HO062496
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO062496 vs. SwissProt
Match: RCCR_ARATH (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=RCCR PE=1 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 4.852e-51 Identity = 95/178 (53.37%), Postives = 136/178 (76.40%), Query Frame = -2 Query: 12 GTSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRE---LGEEDR 536 G+++ SLHIR G+ SP+DFV+GSW+H ++PTG SL+ITS+S +LNSS APNFV ELI+SS L+L+LDLP RKDLVL PDYLK +Y+DT LD+HRQ+L K+ EV PY++ SLF+R+ SPTA ++I E + ++++EI+R+ + P +K+VL +WL+ C + E +GEE+R Sbjct: 98 GSAEASLHIRSGDKSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEEE--DKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEER 273
BLAST of HO062496 vs. SwissProt
Match: RCCR_HORVU (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.160e-34 Identity = 67/158 (42.41%), Postives = 108/158 (68.35%), Query Frame = -2 Query: 12 MDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEEDR 485 +DF++ S +H ++P G ++DITSL LN+S DAP+F+ E I+ SPT ++++LDL PRKDL L P+Y++ +YEDT++D R+ +E++ + +PY++ SLF+R+ SPTA+F I G ++EI+ + + K +L IWLD CA E+ E +R Sbjct: 1 IDFMLQSSLHCKVPNG-AIDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKDLALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKGGEGTLEEIVHGHLASVVKGILQIWLDTCASDASEMEEGER 157
BLAST of HO062496 vs. TrEMBL
Match: C6TJC3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.905e-78 Identity = 140/177 (79.10%), Postives = 161/177 (90.96%), Query Frame = -2 Query: 3 TSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEEDRAYV 533 T+Q SLHIR + DSP+DFV+GSWVH+ELPTGGSLDITSLSAYLNSS DAPNFVFE+IRSSPTML+L+LDLPPRKDLVLWPD LKTFYEDT+LD HRQ LE+V EVQPY +SSL+IRTV+SPTAI VR+ TEN G ERM+EIIR+ ++PISKQVLGIWLDHCACAKRE+GE +RAY+ Sbjct: 104 TAQASLHIRAAHNDSPIDFVLGSWVHSELPTGGSLDITSLSAYLNSSTDAPNFVFEMIRSSPTMLLLILDLPPRKDLVLWPDDLKTFYEDTQLDKHRQTLERVPEVQPYFSSSLYIRTVSSPTAIMVRVLTENGGVERMEEIIRDHLDPISKQVLGIWLDHCACAKREVGEAERAYL 280
BLAST of HO062496 vs. TrEMBL
Match: C6TDC0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.905e-78 Identity = 140/177 (79.10%), Postives = 162/177 (91.53%), Query Frame = -2 Query: 3 TSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEEDRAYV 533 T+Q SLHIRP + DS +DFV+GSWVH+ELPTGGSLDITSLSAYLNSS DAPNFVFE+IRSSPTML+L+LDLPPRKDLVLWPD LKTFYEDT+LD HRQAL++V EVQPY +SSL+IRTV+SPTAI VRI TEN G ERM+EIIR+ ++PISKQVLGIWLDHCACAKR++GE +RAY+ Sbjct: 111 TAQASLHIRPAHNDSQIDFVLGSWVHSELPTGGSLDITSLSAYLNSSTDAPNFVFEMIRSSPTMLVLILDLPPRKDLVLWPDDLKTFYEDTQLDKHRQALDRVPEVQPYFSSSLYIRTVSSPTAIMVRILTENGGVERMEEIIRDHLDPISKQVLGIWLDHCACAKRQVGEAERAYL 287
BLAST of HO062496 vs. TrEMBL
Match: D7SVY1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022135001 PE=4 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.122e-62 Identity = 110/178 (61.80%), Postives = 146/178 (82.02%), Query Frame = -2 Query: 3 GTSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEEDRAYV 536 GT+Q +LH+R G+ SP+DFV+GSW+H +LP+GG+L+ITSLS YLN S DAPNF+ ELIRSSPT L+L+LDLPPRKDL L PDYL+TFYEDTKL++ RQ LEK+ E QPY +SSL+IR + SPTAI RI+TE G ERM+EI+++ + P++ +VLGIWLD CA +RE+G+ + +Y+ Sbjct: 104 GTAQATLHVRSGHDSSPIDFVLGSWIHCQLPSGGALNITSLSTYLNPSTDAPNFLIELIRSSPTSLVLILDLPPRKDLALHPDYLQTFYEDTKLESRRQLLEKIPESQPYFSSSLYIRCIVSPTAIMTRIETEAGGVERMEEILQSHVGPVAMEVLGIWLDQCAFGEREVGDSEISYL 281
BLAST of HO062496 vs. TrEMBL
Match: A9PG24_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_764544 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 3.264e-62 Identity = 110/178 (61.80%), Postives = 148/178 (83.15%), Query Frame = -2 Query: 3 GTSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEEDRAYV 536 G++Q SLHIR G S +DF++GSW+H +LPTGG+L+ITSLSAYLN S DAPNF+ ELI+SSPT L+ +LDLPPRKD VL PDYL+TFYE+T+LDTHRQ L K+ EVQPY++SSL++R+V SPT + ++I + G ERM+EI++N I+P +++VLGIWLDHCA +R +GEE++AY+ Sbjct: 57 GSAQASLHIRSGLQSSQVDFILGSWLHCKLPTGGALNITSLSAYLNPSTDAPNFMIELIQSSPTSLVFILDLPPRKDPVLSPDYLQTFYENTQLDTHRQMLAKLPEVQPYVSSSLYLRSVLSPTVVMIQIGAQAGGPERMEEIVKNHIDPTAQEVLGIWLDHCARGERLVGEEEKAYM 234
BLAST of HO062496 vs. TrEMBL
Match: B9SC57_RICCO (Red chlorophyll catabolite reductase, chloroplast, putative OS=Ricinus communis GN=RCOM_1407700 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.240e-61 Identity = 105/178 (58.99%), Postives = 146/178 (82.02%), Query Frame = -2 Query: 3 GTSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEEDRAYV 536 G +Q + HIR N +SP+DF++GSW+H +LPTG +L+ITSLSAYLN S DAPNF+ ELI+SSPT L+L++DLPPRKDLVL+PDYL+TFYE+++L+ HRQ L+K+ EVQPY+TSSL++R+ SPTAI + ++TE RM+EII++ + P++K V G+WLD CAC RE+ EE++AY+ Sbjct: 94 GNAQAAFHIRSANQNSPVDFILGSWLHCKLPTGAALNITSLSAYLNLSTDAPNFLIELIQSSPTSLVLIIDLPPRKDLVLYPDYLQTFYENSQLEAHRQTLQKLKEVQPYVTSSLYLRSFLSPTAIMILVETEAGESGRMEEIIKDQVGPVAKAVFGVWLDKCACGGREVEEEEKAYL 271
BLAST of HO062496 vs. TrEMBL
Match: A5BUH1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028662 PE=4 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 2.859e-58 Identity = 104/168 (61.90%), Postives = 138/168 (82.14%), Query Frame = -2 Query: 3 PGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEEDRAYV 506 PG+T + +DFV+GSW+H +LP+GG+L+ITSLS YLN S DAPNF+ ELIRSSPT L+L+LDLPPRKDL L PDYL+TFYEDTKL++ RQ LEK+ E QPY +SSL+IR + SPTA RI+TE G ERM+EI+++ + P++K+VLGIWLD CA +RE+G+ + +Y+ Sbjct: 151 PGSTLNKIDFVLGSWIHCQLPSGGALNITSLSTYLNPSTDAPNFLIELIRSSPTSLVLILDLPPRKDLALHPDYLQTFYEDTKLESRRQLLEKIPESQPYFSSSLYIRCIVSPTAXMTRIETEAGGVERMEEILQSHVGPVAKEVLGIWLDQCAFGEREVGDSEISYL 318
BLAST of HO062496 vs. TrEMBL
Match: A9YTW5_TOBAC (Putative red chlorophyll catabolite reductase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.129e-57 Identity = 107/173 (61.85%), Postives = 138/173 (79.77%), Query Frame = -2 Query: 15 TSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEED 533 T+ SL++R G++ S +DF++GSWVH LPTGG+L+ITSLSAYL S DAPNF+ E+IRSSPT LIL+LDLPPRKDLV PDYLKTFYE+T+LD RQ LEK+ EV+PY +SSL+IR V SP+AI V I+TE R+DEII++ I P++K +L WLD CACA+R+L E++ Sbjct: 96 TAHASLYVRSGHSSSQVDFILGSWVHCNLPTGGALNITSLSAYLRPSTDAPNFLIEVIRSSPTSLILILDLPPRKDLVQHPDYLKTFYEETQLDEQRQLLEKLPEVKPYFSSSLYIRAVVSPSAILVSIETEASQAVRIDEIIQDHISPVAKVMLETWLDLCACAERKLTEDE 268
BLAST of HO062496 vs. TrEMBL
Match: D1MWY7_CITLA (Red chlorophyll catabolite reductase OS=Citrullus lanatus subsp. vulgaris GN=CitRCCR PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.124e-54 Identity = 98/175 (56.00%), Postives = 139/175 (79.43%), Query Frame = -2 Query: 12 GTSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEEDR 536 GTS+ +L +R G+ DS ++F++ SW+H++LPTG SL+I SLSAYL S DAPNF+ E I+SSPT LIL+LD+PPRKD VL PDYL+ FYEDT+LDT+R+ +E++ E +PY+ SSL+ R++ SPT+I R+ TE+ G ERM+EII+N I P+++ VL +WL+ CAC +RE+G +R Sbjct: 94 GTSEGALLVRSGSPDSSINFILASWLHSQLPTGASLNIASLSAYLRPSTDAPNFLIEFIQSSPTSLILILDMPPRKDPVLNPDYLQLFYEDTRLDTYRKTIEELPETRPYVMSSLYFRSLVSPTSIISRVDTESGGPERMEEIIKNHIGPVARDVLQVWLNECACKEREVGMVER 268
BLAST of HO062496 vs. TrEMBL
Match: Q1ELT8_SOLLC (Red chlorophyll catabolite reductase (Fragment) OS=Solanum lycopersicum GN=rccr PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.469e-54 Identity = 101/173 (58.38%), Postives = 135/173 (78.03%), Query Frame = -2 Query: 15 TSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRELGEED 533 T+ SL++R GN+ S +DF++GSWVH LPTGG+L+ITSLS YL S DAPNF+ E+I+SSPT LIL+LDLPPRKDLV PDYLKTFYE+T+LD RQ LEK+ EV+PY +SSL+IR + SP+AI V I+T+ R+DEII++ I P++K +L WL+ CAC +R L +++ Sbjct: 95 TAHASLYVRSGNSSSQVDFILGSWVHCNLPTGGALNITSLSVYLRPSTDAPNFLIEVIQSSPTTLILILDLPPRKDLVQHPDYLKTFYEETQLDKQRQLLEKLPEVKPYFSSSLYIRALVSPSAILVSIETDPSQAIRIDEIIQDHISPVAKVMLDTWLNLCACTERRLTDDE 267
BLAST of HO062496 vs. TrEMBL
Match: Q1ELT7_BRANA (Red chlorophyll catabolite reductase (Fragment) OS=Brassica napus GN=rccr PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 5.580e-54 Identity = 103/178 (57.87%), Postives = 140/178 (78.65%), Query Frame = -2 Query: 12 GTSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCA---CAKRELGEEDR 536 G+++ SLHIR G SP+DFV+GSW+H ++PTG SL+ITS+SA+LNSS +APNFV ELI+SSPT L+L+LDLP RKDLV PDYL+TFY+DT LDTHRQ+L K+ E++PY + SLF+R+ SPTA ++I E GER++EI+R+ + P +KQVL +WL+ CA KR +GEE++ Sbjct: 77 GSAEASLHIRSGEQSSPIDFVIGSWIHVKIPTGVSLNITSISAFLNSSTEAPNFVVELIQSSPTSLVLILDLPHRKDLVRHPDYLQTFYQDTALDTHRQSLLKLPEIKPYDSPSLFVRSAFSPTASMLKIDAEE--GERLEEILRDHVSPAAKQVLEVWLERCAKEEGEKRVVGEEEK 252
BLAST of HO062496 vs. TAIR peptide
Match: AT4G37000.1 (| Symbols: ACD2, ATRCCR | accelerated cell death 2 (ACD2) | chr4:17442627-17443762 FORWARD LENGTH=319) HSP 1 Score: 200.29 bits (508), Expect = 5.301e-52 Identity = 95/178 (53.37%), Postives = 136/178 (76.40%), Query Frame = -2 Query: 12 GTSQVSLHIRPGNTDSPMDFVMGSWVHAELPTGGSLDITSLSAYLNSSNDAPNFVFELIRSSPTMLILVLDLPPRKDLVLWPDYLKTFYEDTKLDTHRQALEKVNEVQPYITSSLFIRTVASPTAIFVRIQTENDGGERMDEIIRNDIEPISKQVLGIWLDHCACAKRE---LGEEDR 536 G+++ SLHIR G+ SP+DFV+GSW+H ++PTG SL+ITS+S +LNSS APNFV ELI+SS L+L+LDLP RKDLVL PDYLK +Y+DT LD+HRQ+L K+ EV PY++ SLF+R+ SPTA ++I E + ++++EI+R+ + P +K+VL +WL+ C + E +GEE+R Sbjct: 98 GSAEASLHIRSGDKSSPIDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEEE--DKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEER 273 The following BLAST results are available for this feature:
BLAST of HO062496 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 2
BLAST of HO062496 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO062496 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO062496 ID=HO062496; Name=HO062496; organism=Cicer arietinum; type=EST; length=537bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|