FE672790

EST Overview
NameFE672790
Unique NameFE672790
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length112
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
[Close]
BLAST of FE672790 vs. TrEMBL
Match: B9RFB9_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1433520 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.267e-7
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 2 
Query:    2 AMHCPHCRKIDMCRWL*ATGCRS*TEFNMDDWTRDED 112
            AM CP+CRKI+  +WL A GCRS  EF+MDDW  DED
Sbjct:   71 AMQCPNCRKIEKGQWLYANGCRSLPEFSMDDWAHDED 107
[Close]
BLAST of FE672790 vs. TrEMBL
Match: B9I7H8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_240561 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.267e-7
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 2 
Query:    2 AMHCPHCRKIDMCRWL*ATGCRS*TEFNMDDWTRDED 112
            AM CP+CRKI+  +WL A GCRS  EF+MDDW  DED
Sbjct:   61 AMQCPNCRKIEKGQWLYANGCRSLPEFSMDDWAHDED 97
[Close]
BLAST of FE672790 vs. TrEMBL
Match: B9N4J3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837174 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.266e-7
Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 2 
Query:    2 AMHCPHCRKIDMCRWL*ATGCRS*TEFNMDDWTRDED 112
            AM CP+CRKI+  +WL A GCRS  EF MDDW  DED
Sbjct:   72 AMQCPNCRKIEKGQWLYANGCRSLPEFTMDDWAHDED 108
[Close]
BLAST of FE672790 vs. TAIR peptide
Match: AT3G05545.1 (| Symbols: | RING/U-box superfamily protein | chr3:1609436-1612133 FORWARD LENGTH=425)

HSP 1 Score: 53.5286 bits (127), Expect = 3.134e-8
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 2 
Query:    5 MHCPHCRKIDMCRWL*ATGCRS*TEFNMDDWTRDED 112
            M CP+CRK++  +WL A GCRS  EFN++DW  +ED
Sbjct:   76 MQCPNCRKVEKGQWLYANGCRSYPEFNVEDWVHEED 111
The following BLAST results are available for this feature:
BLAST of FE672790 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
B9RFB9_RICCO3.267e-764.86DNA binding protein, putative OS=Ricinus communis ... [more]
B9I7H8_POPTR3.267e-764.86Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9N4J3_POPTR4.266e-764.86Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of FE672790 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G05545.13.134e-855.56| Symbols: | RING/U-box superfamily protein | chr... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE672790 ID=FE672790; Name=FE672790; organism=Cicer arietinum; type=EST; length=112bp
AGCAATGCACTGCCCTCATTGTAGGAAGATTGACATGTGTCGTTGGCTTT
AGGCCACCGGCTGTCGGTCATAGACAGAATTCAATATGGATGACTGGACG
CGTGATGAGGAC
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