GR406304

EST Overview


Name	GR406304
Unique Name	GR406304
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	182

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR406304 vs. SwissProt
Match: YUID_BACSU (Uncharacterized membrane protein yuiD OS=Bacillus subtilis GN=yuiD PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.409e-9
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLI 177
            IKV + F V RK D  L+ S+GGMPSSHSA  TAL+T VA+ HG+  SLF V   F++I
Sbjct:   22 IKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVALEHGLDSSLFAVSAIFAVI 80

[Close]

BLAST of GR406304 vs. TrEMBL
Match: B9GR15_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_755397 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.015e-24
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            +KVFLNFFV+RKWDLRLL +SGGMPSSHSALCTALTTSVA CHGVADSLFPVCLGFSLIV
Sbjct:   47 MKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVAFCHGVADSLFPVCLGFSLIV 106

[Close]

BLAST of GR406304 vs. TrEMBL
Match: B9SBH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0718380 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.857e-24
Identity = 54/59 (91.53%), Postives = 57/59 (96.61%), Query Frame = 1

Query:    4 KVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            KV LNFFV+RKWDLRLL +SGGMPSSHSALCTALTTSVA+CHGVADSLFPVCLGFSLIV
Sbjct:  165 KVILNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIV 223

[Close]

BLAST of GR406304 vs. TrEMBL
Match: D7UCT5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027149001 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.466e-23
Identity = 51/60 (85.00%), Postives = 58/60 (96.67%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            +KV LNFFV+RKWDLR++ +SGGMPSSH+ALCTALTTSVA+CHGVADSLFPVCLGFSLIV
Sbjct:  124 VKVVLNFFVERKWDLRIMFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLIV 183

[Close]

BLAST of GR406304 vs. TrEMBL
Match: A5B2T6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024312 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.466e-23
Identity = 51/60 (85.00%), Postives = 58/60 (96.67%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            +KV LNFFV+RKWDLR++ +SGGMPSSH+ALCTALTTSVA+CHGVADSLFPVCLGFSLIV
Sbjct:   57 VKVVLNFFVERKWDLRIMFASGGMPSSHTALCTALTTSVALCHGVADSLFPVCLGFSLIV 116

[Close]

BLAST of GR406304 vs. TrEMBL
Match: Q9M361_ARATH (Putative uncharacterized protein F15G16.160 OS=Arabidopsis thaliana GN=F15G16.160 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.610e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = 1

Query:    4 KVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            K+ +NFF++RKWD RLL +SGGMPSSHSALC ALTTSVA+CHGVADSLFPVCLGFSLIV
Sbjct:   70 KMVINFFIERKWDFRLLYASGGMPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLIV 128

[Close]

BLAST of GR406304 vs. TrEMBL
Match: Q8RXV2_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At3g61770 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.610e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = 1

Query:    4 KVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            K+ +NFF++RKWD RLL +SGGMPSSHSALC ALTTSVA+CHGVADSLFPVCLGFSLIV
Sbjct:  157 KMVINFFIERKWDFRLLYASGGMPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLIV 215

[Close]

BLAST of GR406304 vs. TrEMBL
Match: D7LSP1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907735 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.610e-22
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = 1

Query:    4 KVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            K+ +NFF++RKWD RLL +SGGMPSSHSALC ALTTSVA+CHGVADSLFPVCLGFSLIV
Sbjct:  158 KMVINFFIERKWDFRLLYASGGMPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLIV 216

[Close]

BLAST of GR406304 vs. TrEMBL
Match: Q0DGG2_ORYSJ (Os05g0534100 protein OS=Oryza sativa subsp. japonica GN=Os05g0534100 PE=4 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.517e-20
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 1

Query:    4 KVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            KV L  FV+R+WDLR+L SSGGMPSSH+ALCTALT SVA+CHGV+DSLFPVCLGF+LIV
Sbjct:  142 KVVLTSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGFTLIV 200

[Close]

BLAST of GR406304 vs. TrEMBL
Match: B9FHA8_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_19332 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.517e-20
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 1

Query:    4 KVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            KV L  FV+R+WDLR+L SSGGMPSSH+ALCTALT SVA+CHGV+DSLFPVCLGF+LIV
Sbjct:  142 KVVLTSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGFTLIV 200

[Close]

BLAST of GR406304 vs. TrEMBL
Match: A2Y6V5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20760 PE=4 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.517e-20
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 1

Query:    4 KVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            KV L  FV+R+WDLR+L SSGGMPSSH+ALCTALT SVA+CHGV+DSLFPVCLGF+LIV
Sbjct:  142 KVVLTSFVERRWDLRMLFSSGGMPSSHTALCTALTASVALCHGVSDSLFPVCLGFTLIV 200

[Close]

BLAST of GR406304 vs. TAIR peptide
Match: AT3G61770.1 (| Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr3:22864635-22866248 FORWARD LENGTH=284)

HSP 1 Score: 107.842 bits (268), Expect = 1.374e-24
Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = 1

Query:    4 KVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            K+ +NFF++RKWD RLL +SGGMPSSHSALC ALTTSVA+CHGVADSLFPVCLGFSLIV
Sbjct:  157 KMVINFFIERKWDFRLLYASGGMPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLIV 215

[Close]

BLAST of GR406304 vs. TAIR peptide
Match: AT1G67600.1 (| Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr1:25336701-25337455 REVERSE LENGTH=163)

HSP 1 Score: 57.3806 bits (137), Expect = 2.129e-9
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            IK F +++ +R+WDL+ L  SGGMPSSHSA  TAL  +V +  G   S F + L  + IV
Sbjct:   34 IKFFTSWYKERRWDLKRLVGSGGMPSSHSATVTALALAVGLQEGFGGSHFAIALVLTTIV 93

[Close]

BLAST of GR406304 vs. TAIR peptide
Match: AT1G24350.3 (| Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr1:8639098-8640313 REVERSE LENGTH=186)

HSP 1 Score: 56.6102 bits (135), Expect = 3.632e-9
Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            IK+F +++ +R+WDL+ L  SGGMPSSHSA  TAL  ++ +  G   S F + L  + +V
Sbjct:   38 IKLFTSWYRERRWDLKQLIGSGGMPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVV 97

[Close]

BLAST of GR406304 vs. TAIR peptide
Match: AT1G24350.2 (| Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr1:8639407-8640313 REVERSE LENGTH=147)

HSP 1 Score: 56.6102 bits (135), Expect = 3.632e-9
Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            IK+F +++ +R+WDL+ L  SGGMPSSHSA  TAL  ++ +  G   S F + L  + +V
Sbjct:   38 IKLFTSWYRERRWDLKQLIGSGGMPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVV 97

[Close]

BLAST of GR406304 vs. TAIR peptide
Match: AT1G24350.1 (| Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr1:8639098-8640313 REVERSE LENGTH=168)

HSP 1 Score: 56.6102 bits (135), Expect = 3.632e-9
Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            IK+F +++ +R+WDL+ L  SGGMPSSHSA  TAL  ++ +  G   S F + L  + +V
Sbjct:   38 IKLFTSWYRERRWDLKQLIGSGGMPSSHSATVTALAVAIGLQEGFGGSHFAIALILASVV 97

[Close]

BLAST of GR406304 vs. TAIR peptide
Match: AT3G21610.1 (| Symbols: | Acid phosphatase/vanadium-dependent haloperoxidase-related protein | chr3:7609377-7610601 REVERSE LENGTH=174)

HSP 1 Score: 53.9138 bits (128), Expect = 2.354e-8
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 1

Query:    1 IKVFLNFFVDRKWDLRLLCSSGGMPSSHSALCTALTTSVAICHGVADSLFPVCLGFSLIV 180
            +KVF N++ +++WD + + SSGGMPSSHSA  TAL  ++    G     F + +  + +V
Sbjct:   49 LKVFTNWYKEKRWDSKRMISSGGMPSSHSATVTALAVAIGFEEGAGAPAFAIAVVLACVV 108

The following BLAST results are available for this feature:

BLAST of GR406304 vs. SwissProt
BLAST of GR406304 vs. TrEMBL
BLAST of GR406304 vs. TAIR peptide

BLAST of GR406304 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
YUID_BACSU	1.409e-9	55.93	Uncharacterized membrane protein yuiD OS=Bacillus ...	[more]

BLAST of GR406304 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9GR15_POPTR	1.015e-24	91.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SBH7_RICCO	3.857e-24	91.53	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7UCT5_VITVI	1.466e-23	85.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5B2T6_VITVI	1.466e-23	85.00	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q9M361_ARATH	3.610e-22	83.05	Putative uncharacterized protein F15G16.160 OS=Ara...	[more]
Q8RXV2_ARATH	3.610e-22	83.05	Putative uncharacterized protein OS=Arabidopsis th...	[more]
D7LSP1_ARALY	3.610e-22	83.05	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q0DGG2_ORYSJ	1.517e-20	79.66	Os05g0534100 protein OS=Oryza sativa subsp. japoni...	[more]
B9FHA8_ORYSJ	1.517e-20	79.66	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A2Y6V5_ORYSI	1.517e-20	79.66	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GR406304 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT3G61770.1	1.374e-24	83.05	\| Symbols: \| Acid phosphatase/vanadium-dependent ...	[more]
AT1G67600.1	2.129e-9	46.67	\| Symbols: \| Acid phosphatase/vanadium-dependent ...	[more]
AT1G24350.3	3.632e-9	43.33	\| Symbols: \| Acid phosphatase/vanadium-dependent ...	[more]
AT1G24350.2	3.632e-9	43.33	\| Symbols: \| Acid phosphatase/vanadium-dependent ...	[more]
AT1G24350.1	3.632e-9	43.33	\| Symbols: \| Acid phosphatase/vanadium-dependent ...	[more]
AT3G21610.1	2.354e-8	38.33	\| Symbols: \| Acid phosphatase/vanadium-dependent ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003832	Acid phosphatase/vanadium-dependent haloperoxidase-related	PFAM	PF02681	DUF212	coord: 1..60 score: 5.2

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406304 ID=GR406304; Name=GR406304; organism=Cicer arietinum; type=EST; length=182bp
ATAAAAGTTTTCTTGAATTTCTTTGTAGATAGGAAGTGGGATTTGAGGCT
ATTGTGTTCTTCTGGAGGAATGCCTTCTTCTCACTCAGCACTATGCACTG
CTCTCACCACTTCTGTTGCTATCTGTCATGGAGTTGCTGATTCACTATTT
CCTGTTTGTTTGGGTTTTAGTCTTATTGTTAT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR003832	DUF212

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