GR420627

EST Overview
NameGR420627
Unique NameGR420627
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length470
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of GR420627 vs. TrEMBL
Match: C9YEF0_9BURK (Putative uncharacterized protein OS=Curvibacter putative symbiont of Hydra magnipapillata GN=Csp_D29560 PE=4 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 6.508e-8
Identity = 56/151 (37.09%), Postives = 66/151 (43.71%), Query Frame = -2 
Query:   20 LSVDYEYLA----SPHVQTGFLVSRPMEDGLVVPKGFA*YHRIRGYHPLWLLFLSIRRGFFTITYRLIPFRSPLG*FTLGISXXXXXXXXXXXXXASHTYVT*----KAGFPLQ*VMIRKSADQSVFAHFIASYPAANVLHRL*SPRHPPH 448
            LSV+ EYLA     P  +  F     +    V  + F     +RGYHPLW  F         IT RL+ FRSPL   +  +S             ASH YV        GFP     IRKS DQS+FA         +VL RL  PRHPPH
Sbjct:   20 LSVNDEYLALEDGPPIFRQDFSCPALLFASSVPHRSF----HVRGYHPLWPAFPGCSVMSCAITCRLLRFRSPLLSESRLMSFPRATEMFQFTRFASHDYVFIMRYLSVGFP-----IRKSPDQSLFASSPKLIAGYHVLRRLSLPRHPPH 161
[Close]
BLAST of GR420627 vs. TrEMBL
Match: B3D9S8_BURM1 (Putative uncharacterized protein OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=BMULJ_05093 PE=4 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 1.425e-7
Identity = 23/33 (69.70%), Postives = 25/33 (75.76%), Query Frame = -1 
Query:  168 QAHPISLATRLIYFGNLFSCSYLDVSVRRVRFT 266
            +AHPISLAT L    + FSC YLDVSV RVRFT
Sbjct:   88 KAHPISLATTLGISVDFFSCGYLDVSVHRVRFT 120

HSP 2 Score: 33.113 bits (74), Expect = 1.425e-7
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = -3 
Query:  361 PPMFRQDFSCPALW--RMVLSY 420
            PP+FRQDF+CPAL    +VLSY
Sbjct:   40 PPIFRQDFTCPALLVVHLVLSY 61
The following BLAST results are available for this feature:
BLAST of GR420627 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
C9YEF0_9BURK6.508e-837.09Putative uncharacterized protein OS=Curvibacter pu... [more]
B3D9S8_BURM11.425e-769.70Putative uncharacterized protein OS=Burkholderia m... [more]
back to top
Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420627 ID=GR420627; Name=GR420627; organism=Cicer arietinum; type=EST; length=470bp
CACAGGGACAAGTGAATAAGTGTGGCGGATGCCTTGGCGATTACAGGCGA
TGAAGGACGTTGGCTGCGGGGTAGCTTGCGATAAAGTGAGCAAACACACT
TTGATCCGCAGATTTCCGAATCATCACTCACTGAAGGGGAAACCCGGCCT
TTTAGGTTACATAGGTGTGTGAAGCGAACGCGGCGAACTGAAACATCTAA
GTAGCTGCAGGAAAAGAGATTCCCAAAGTAAATCAACCGAGTGGCGAGCG
AAATGGGATGAGCCTGTACGTGATAGTGAAGAATCCTCTGCGAATTGATA
GAAATAGGAGCCATAGCGGGTGATAGCCCCGTATTCGGTGGTACTAAGCA
AATCCTTTCGGTACGACAAGACCATCCTCCATAGGGCGGGACACGAGAAA
TCCTGTCTGAACATGGGGGGAGGCTAAATACTCGTAATCGACCGACAGTA
CCGTGAAAAAAATAGTGAAC
back to top