HO067085

EST Overview


Name	HO067085
Unique Name	HO067085
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	446

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS2_ORYSJ (Ribulose bisphosphate carboxylase small chain A, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS-A PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.993e-18
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   87 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS1_ORYSJ (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. japonica GN=RBCS PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.993e-18
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   87 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.993e-18
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   87 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.400e-18
Identity = 43/55 (78.18%), Postives = 45/55 (81.82%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLP+FGC  A QVLKELQE   AYPNAF+RIIGFDNVRQVQ ISFIA  P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.440e-18
Identity = 50/81 (61.73%), Postives = 53/81 (65.43%), Query Frame = -2

Query:  191 PLLXFGLSL-FRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F L   F   + NR P      YWTM KLP+FGC  A QVLKELQE   AYPN F+RIIGFDNVRQVQ ISFIA  P
Sbjct:   95 PCLEFELEHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 9.891e-18
Identity = 42/55 (76.36%), Postives = 44/55 (80.00%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLP+FGC  A QVLKELQE   AYPN F+RIIGFDNVRQVQ ISFIA  P
Sbjct:  121 YWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 9.891e-18
Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLP+FGC  A QVL ELQE  KAYPNA++RIIGFDNVRQVQ ISFIA  P
Sbjct:  123 YWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKP 177

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 9.891e-18
Identity = 42/55 (76.36%), Postives = 45/55 (81.82%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLP+FGC  A QVL ELQE  KAYPNA++RIIGFDNVRQVQ ISFIA  P
Sbjct:  123 YWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKP 177

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.292e-17
Identity = 42/55 (76.36%), Postives = 44/55 (80.00%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLP+FGC  A QVLKELQE   AYPN F+RIIGFDNVRQVQ ISFIA  P
Sbjct:  121 YWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of HO067085 vs. SwissProt
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.687e-17
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = -2

Query:  188 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXPK 355
            YWTM KLP+FGC  AVQVL+EL E++KAYP+ + RIIGFDNVRQVQ ISF+A  PK
Sbjct:  125 YWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPK 180

[Close]

BLAST of HO067085 vs. TrEMBL
Match: Q9ZP07_CICAR (Ribulose bisphosphate carboxylase small chain OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.172e-21
Identity = 51/57 (89.47%), Postives = 51/57 (89.47%), Query Frame = -2

Query:  185 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXPKE 355
            YWTM KLPLFGC  AVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQ ISFIA  PKE
Sbjct:  124 YWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPKE 180

[Close]

BLAST of HO067085 vs. TrEMBL
Match: B9T1N0_RICCO (Ribulose bisphosphate carboxylase small chain OS=Ricinus communis GN=RCOM_1158790 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.098e-18
Identity = 44/55 (80.00%), Postives = 47/55 (85.45%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLP+FGC  AVQVLKEL E +KAYPN+FVRIIGFDNVRQVQ ISFIA  P
Sbjct:  125 YWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKP 179

[Close]

BLAST of HO067085 vs. TrEMBL
Match: Q2QTK0_ORYSJ (Ribulose bisphosphate carboxylase small chain OS=Oryza sativa subsp. japonica GN=LOC_Os12g19394 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   40 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 119

[Close]

BLAST of HO067085 vs. TrEMBL
Match: Q2QTJ7_ORYSJ (Ribulose bisphosphate carboxylase small chain OS=Oryza sativa subsp. japonica GN=Os12g0291400 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   87 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166

[Close]

BLAST of HO067085 vs. TrEMBL
Match: Q2QTJ1_ORYSJ (Ribulose bisphosphate carboxylase small chain OS=Oryza sativa subsp. japonica GN=Os12g0292400 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   87 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166

[Close]

BLAST of HO067085 vs. TrEMBL
Match: Q0INU2_ORYSJ (Ribulose bisphosphate carboxylase small chain OS=Oryza sativa subsp. japonica GN=Os12g0291100 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   87 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166

[Close]

BLAST of HO067085 vs. TrEMBL
Match: B7E6P1_ORYSJ (Ribulose bisphosphate carboxylase small chain OS=Oryza sativa subsp. japonica GN=OsJ_17688 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   87 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166

[Close]

BLAST of HO067085 vs. TrEMBL
Match: A6N1G6_ORYSI (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   15 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 94

[Close]

BLAST of HO067085 vs. TrEMBL
Match: A6N149_ORYSI (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   69 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 148

[Close]

BLAST of HO067085 vs. TrEMBL
Match: A6N0B6_ORYSI (Ribulose bisphosphate carboxylase small chain OS=Oryza sativa subsp. indica GN=OsI_38042 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.469e-17
Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = -2

Query:  191 PLLXFGLSLFRXEQVNREPY---PXYWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 421
            P L F    F   + +R P      YWTM KLP+FGC  A QVLKEL+E  KAYP+AFVRIIGFDNVRQVQ ISFIA  P
Sbjct:   87 PCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKP 166

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT1G67090.1 (| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180)

HSP 1 Score: 87.0409 bits (214), Expect = 4.481e-18
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLPLFGC  + QVLKE++E  K YPNAF+RIIGFDN RQVQ ISFIA  P
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT5G38410.3 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=186)

HSP 1 Score: 84.7297 bits (208), Expect = 2.224e-17
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLPLFGC  + QVLKE++E  K YP AF+RIIGFDN RQVQ ISFIA  P
Sbjct:  126 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 180

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT5G38410.2 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=174)

HSP 1 Score: 84.7297 bits (208), Expect = 2.224e-17
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLPLFGC  + QVLKE++E  K YP AF+RIIGFDN RQVQ ISFIA  P
Sbjct:  114 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 168

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT5G38410.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=181)

HSP 1 Score: 84.7297 bits (208), Expect = 2.224e-17
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLPLFGC  + QVLKE++E  K YP AF+RIIGFDN RQVQ ISFIA  P
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT5G38420.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15381203-15381978 REVERSE LENGTH=181)

HSP 1 Score: 84.7297 bits (208), Expect = 2.224e-17
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLPLFGC  + QVLKE++E  K YP AF+RIIGFDN RQVQ ISFIA  P
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT5G38430.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181)

HSP 1 Score: 84.7297 bits (208), Expect = 2.224e-17
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = -2

Query:  191 YWTMXKLPLFGCXXAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQXISFIAXXP 355
            YWTM KLPLFGC  + QVLKE++E  K YP AF+RIIGFDN RQVQ ISFIA  P
Sbjct:  121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 175

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT5G56670.1 (| Symbols: | Ribosomal protein S30 family protein | chr5:22935413-22935981 REVERSE LENGTH=62)

HSP 1 Score: 55.4546 bits (132), Expect = 1.445e-8
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 1

Query:  361 GKVHGSLARAGKVRGQTPKVAKQDKEXK 444
            GKVHGSLARAGKVRGQTPKVAKQDK+ K
Sbjct:    2 GKVHGSLARAGKVRGQTPKVAKQDKKKK 29

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT4G29390.1 (| Symbols: | Ribosomal protein S30 family protein | chr4:14465212-14465902 REVERSE LENGTH=62)

HSP 1 Score: 55.4546 bits (132), Expect = 1.445e-8
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 1

Query:  361 GKVHGSLARAGKVRGQTPKVAKQDKEXK 444
            GKVHGSLARAGKVRGQTPKVAKQDK+ K
Sbjct:    2 GKVHGSLARAGKVRGQTPKVAKQDKKKK 29

[Close]

BLAST of HO067085 vs. TAIR peptide
Match: AT2G19750.1 (| Symbols: | Ribosomal protein S30 family protein | chr2:8515037-8515806 FORWARD LENGTH=62)

HSP 1 Score: 55.4546 bits (132), Expect = 1.445e-8
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 1

Query:  361 GKVHGSLARAGKVRGQTPKVAKQDKEXK 444
            GKVHGSLARAGKVRGQTPKVAKQDK+ K
Sbjct:    2 GKVHGSLARAGKVRGQTPKVAKQDKKKK 29

The following BLAST results are available for this feature:

BLAST of HO067085 vs. SwissProt
BLAST of HO067085 vs. TrEMBL
BLAST of HO067085 vs. TAIR peptide

BLAST of HO067085 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RBS2_ORYSJ	1.993e-18	61.25	Ribulose bisphosphate carboxylase small chain A, c...	[more]
RBS1_ORYSJ	1.993e-18	61.25	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS1_ORYSI	1.993e-18	61.25	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_GLYTA	3.400e-18	78.18	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS1_SOYBN	4.440e-18	61.73	Ribulose bisphosphate carboxylase small chain 1, c...	[more]
RBS4_SOYBN	9.891e-18	76.36	Ribulose bisphosphate carboxylase small chain 4, c...	[more]
RBS2_PETHY	9.891e-18	76.36	Ribulose bisphosphate carboxylase small chain SSU1...	[more]
RBS1_PETHY	9.891e-18	76.36	Ribulose bisphosphate carboxylase small chain SSU8...	[more]
RBS_GLYTO	1.292e-17	76.36	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_HEVBR	1.687e-17	71.43	Ribulose bisphosphate carboxylase small chain, chl...	[more]

BLAST of HO067085 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9ZP07_CICAR	5.172e-21	89.47	Ribulose bisphosphate carboxylase small chain OS=C...	[more]
B9T1N0_RICCO	4.098e-18	80.00	Ribulose bisphosphate carboxylase small chain OS=R...	[more]
Q2QTK0_ORYSJ	3.469e-17	61.25	Ribulose bisphosphate carboxylase small chain OS=O...	[more]
Q2QTJ7_ORYSJ	3.469e-17	61.25	Ribulose bisphosphate carboxylase small chain OS=O...	[more]
Q2QTJ1_ORYSJ	3.469e-17	61.25	Ribulose bisphosphate carboxylase small chain OS=O...	[more]
Q0INU2_ORYSJ	3.469e-17	61.25	Ribulose bisphosphate carboxylase small chain OS=O...	[more]
B7E6P1_ORYSJ	3.469e-17	61.25	Ribulose bisphosphate carboxylase small chain OS=O...	[more]
A6N1G6_ORYSI	3.469e-17	61.25	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
A6N149_ORYSI	3.469e-17	61.25	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
A6N0B6_ORYSI	3.469e-17	61.25	Ribulose bisphosphate carboxylase small chain OS=O...	[more]

BLAST of HO067085 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 9


Match Name	E-value	Identity	Description
AT1G67090.1	4.481e-18	72.73	\| Symbols: RBCS1A \| ribulose bisphosphate carboxyl...	[more]
AT5G38410.3	2.224e-17	70.91	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.2	2.224e-17	70.91	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.1	2.224e-17	70.91	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38420.1	2.224e-17	70.91	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38430.1	2.224e-17	70.91	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G56670.1	1.445e-8	92.86	\| Symbols: \| Ribosomal protein S30 family protein...	[more]
AT4G29390.1	1.445e-8	92.86	\| Symbols: \| Ribosomal protein S30 family protein...	[more]
AT2G19750.1	1.445e-8	92.86	\| Symbols: \| Ribosomal protein S30 family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006846	Ribosomal protein S30	PANTHER	PTHR12650	40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI	coord: 28..55 score: 9.5
IPR006846	Ribosomal protein S30	PFAM	PF04758	Ribosomal_S30	coord: 29..55 score: 6.2
None	No IPR available	PANTHER	PTHR12650:SF6	40S RIBOSOMAL PROTEIN S30	coord: 28..55 score: 9.5
IPR000894	Ribulose bisphosphate carboxylase, small chain	PRINTS	PR00152	RUBISCOSMALL	coord: 25..54 score: 4.2e-20coord: 59..85 score: 4.2
IPR000894	Ribulose bisphosphate carboxylase, small chain	GENE3D	3.30.190.10	no description	coord: 26..87 score: 4.2
IPR000894	Ribulose bisphosphate carboxylase, small chain	PFAM	PF00101	RuBisCO_small	coord: 24..85 score: 2.5
IPR000894	Ribulose bisphosphate carboxylase, small chain	SMART	SM00961	no description	coord: 9..85 score: 8.4
IPR000894	Ribulose bisphosphate carboxylase, small chain	SUPERFAMILY	55239	RuBisCO, small subunit	coord: 31..87 score: 1.7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067085 ID=HO067085; Name=HO067085; organism=Cicer arietinum; type=EST; length=446bp
GANAATGAATAAAAGGACCATTTCATTTATTAACTCTTATCCATCCATTT
GCATTTGAAGTCCGAAAGTAAAAACCGAAAAAACAAAGGAAGACATTCCT
TTGAANAANAAAAGGAAATTACNGGCATAACAAATGGGAGAAAATAAATG
ATTCTTCCAAGANAGTTAATACNCAAACTTANAACTCTTTAGGNGNGNGN
GCAATGAAACTGATGCNCTGCACTTGGCGAACGTTGTCGAATCCGATGAT
GCGGACGAAAGCATTAGGGTAAGCCTTGACAACTTCCTGAAGTTCCTTCA
ACACTTGAACAGCCNCAGNGCAACCAAACAATGGAAGCTTCCNCATTGTC
CAGTACNCGGGGTAAGGTTCACGGTTCACTTGCTCGNGCCGGAAAAGTGA
GAGGCCAAACNCCAAAAGTGGCCAAGCAGGACAAGGAGAANAAGCC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0016984	ribulose-bisphosphate carboxylase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation
GO:0015977	carbon fixation

Vocabulary: **INTERPRO**
Term	Definition
IPR006846	Ribosomal_eS30
IPR024681	RuBisCO_ssu

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