GR393287
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR393287 vs. TrEMBL
Match: D7SQN4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_134.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000400001 PE=4 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.830e-34 Identity = 74/111 (66.67%), Postives = 86/111 (77.48%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335 S +AC+HL++N KFPSK+ VQALIS+QSKLKNLLH T S + +S C SS +G KD + EQ+VLYAG DI DNE+LRAHLQGMQWRVMELEK CRKMQTQMAK Sbjct: 416 SSEACMHLAQNTKFPSKTTVQALISQQSKLKNLLHETNH--SRSFTDSPCSISSNGSRGAKDDSQEQIVLYAGKLDISADNERLRAHLQGMQWRVMELEKACRKMQTQMAK 524
BLAST of GR393287 vs. TrEMBL
Match: B9HE61_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_654565 PE=4 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.510e-31 Identity = 72/111 (64.86%), Postives = 85/111 (76.58%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335 S +AC+HLS+NK+FPSKSAVQAL+S+Q KLK+LL AT Y +S G S +KGKK++ SEQ+VLYAG D +NEKLRAHLQGMQWRV ELEKIC KMQTQM K Sbjct: 324 SAEACIHLSQNKRFPSKSAVQALMSQQVKLKSLLKATDK--MKCYIDSPSGVSEIGRKGKKNEASEQIVLYAGKLDPPTNNEKLRAHLQGMQWRVTELEKICLKMQTQMTK 432
BLAST of GR393287 vs. TrEMBL
Match: B9RPM7_RICCO (Root phototropism protein, putative OS=Ricinus communis GN=RCOM_1545860 PE=4 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.149e-28 Identity = 65/111 (58.56%), Postives = 82/111 (73.87%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335 S +AC+HLS+NK+F S++A QAL S+Q KLK+LL T+ S Y S C KGK ++TSEQ+VL+AG ++ D+EKLRAHLQGMQ RVMELEK+CRKMQTQM K Sbjct: 414 SAEACIHLSQNKRFSSRTAAQALRSQQLKLKSLLQGTSN--SRRYGSSPCSFDEIENKGKTNETSEQIVLFAGKLELSTDSEKLRAHLQGMQTRVMELEKVCRKMQTQMTK 522
BLAST of GR393287 vs. TrEMBL
Match: B9MXU2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_782145 PE=4 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.566e-20 Identity = 55/111 (49.55%), Postives = 66/111 (59.46%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335 S +AC+HLS+NK FPSK AVQALI SK GKK++TS+Q+VL AG D+ DN+KLRAHLQGMQWRV ELE++C KMQ M K Sbjct: 414 SAEACIHLSQNKNFPSKCAVQALIETGSK-----------------------------GKKNETSKQIVLCAGKLDLPTDNDKLRAHLQGMQWRVTELERVCMKMQAPMTK 495
BLAST of GR393287 vs. TrEMBL
Match: D7U6H1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_361.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006403001 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.839e-18 Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALI-SEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSE--QLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQM 329 SP+A HL++N K PS++A +A+I S+Q+KLK+LL P + P + +S + +G KDK + Q++L+ ++ +NE+LRAHLQGMQWRV+ELEK C+ MQT+M Sbjct: 411 SPEALRHLARNSKLPSRAAAKAVITSQQTKLKSLL-----PNTHPLKDFSYSASCYTIEGSKDKKGDLDQILLHVRKIELSTENERLRAHLQGMQWRVIELEKACKGMQTRM 517
BLAST of GR393287 vs. TrEMBL
Match: A5B1C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004813 PE=4 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.839e-18 Identity = 51/112 (45.54%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALI-SEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSE--QLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQM 329 SP+A HL++N K PS++A +A+I S+Q+KLK+LL P + P + +S + +G KDK + Q++L+ ++ +NE+LRAHLQGMQWRV+ELEK C+ MQT+M Sbjct: 409 SPEALRHLARNSKLPSRAAAKAVITSQQTKLKSLL-----PNTHPLKDFSYSASCYTIEGSKDKKGDXDQILLHVRKIELSTENERLRAHLQGMQWRVIELEKACKGMQTRM 515
BLAST of GR393287 vs. TrEMBL
Match: A2YMD4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26389 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.248e-16 Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKD-----KTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335 SP+ C HL++N FP+++AVQAL S+ + LK+LL P S++ + G +D Q+VLYAG D+ +++ LR+ L GM WRVMELEK+C +M+TQM+K Sbjct: 427 SPECCKHLARNAGFPTRAAVQALASQHTVLKSLLRG-----GGPDEHLRPVSAAKHRAGGEDHDDLVSAGGQVVLYAGRLDLSLESQNLRSLLDGMHWRVMELEKVCSRMKTQMSK 537
BLAST of GR393287 vs. TrEMBL
Match: Q7XIJ3_ORYSJ (Os07g0546400 protein OS=Oryza sativa subsp. japonica GN=OJ1612_A04.108 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.935e-16 Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDK-----TSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335 SP+ C HL++N FP+++AVQAL S+ + LK+LL P S++ + G +D Q+VLYAG D+ +++ LR+ L GM WRVMELEK+C +M+TQM+K Sbjct: 333 SPECCKHLARNAGFPTRAAVQALASQHTVLKSLLRG-----GGPDEHLRPVSAAKHRAGGEDHDDLVAAGGQVVLYAGRLDLSLESQNLRSLLDGMHWRVMELEKVCSRMKTQMSK 443
BLAST of GR393287 vs. TrEMBL
Match: A3BKW1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24643 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.935e-16 Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDK-----TSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335 SP+ C HL++N FP+++AVQAL S+ + LK+LL P S++ + G +D Q+VLYAG D+ +++ LR+ L GM WRVMELEK+C +M+TQM+K Sbjct: 428 SPECCKHLARNAGFPTRAAVQALASQHTVLKSLLRG-----GGPDEHLRPVSAAKHRAGGEDHDDLVAAGGQVVLYAGRLDLSLESQNLRSLLDGMHWRVMELEKVCSRMKTQMSK 538
BLAST of GR393287 vs. TrEMBL
Match: B6UD16_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.686e-14 Identity = 42/116 (36.21%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 3 SPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKD-----KTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAK 335 SP+ C H+ +N +FP+ +AVQAL S+ + LK+++ + + + S S+ + G D + Q++LYA D+ +N+ LR+ L GM WRV+ELEK+C +M+T+M+K Sbjct: 30 SPECCKHMLRNGEFPTTAAVQALASQHTVLKSVVLREPGQLKS-VSPSPTASTGKRRDGYDDDNGGGENDGQVILYARRLDLSVENQNLRSLLDGMHWRVVELEKVCSRMKTRMSK 144
BLAST of GR393287 vs. TAIR peptide
Match: AT3G22104.1 (| Symbols: | Phototropic-responsive NPH3 family protein | chr3:7789814-7792179 FORWARD LENGTH=506) HSP 1 Score: 56.6102 bits (135), Expect = 3.649e-9 Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 3 Query: 171 QKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQM 329 Q+ ++ + +QL+L + +NEKL+ H++G+QWRVMELE+ C KMQ QM Sbjct: 431 QQQQQQQQQKQLILRMEKVETSGENEKLKEHIEGIQWRVMELERACLKMQNQM 483 The following BLAST results are available for this feature:
BLAST of GR393287 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR393287 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR393287 ID=GR393287; Name=GR393287; organism=Cicer arietinum; type=EST; length=336bpback to top |