GR394849

EST Overview


Name	GR394849
Unique Name	GR394849
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	369

Libraries


Library Name	Type
LIBEST_024779 ICC1882 Slow drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR394849 vs. TrEMBL
Match: D7KVY3_ARALY (Protein binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477082 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.048e-14
Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = -2

Query:   96 RMKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 248
            R +MC NCG++ESCVL+ PCRHLCLC V GS+   CPIC+  K AS+HVNM
Sbjct:  294 RRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICRSPKNASVHVNM 344

[Close]

BLAST of GR394849 vs. TrEMBL
Match: B9NAA8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_586872 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.898e-14
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = -2

Query:   96 MCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 239
            MC NC K+ESCVL+ PCRHLCLCTV GS+   CPIC+  K AS+HVN+
Sbjct:  289 MCRNCNKEESCVLLLPCRHLCLCTVCGSSLHTCPICRATKNASVHVNL 336

[Close]

BLAST of GR394849 vs. TrEMBL
Match: Q8LAY3_ARATH (Inhibitor of apoptosis-like protein OS=Arabidopsis thaliana GN=At1g79110 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.347e-13
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = -2

Query:   96 RMKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 248
            R +MC NCG++ESCVL+ PCRHLCLC V GS+   CPIC   K AS+HVNM
Sbjct:  306 RRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVNM 356

[Close]

BLAST of GR394849 vs. TrEMBL
Match: Q0WLZ6_ARATH (Putative uncharacterized protein At1g79110 OS=Arabidopsis thaliana GN=At1g79110 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.347e-13
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = -2

Query:   96 RMKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 248
            R +MC NCG++ESCVL+ PCRHLCLC V GS+   CPIC   K AS+HVNM
Sbjct:  303 RRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVNM 353

[Close]

BLAST of GR394849 vs. TrEMBL
Match: Q0WLS3_ARATH (Putative uncharacterized protein At1g79110 OS=Arabidopsis thaliana GN=At1g79110 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.347e-13
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = -2

Query:   96 RMKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 248
            R +MC NCG++ESCVL+ PCRHLCLC V GS+   CPIC   K AS+HVNM
Sbjct:  303 RRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVNM 353

[Close]

BLAST of GR394849 vs. TrEMBL
Match: O64540_ARATH (YUP8H12R.27 protein OS=Arabidopsis thaliana GN=YUP8H12R.27 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.347e-13
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = -2

Query:   96 RMKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 248
            R +MC NCG++ESCVL+ PCRHLCLC V GS+   CPIC   K AS+HVNM
Sbjct:  295 RRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVNM 345

[Close]

BLAST of GR394849 vs. TrEMBL
Match: B9RI39_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1575940 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.760e-13
Identity = 33/49 (67.35%), Postives = 37/49 (75.51%), Query Frame = -2

Query:   96 KMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 242
            +MC  C K+ESCVL+ PCRHLCLCTV GS+   CPICK  K AS HVNM
Sbjct:  284 RMCRKCRKEESCVLLLPCRHLCLCTVCGSSLNTCPICKATKNASFHVNM 332

[Close]

BLAST of GR394849 vs. TrEMBL
Match: B9I0I4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569175 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.298e-13
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = -2

Query:   96 MCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 239
            +C NC K ESCVL+ PCRHLCLCTV GS+   CPICK  K AS+HVN+
Sbjct:  292 LCRNCNKAESCVLLLPCRHLCLCTVCGSSLHTCPICKATKNASVHVNL 339

[Close]

BLAST of GR394849 vs. TrEMBL
Match: A9PIP1_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.298e-13
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = -2

Query:   96 MCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 239
            +C NC K ESCVL+ PCRHLCLCTV GS+   CPICK  K AS+HVN+
Sbjct:  292 LCRNCNKAESCVLLLPCRHLCLCTVCGSSLHTCPICKATKNASVHVNL 339

[Close]

BLAST of GR394849 vs. TrEMBL
Match: Q9LDD1_ARATH (At3g12920 OS=Arabidopsis thaliana GN=At3g12920/MGH6_3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.490e-12
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = -2

Query:   96 MKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 245
            M MC +CGK E+ VL+ PCRH+CLC+V GS+   CPICK  KTAS+HVN+
Sbjct:  284 MSMCRSCGKGEASVLLLPCRHMCLCSVCGSSLNTCPICKSPKTASLHVNL 333

[Close]

BLAST of GR394849 vs. TAIR peptide
Match: AT1G79110.2 (| Symbols: | zinc ion binding | chr1:29759345-29760586 FORWARD LENGTH=355)

HSP 1 Score: 79.337 bits (194), Expect = 5.809e-16
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = -2

Query:   96 RMKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 248
            R +MC NCG++ESCVL+ PCRHLCLC V GS+   CPIC   K AS+HVNM
Sbjct:  303 RRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVNM 353

[Close]

BLAST of GR394849 vs. TAIR peptide
Match: AT1G79110.1 (| Symbols: | zinc ion binding | chr1:29759345-29760586 FORWARD LENGTH=358)

HSP 1 Score: 79.337 bits (194), Expect = 5.809e-16
Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = -2

Query:   96 RMKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 248
            R +MC NCG++ESCVL+ PCRHLCLC V GS+   CPIC   K AS+HVNM
Sbjct:  306 RRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVNM 356

[Close]

BLAST of GR394849 vs. TAIR peptide
Match: AT3G12920.1 (| Symbols: | SBP (S-ribonuclease binding protein) family protein | chr3:4122127-4123323 REVERSE LENGTH=335)

HSP 1 Score: 75.8702 bits (185), Expect = 6.422e-15
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = -2

Query:   96 MKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 245
            M MC +CGK E+ VL+ PCRH+CLC+V GS+   CPICK  KTAS+HVN+
Sbjct:  284 MSMCRSCGKGEASVLLLPCRHMCLCSVCGSSLNTCPICKSPKTASLHVNL 333

[Close]

BLAST of GR394849 vs. TAIR peptide
Match: AT5G45100.2 (| Symbols: | SBP (S-ribonuclease binding protein) family protein | chr5:18218938-18219741 FORWARD LENGTH=267)

HSP 1 Score: 63.1586 bits (152), Expect = 4.308e-11
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = -2

Query:   96 CSNCGKDESCVLIFPCRHLCLCTVWGSN--FPICPICKFFKTASIHVNM 236
            C  CG+  + VL+ PCRHLCLCTV GS+     CP+C    TAS+HVNM
Sbjct:  217 CKRCGELTASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNM 265

[Close]

BLAST of GR394849 vs. TAIR peptide
Match: AT5G45100.1 (| Symbols: | SBP (S-ribonuclease binding protein) family protein | chr5:18218769-18219741 FORWARD LENGTH=294)

HSP 1 Score: 63.1586 bits (152), Expect = 4.308e-11
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = -2

Query:   96 CSNCGKDESCVLIFPCRHLCLCTVWGSN--FPICPICKFFKTASIHVNM 236
            C  CG+  + VL+ PCRHLCLCTV GS+     CP+C    TAS+HVNM
Sbjct:  244 CKRCGELTASVLVLPCRHLCLCTVCGSSALLRTCPVCDMVMTASVHVNM 292

[Close]

BLAST of GR394849 vs. TAIR peptide
Match: AT4G19700.1 (| Symbols: RING | SBP (S-ribonuclease binding protein) family protein | chr4:10713633-10714635 REVERSE LENGTH=304)

HSP 1 Score: 62.7734 bits (151), Expect = 5.626e-11
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = -2

Query:   96 CSNCGKDESCVLIFPCRHLCLCTVWGSN--FPICPICKFFKTASIHVNM 236
            C  CG+ E+ VL+ PCRHLCLCTV G +     CP+C     AS+HVNM
Sbjct:  254 CKRCGEREASVLVLPCRHLCLCTVCGGSALLRTCPVCDMVMNASVHVNM 302

[Close]

BLAST of GR394849 vs. TAIR peptide
Match: AT1G45976.1 (| Symbols: SBP1 | S-ribonuclease binding protein 1 | chr1:17199371-17200680 FORWARD LENGTH=325)

HSP 1 Score: 49.2914 bits (116), Expect = 6.437e-7
Identity = 20/50 (40.00%), Postives = 26/50 (52.00%), Query Frame = -2

Query:   96 MKMCSNCGKDESCVLIFPCRHLCLCTVWGSNFPICPICKFFKTASIHVNM 245
            M MC  CG  E C+L+ PC H+CLC         CP+C+  K   + V M
Sbjct:  276 MMMCRFCGVREMCMLLLPCNHMCLCKECERKLSSCPLCQSSKFLGMEVYM 325

The following BLAST results are available for this feature:

BLAST of GR394849 vs. TrEMBL
BLAST of GR394849 vs. TAIR peptide

BLAST of GR394849 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7KVY3_ARALY	6.048e-14	64.71	Protein binding protein OS=Arabidopsis lyrata subs...	[more]
B9NAA8_POPTR	7.898e-14	66.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q8LAY3_ARATH	1.347e-13	64.71	Inhibitor of apoptosis-like protein OS=Arabidopsis...	[more]
Q0WLZ6_ARATH	1.347e-13	64.71	Putative uncharacterized protein At1g79110 OS=Arab...	[more]
Q0WLS3_ARATH	1.347e-13	64.71	Putative uncharacterized protein At1g79110 OS=Arab...	[more]
O64540_ARATH	1.347e-13	64.71	YUP8H12R.27 protein OS=Arabidopsis thaliana GN=YUP...	[more]
B9RI39_RICCO	1.760e-13	67.35	Putative uncharacterized protein OS=Ricinus commun...	[more]
B9I0I4_POPTR	2.298e-13	66.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PIP1_9ROSI	2.298e-13	66.67	Putative uncharacterized protein OS=Populus tricho...	[more]
Q9LDD1_ARATH	1.490e-12	62.00	At3g12920 OS=Arabidopsis thaliana GN=At3g12920/MGH...	[more]

BLAST of GR394849 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT1G79110.2	5.809e-16	64.71	\| Symbols: \| zinc ion binding \| chr1:29759345-297...	[more]
AT1G79110.1	5.809e-16	64.71	\| Symbols: \| zinc ion binding \| chr1:29759345-297...	[more]
AT3G12920.1	6.422e-15	62.00	\| Symbols: \| SBP (S-ribonuclease binding protein)...	[more]
AT5G45100.2	4.308e-11	55.10	\| Symbols: \| SBP (S-ribonuclease binding protein)...	[more]
AT5G45100.1	4.308e-11	55.10	\| Symbols: \| SBP (S-ribonuclease binding protein)...	[more]
AT4G19700.1	5.626e-11	53.06	\| Symbols: RING \| SBP (S-ribonuclease binding prot...	[more]
AT1G45976.1	6.437e-7	40.00	\| Symbols: SBP1 \| S-ribonuclease binding protein 1...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 56..71 score
None	No IPR available	SEG	seg	seg	coord: 47..64 score
None	No IPR available	SEG	seg	seg	coord: 30..41 score
None	No IPR available	SEG	seg	seg	coord: 24..37 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR394849 ID=GR394849; Name=GR394849; organism=Cicer arietinum; type=EST; length=369bp
AGGATCAAAATGACTTGTTTTTTTACCATTCCATTAAGTAAAAAATTGTT
TTTTTATCCCCTAAAAAACTAATGGAATTAATCCCTGGTTTAAAACATGT
TAACATGGATGCTAGCAGTTTTGAAAAATTTACAAATGGGACAAATGGGA
AAATTGGAGCCCCAAACAGTGCATAAACAGAGATGTCTACAAGGGAAAAT
CAACACACACGATTCATCTTTCCCACAGTTACTGCACATTTTCATCCTAT
CAACAAAACTGCTTCCATTTCCATTTCCACTATCACCACAACCACCACTC
TTTCTCATCATGGTCACTGCTTCTGCGTTGTTGTTACCATTATCCGGGAA
ATTGCGCCATTCACCATCA

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