GR420479

EST Overview


Name	GR420479
Unique Name	GR420479
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	582

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 9.032e-36
Identity = 85/138 (61.59%), Postives = 94/138 (68.12%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLKPNKAVI+LQGRYA     + +     TRE+ YGHCLVAGIK      I +  A     + R    +KLVN    QHLMPT   LDVDLK+ V PD LQSKDKKVTALKE KK  E+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVN---YQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.104e-33
Identity = 83/138 (60.14%), Postives = 93/138 (67.39%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLK NKAVI+LQGRYA     + +      R+R YGHCLVAG+K      I +  A     + R    IKLVN    QHLMPT   LDVDLKEV T D+LQSKDKKV ALKEAK + E+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.104e-33
Identity = 83/138 (60.14%), Postives = 94/138 (68.12%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLK NKAVI+LQGRYA     + +     T +R YGHCLVAG+K      I +  A     + R    IKLVN    QHLMPT   LDVDLKEV T D+L+SKDKKVTALKEAK + E+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.492e-30
Identity = 74/138 (53.62%), Postives = 91/138 (65.94%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVK +KP KAVI+LQGRY      + +     T E+ YGHCLVAG+K      I +  A     + R     K++N    QH+MPT   LD+DLK VV+ D++ SKDKKVTALKEAK +FE+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVIN---YQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.707e-26
Identity = 73/139 (52.52%), Postives = 85/139 (61.15%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPTLDVDL----KEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            M KFLKPNKAVI+LQG+YA     + R     TR+R YGHCLVAGI    +  I +  A     + R    IKLVN  H      TLD DL    K+VV  D LQ++DKKVTA +  K R  +RFKTGKNRWFFTKLRF
Sbjct:    1 MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.828e-20
Identity = 60/138 (43.48%), Postives = 79/138 (57.25%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLK  K V+VL GR+A     + R     T  R YGH LV G++   +    R    +++ Q +K      +  ++  HLMPT   LDVD K V   ++ ++  KKV A KE KK  E++FKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQ---SQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFKGVAA-EAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 4.215e-17
Identity = 57/142 (40.14%), Postives = 81/142 (57.04%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKV---NIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDL-KEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            M KF+KP K V+VL GRYA     + + +   T +R Y H LVAGI      + A++ +     ++I +R  ++   V   +  HLMPT   +D+ L K VV  D  +    K  A +EAK +FE+R+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGK-----KKIAKRSKIKA-FVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.505e-17
Identity = 57/142 (40.14%), Postives = 82/142 (57.75%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKV---NIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDL-KEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            M KF+KP K V+VL GRY+     + + +   T +R Y H LVAGI      + A++ + K  A+R + +  +++   N     HLMPT   +D+ L K VV  D  +    K  A +EAK +FE+R+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGK-KKIAKRSKIKSFVKVYNYN-----HLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL27_PIG (60S ribosomal protein L27 OS=Sus scrofa GN=RPL27 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.505e-17
Identity = 57/142 (40.14%), Postives = 82/142 (57.75%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKV---NIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDL-KEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            M KF+KP K V+VL GRY+     + + +   T +R Y H LVAGI      + A++ + K  A+R + +  +++   N     HLMPT   +D+ L K VV  D  +    K  A +EAK +FE+R+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGK-KKIAKRSKIKSFVKVYNYN-----HLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of GR420479 vs. SwissProt
Match: RL27_MOUSE (60S ribosomal protein L27 OS=Mus musculus GN=Rpl27 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.505e-17
Identity = 57/142 (40.14%), Postives = 82/142 (57.75%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKV---NIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDL-KEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            M KF+KP K V+VL GRY+     + + +   T +R Y H LVAGI      + A++ + K  A+R + +  +++   N     HLMPT   +D+ L K VV  D  +    K  A +EAK +FE+R+KTGKN+WFF KLRF
Sbjct:    1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGK-KKIAKRSKIKSFVKVYNYN-----HLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136

[Close]

BLAST of GR420479 vs. TrEMBL
Match: B7FH51_MEDTR (60S ribosomal protein L27 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.185e-38
Identity = 93/138 (67.39%), Postives = 99/138 (71.74%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLKPNKAVIVLQGRYA     + +     TRERAYGHCLVAGIK      I +  A     + R    +KLVN    QHLMPT   LDVDLKEVVT D LQSKDKKVTALKEAKKRFE+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGKKAVIVKNFDDGTRERAYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVN---YQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: B7FN57_MEDTR (60S ribosomal protein L27 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.324e-38
Identity = 92/138 (66.67%), Postives = 99/138 (71.74%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLKPNKAVIVLQGRYA     + +     TR+RAYGHCLVAGIK      I +  A     + R    +KLVN    QHLMPT   LDVDLKEVVT D LQSKDKKVTALKEAKKRFE+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGKKAVIVKNFDDGTRDRAYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVEAFVKLVN---YQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: C6T3R4_SOYBN (60S ribosomal protein L27 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.682e-36
Identity = 88/138 (63.77%), Postives = 95/138 (68.84%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLKPNKAVIVLQGRYA     + R     TRER YGHCLVAGIK      I +  A     + R    +KLVN    QHLMPT   LDVDLK+ VTPD L +KDKKVTALKE KKR E+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGRKAVIVRTFDEGTRERPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVN---YQHLMPTRYTLDVDLKDAVTPDVLATKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: C6TMU7_SOYBN (60S ribosomal protein L27 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.944e-35
Identity = 87/138 (63.04%), Postives = 94/138 (68.12%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLKPNKAVIVLQGRYA     + R     TRER YGHCLVAGIK      I +  A     + R    +KLVN    QHLMPT   LDVDLK+ V PD L +KDKKVTALKE KKR E+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGKKAVIVRTFDEGTRERPYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVN---YQHLMPTRYTLDVDLKDAVNPDVLNAKDKKVTALKETKKRLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: A9P8D7_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa GN=POPTRDRAFT_706822 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.789e-34
Identity = 84/138 (60.87%), Postives = 94/138 (68.12%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLK NKAVI+LQG+YA   G + R     TR+R YGHCLVAGIK      I +  A     + R    IKLVN    QHLMPT   LDVDLK+VVT D L +KDKK+TA KE K RFE+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKTNKAVIILQGKYAGRKGVIVRSFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKDVVTADCLSTKDKKITACKETKARFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: A9PAT1_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.254e-34
Identity = 84/138 (60.87%), Postives = 94/138 (68.12%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLK NKAVI+LQG+YA   G + R     TR+R YGHCLVAGIK      I +  A     + R    IKLVN    QHLMPT   LDVDLK+VVT D L +KDKK+TA KE K RFE+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKTNKAVIILQGKYAGRKGVIVRSFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKDVVTADYLSTKDKKITACKETKARFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: B9HD67_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa GN=POPTRDRAFT_560241 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.168e-34
Identity = 83/138 (60.14%), Postives = 94/138 (68.12%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLKPNKAVIVLQGRYA     + +     TR+R YGHCLVAGIK      I +  A     + R    +K+VN    QHLMPT   LDVDLK++VTPD L +KDKKV A KE K RFE+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIVLQGRYAGRKAVIVKHFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKCFVKVVN---YQHLMPTRYTLDVDLKDLVTPDCLATKDKKVVACKETKTRFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: D7MB93_ARALY (60S ribosomal protein L27 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493389 PE=4 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.067e-33
Identity = 85/138 (61.59%), Postives = 95/138 (68.84%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLK NKAVI+LQGRYA     + +     TR+RAYGHCLVAG+K      I +  A     + R    IKLVN    QHLMPT   LDVDLKEV T D+LQSKDKKV ALKEAK + E+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTRDRAYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: A9PBR8_POPTR (60S ribosomal protein L27 OS=Populus trichocarpa GN=POPTRDRAFT_824991 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.820e-33
Identity = 83/138 (60.14%), Postives = 93/138 (67.39%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLKPNKAVI+LQGRYA     + +     TR+R YGHCLVAGIK      I +        + R    IKLVN    QHLMPT   LDVDLK+ VT DSL +KDKKVTA K+ K RFE+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKPNKAVIILQGRYAGRKAVIVKHFDDGTRDRPYGHCLVAGIKKYPSKVIKKDSTKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKDAVTADSLTTKDKKVTACKDTKARFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TrEMBL
Match: B9RI41_RICCO (60S ribosomal protein L27 OS=Ricinus communis GN=RCOM_1576060 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.915e-33
Identity = 82/138 (59.42%), Postives = 93/138 (67.39%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLKPNKAVI+LQGRYA     + R     TR+R YGHCLVAGI       I +  A     + R    +K+VN     HLMPT   LDVDLK+V TPD+L +KDKKVTA KE KKR EDRFKTGKNRWFF+KLRF
Sbjct:    1 MVKFLKPNKAVILLQGRYAGRKAVIVRSFDDGTRDRPYGHCLVAGISKYPAKVIKKDSAKKTAKKSRVKAFMKVVN---YSHLMPTRYTLDVDLKDVATPDALVTKDKKVTAAKEIKKRLEDRFKTGKNRWFFSKLRF 135

[Close]

BLAST of GR420479 vs. TAIR peptide
Match: AT4G15000.1 (| Symbols: | Ribosomal L27e protein family | chr4:8571896-8572303 FORWARD LENGTH=135)

HSP 1 Score: 142.895 bits (359), Expect = 1.168e-34
Identity = 83/138 (60.14%), Postives = 93/138 (67.39%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLK NKAVI+LQGRYA     + +      R+R YGHCLVAG+K      I +  A     + R    IKLVN    QHLMPT   LDVDLKEV T D+LQSKDKKV ALKEAK + E+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TAIR peptide
Match: AT3G22230.1 (| Symbols: | Ribosomal L27e protein family | chr3:7844136-7844543 REVERSE LENGTH=135)

HSP 1 Score: 142.895 bits (359), Expect = 1.168e-34
Identity = 83/138 (60.14%), Postives = 94/138 (68.12%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVKFLK NKAVI+LQGRYA     + +     T +R YGHCLVAG+K      I +  A     + R    IKLVN    QHLMPT   LDVDLKEV T D+L+SKDKKVTALKEAK + E+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135

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BLAST of GR420479 vs. TAIR peptide
Match: AT2G32220.1 (| Symbols: | Ribosomal L27e protein family | chr2:13678945-13679352 FORWARD LENGTH=135)

HSP 1 Score: 132.494 bits (332), Expect = 1.579e-31
Identity = 74/138 (53.62%), Postives = 91/138 (65.94%), Query Frame = -2

Query:  147 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMPT---LDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKTGKNRWFFTKLRF 551
            MVK +KP KAVI+LQGRY      + +     T E+ YGHCLVAG+K      I +  A     + R     K++N    QH+MPT   LD+DLK VV+ D++ SKDKKVTALKEAK +FE+RFKTGKNRWFFTKLRF
Sbjct:    1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVIN---YQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135

[Close]

BLAST of GR420479 vs. TAIR peptide
Match: AT4G15000.2 (| Symbols: | Ribosomal L27e protein family | chr4:8571896-8572387 FORWARD LENGTH=131)

HSP 1 Score: 115.931 bits (289), Expect = 1.529e-26
Identity = 71/126 (56.35%), Postives = 81/126 (64.29%), Query Frame = -2

Query:  183 MVKFLKPNKAVIVLQGRYAVDDGTVKRPL*FVTRERAYGHCLVAGIKVNIQASISRVKAFARRIQQRKPLRIKLVN*LHSQHLMP---TLDVDLKEVVTPDSLQSKDKKVTALKEAKKRFEDRFKT 551
            MVKFLK NKAVI+LQGRYA     + +      R+R YGHCLVAG+K      I +  A     + R    IKLVN    QHLMP   TLDVDLKEV T D+LQSKDKKV ALKEAK + E+RFKT
Sbjct:    1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVN---YQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKT 123

The following BLAST results are available for this feature:

BLAST of GR420479 vs. SwissProt
BLAST of GR420479 vs. TrEMBL
BLAST of GR420479 vs. TAIR peptide

BLAST of GR420479 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL27_PEA	9.032e-36	61.59	60S ribosomal protein L27 OS=Pisum sativum GN=RPL2...	[more]
RL273_ARATH	1.104e-33	60.14	60S ribosomal protein L27-3 OS=Arabidopsis thalian...	[more]
RL272_ARATH	1.104e-33	60.14	60S ribosomal protein L27-2 OS=Arabidopsis thalian...	[more]
RL271_ARATH	1.492e-30	53.62	60S ribosomal protein L27-1 OS=Arabidopsis thalian...	[more]
RL27_SOLTU	1.707e-26	52.52	60S ribosomal protein L27 OS=Solanum tuberosum GN=...	[more]
RL27_PYRST	1.828e-20	43.48	60S ribosomal protein L27 OS=Pyrobotrys stellata G...	[more]
RL27_DANRE	4.215e-17	40.14	60S ribosomal protein L27 OS=Danio rerio GN=rpl27 ...	[more]
RL27_RAT	5.505e-17	40.14	60S ribosomal protein L27 OS=Rattus norvegicus GN=...	[more]
RL27_PIG	5.505e-17	40.14	60S ribosomal protein L27 OS=Sus scrofa GN=RPL27 P...	[more]
RL27_MOUSE	5.505e-17	40.14	60S ribosomal protein L27 OS=Mus musculus GN=Rpl27...	[more]

BLAST of GR420479 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FH51_MEDTR	4.185e-38	67.39	60S ribosomal protein L27 OS=Medicago truncatula P...	[more]
B7FN57_MEDTR	9.324e-38	66.67	60S ribosomal protein L27 OS=Medicago truncatula P...	[more]
C6T3R4_SOYBN	6.682e-36	63.77	60S ribosomal protein L27 OS=Glycine max PE=2 SV=1	[more]
C6TMU7_SOYBN	1.944e-35	63.04	60S ribosomal protein L27 OS=Glycine max PE=2 SV=1	[more]
A9P8D7_POPTR	4.789e-34	60.87	60S ribosomal protein L27 OS=Populus trichocarpa G...	[more]
A9PAT1_POPTR	6.254e-34	60.87	60S ribosomal protein L27 OS=Populus trichocarpa P...	[more]
B9HD67_POPTR	8.168e-34	60.14	60S ribosomal protein L27 OS=Populus trichocarpa G...	[more]
D7MB93_ARALY	1.067e-33	61.59	60S ribosomal protein L27 OS=Arabidopsis lyrata su...	[more]
A9PBR8_POPTR	1.820e-33	60.14	60S ribosomal protein L27 OS=Populus trichocarpa G...	[more]
B9RI41_RICCO	6.915e-33	59.42	60S ribosomal protein L27 OS=Ricinus communis GN=R...	[more]

BLAST of GR420479 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G15000.1	1.168e-34	60.14	\| Symbols: \| Ribosomal L27e protein family \| chr4...	[more]
AT3G22230.1	1.168e-34	60.14	\| Symbols: \| Ribosomal L27e protein family \| chr3...	[more]
AT2G32220.1	1.579e-31	53.62	\| Symbols: \| Ribosomal L27e protein family \| chr2...	[more]
AT4G15000.2	1.529e-26	56.35	\| Symbols: \| Ribosomal L27e protein family \| chr4...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 25..37 score
None	No IPR available	SEG	seg	seg	coord: 66..83 score
None	No IPR available	SEG	seg	seg	coord: 21..32 score
IPR001141	Ribosomal protein L27e	PANTHER	PTHR10497	60S RIBOSOMAL PROTEIN L27E	coord: 4..58 score: 2.2
IPR001141	Ribosomal protein L27e	PFAM	PF01777	Ribosomal_L27e	coord: 4..58 score: 8.4
IPR018262	Ribosomal protein L27e, conserved site	PROSITE	PS01107	RIBOSOMAL_L27E	coord: 47..58 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR420479 ID=GR420479; Name=GR420479; organism=Cicer arietinum; type=EST; length=582bp
AAATTAAAATCCTCAATGTAGTAGCATTACCAATACCAGCAACAACAATT
CCAAAATTCCAATTATCAACCATAACCAGTTCAAAAACACAACAAAATAC
TAAAATCACGATACAAAAAAACAGTTTCCAACAACAAACTAACTCAAAAC
CTGAGCTTAGTGAAAAACCACCTATTCTTCCCAGTTTTGAAACGATCCTC
GAACCTCTTCTTAGCCTCCTTCAAAGCAGTAACCTTCTTATCCTTAGACT
GAAGAGAATCAGGAGTAACAACCTCTTTAAGATCAACATCAAGAGTAGGC
ATCAAATGTTGAGAGTGTAACTAGTTCACAAGTTTAATTCTTAGCGGTTT
TCTTTGCTGAATCCTTCTTGCGAAAGCCTTAACGCGCGATATACTTGCTT
GGATATTTACCTTGATACCTGCAACTAAACAGTGACCGTAAGCACGTTCG
CGAGTTACGAACTATAACGGCCTTTTTACAGTTCCATCGTCGACGGCGTA
TCGTCCTTGAAGGACGATTACGGCTTTGTTTGGCTTCAGAAATTTCACCA
TTTTCGCGCCTCTTGATGTTGTGTCGTTTCGC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001141	Ribosomal_eL27
IPR018262	Ribosomal_L27e_CS

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