNo IPR availableSEGsegsegcoord: 68..82
score: NAcoord: 101..112
score
NoneNo IPR availableSEGsegsegcoord: 24..35
score: NAcoord: 52..91
score
NoneNo IPR availableSEGsegsegcoord: 5..18
score
NoneNo IPR availableSEGsegsegcoord: 8..27
score: NAcoord: 62..75
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR406646 ID=GR406646; Name=GR406646; organism=Cicer arietinum; type=EST; length=339bp
GATAACAAATCCATCGAAGCAACAAATTAACCACCGTTCTCTCCGCCGTA
CCACGTCGGAAGCACCGTCTCAACCACCACTCCCCGCCACCGACTCTCCA
CCTCCATACTGGTGTTACCACTGCGACAAACGCGTCTCCGTCGAAACTGT
CGCAAATCTCCCCGACGTCATCTGCGGCGAGTGCAAAAACGGCTTCGTCG
AATCCATCTCTACACCTTCTCGTTCTCGTTCTCCTTCCTCTTCCTCTGAT
GACCCTAACTTTGGTTCTCAGTTCCTCCAGGTTCTTCGCTTAATCGCTCA
ATCGTCGCGTGATGACGACGCGTCTCCACCCCCTCCTCC
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