GR393287

EST Overview
NameGR393287
Unique NameGR393287
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length336
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR393287 vs. TrEMBL
Match: D7SQN4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_134.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000400001 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.830e-34
Identity = 74/111 (66.67%), Postives = 86/111 (77.48%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335
            S +AC+HL++N KFPSK+ VQALIS+QSKLKNLLH T    S  + +S C  SS   +G KD + EQ+VLYAG  DI  DNE+LRAHLQGMQWRVMELEK CRKMQTQMAK
Sbjct:  416 SSEACMHLAQNTKFPSKTTVQALISQQSKLKNLLHETNH--SRSFTDSPCSISSNGSRGAKDDSQEQIVLYAGKLDISADNERLRAHLQGMQWRVMELEKACRKMQTQMAK 524          
BLAST of GR393287 vs. TrEMBL
Match: B9HE61_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_654565 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.510e-31
Identity = 72/111 (64.86%), Postives = 85/111 (76.58%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335
            S +AC+HLS+NK+FPSKSAVQAL+S+Q KLK+LL AT       Y +S  G S   +KGKK++ SEQ+VLYAG  D   +NEKLRAHLQGMQWRV ELEKIC KMQTQM K
Sbjct:  324 SAEACIHLSQNKRFPSKSAVQALMSQQVKLKSLLKATDK--MKCYIDSPSGVSEIGRKGKKNEASEQIVLYAGKLDPPTNNEKLRAHLQGMQWRVTELEKICLKMQTQMTK 432          
BLAST of GR393287 vs. TrEMBL
Match: B9RPM7_RICCO (Root phototropism protein, putative OS=Ricinus communis GN=RCOM_1545860 PE=4 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.149e-28
Identity = 65/111 (58.56%), Postives = 82/111 (73.87%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335
            S +AC+HLS+NK+F S++A QAL S+Q KLK+LL  T+   S  Y  S C       KGK ++TSEQ+VL+AG  ++  D+EKLRAHLQGMQ RVMELEK+CRKMQTQM K
Sbjct:  414 SAEACIHLSQNKRFSSRTAAQALRSQQLKLKSLLQGTSN--SRRYGSSPCSFDEIENKGKTNETSEQIVLFAGKLELSTDSEKLRAHLQGMQTRVMELEKVCRKMQTQMTK 522          
BLAST of GR393287 vs. TrEMBL
Match: B9MXU2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_782145 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.566e-20
Identity = 55/111 (49.55%), Postives = 66/111 (59.46%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335
            S +AC+HLS+NK FPSK AVQALI   SK                             GKK++TS+Q+VL AG  D+  DN+KLRAHLQGMQWRV ELE++C KMQ  M K
Sbjct:  414 SAEACIHLSQNKNFPSKCAVQALIETGSK-----------------------------GKKNETSKQIVLCAGKLDLPTDNDKLRAHLQGMQWRVTELERVCMKMQAPMTK 495          
BLAST of GR393287 vs. TrEMBL
Match: D7U6H1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_361.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006403001 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.839e-18
Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALI-SEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSE--QLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQM 329
            SP+A  HL++N K PS++A +A+I S+Q+KLK+LL     P + P  +    +S  + +G KDK  +  Q++L+    ++  +NE+LRAHLQGMQWRV+ELEK C+ MQT+M
Sbjct:  411 SPEALRHLARNSKLPSRAAAKAVITSQQTKLKSLL-----PNTHPLKDFSYSASCYTIEGSKDKKGDLDQILLHVRKIELSTENERLRAHLQGMQWRVIELEKACKGMQTRM 517          
BLAST of GR393287 vs. TrEMBL
Match: A5B1C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004813 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.839e-18
Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALI-SEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSE--QLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQM 329
            SP+A  HL++N K PS++A +A+I S+Q+KLK+LL     P + P  +    +S  + +G KDK  +  Q++L+    ++  +NE+LRAHLQGMQWRV+ELEK C+ MQT+M
Sbjct:  409 SPEALRHLARNSKLPSRAAAKAVITSQQTKLKSLL-----PNTHPLKDFSYSASCYTIEGSKDKKGDXDQILLHVRKIELSTENERLRAHLQGMQWRVIELEKACKGMQTRM 515          
BLAST of GR393287 vs. TrEMBL
Match: A2YMD4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26389 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.248e-16
Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKD-----KTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335
            SP+ C HL++N  FP+++AVQAL S+ + LK+LL         P       S++  + G +D         Q+VLYAG  D+  +++ LR+ L GM WRVMELEK+C +M+TQM+K
Sbjct:  427 SPECCKHLARNAGFPTRAAVQALASQHTVLKSLLRG-----GGPDEHLRPVSAAKHRAGGEDHDDLVSAGGQVVLYAGRLDLSLESQNLRSLLDGMHWRVMELEKVCSRMKTQMSK 537          
BLAST of GR393287 vs. TrEMBL
Match: Q7XIJ3_ORYSJ (Os07g0546400 protein OS=Oryza sativa subsp. japonica GN=OJ1612_A04.108 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.935e-16
Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDK-----TSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335
            SP+ C HL++N  FP+++AVQAL S+ + LK+LL         P       S++  + G +D         Q+VLYAG  D+  +++ LR+ L GM WRVMELEK+C +M+TQM+K
Sbjct:  333 SPECCKHLARNAGFPTRAAVQALASQHTVLKSLLRG-----GGPDEHLRPVSAAKHRAGGEDHDDLVAAGGQVVLYAGRLDLSLESQNLRSLLDGMHWRVMELEKVCSRMKTQMSK 443          
BLAST of GR393287 vs. TrEMBL
Match: A3BKW1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24643 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.935e-16
Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDK-----TSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335
            SP+ C HL++N  FP+++AVQAL S+ + LK+LL         P       S++  + G +D         Q+VLYAG  D+  +++ LR+ L GM WRVMELEK+C +M+TQM+K
Sbjct:  428 SPECCKHLARNAGFPTRAAVQALASQHTVLKSLLRG-----GGPDEHLRPVSAAKHRAGGEDHDDLVAAGGQVVLYAGRLDLSLESQNLRSLLDGMHWRVMELEKVCSRMKTQMSK 538          
BLAST of GR393287 vs. TrEMBL
Match: B6UD16_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.686e-14
Identity = 42/116 (36.21%), Postives = 71/116 (61.21%), Query Frame = 3
Query:    3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKD-----KTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335
            SP+ C H+ +N +FP+ +AVQAL S+ + LK+++      + +  + S   S+   + G  D     +   Q++LYA   D+  +N+ LR+ L GM WRV+ELEK+C +M+T+M+K
Sbjct:   30 SPECCKHMLRNGEFPTTAAVQALASQHTVLKSVVLREPGQLKS-VSPSPTASTGKRRDGYDDDNGGGENDGQVILYARRLDLSVENQNLRSLLDGMHWRVVELEKVCSRMKTRMSK 144          
BLAST of GR393287 vs. TAIR peptide
Match: AT3G22104.1 (| Symbols: | Phototropic-responsive NPH3 family protein | chr3:7789814-7792179 FORWARD LENGTH=506)

HSP 1 Score: 56.6102 bits (135), Expect = 3.649e-9
Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 3
Query:  171 QKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQM 329
            Q+ ++ +  +QL+L     +   +NEKL+ H++G+QWRVMELE+ C KMQ QM
Sbjct:  431 QQQQQQQQQKQLILRMEKVETSGENEKLKEHIEGIQWRVMELERACLKMQNQM 483          
The following BLAST results are available for this feature:
BLAST of GR393287 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SQN4_VITVI1.830e-3466.67Whole genome shotgun sequence of line PN40024, sca... [more]
B9HE61_POPTR5.510e-3164.86Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RPM7_RICCO1.149e-2858.56Root phototropism protein, putative OS=Ricinus com... [more]
B9MXU2_POPTR2.566e-2049.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U6H1_VITVI1.839e-1845.54Whole genome shotgun sequence of line PN40024, sca... [more]
A5B1C6_VITVI1.839e-1845.54Putative uncharacterized protein OS=Vitis vinifera... [more]
A2YMD4_ORYSI2.248e-1641.38Putative uncharacterized protein OS=Oryza sativa s... [more]
Q7XIJ3_ORYSJ2.935e-1641.38Os07g0546400 protein OS=Oryza sativa subsp. japoni... [more]
A3BKW1_ORYSJ2.935e-1641.38Putative uncharacterized protein OS=Oryza sativa s... [more]
B6UD16_MAIZE4.686e-1436.21Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GR393287 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G22104.13.649e-945.28| Symbols: | Phototropic-responsive NPH3 family p... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 6..10
score: NAcoord: 18..35
score
NoneNo IPR availableSEGsegsegcoord: 37..51
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR393287 ID=GR393287; Name=GR393287; organism=Cicer arietinum; type=EST; length=336bp
TATCACCTCAAGCATGCCTACACCTTTCTAAGAACAAAAAGTTTCCATCA
AAATCAGCAGTTCAGGCTCTCATATCTGAACAATCTAAGCTAAAAAATTT
ACTCCATGCTACTACTACTCCTATTTCAACTCCATACAATGAATCTCTGT
GTGGTTCTAGTAGTGCTTCTCAAAAGGGTAAAAAAGACAAAACAAGTGAA
CAACTCGTGTTGTATGCTGGTAATTTTGATATTCAACCTGATAATGAGAA
ACTTAGAGCACATTTGCAAGGAATGCAATGGAGGGTTATGGAGTTAGAGA
AAATCTGTAGGAAAATGCAAACTCAGATGGCTAAGA
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