GR401523

EST Overview


Name	GR401523
Unique Name	GR401523
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	417

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28

Homology

[Close]

BLAST of GR401523 vs. TrEMBL
Match: B7FIY0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.762e-24
Identity = 52/56 (92.86%), Postives = 53/56 (94.64%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DKN +SIKPIMESTYG DSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHF FKKK
Sbjct:  303 DKNKTSIKPIMESTYGKDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFLFKKK 358

[Close]

BLAST of GR401523 vs. TrEMBL
Match: B9INF4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825621 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.521e-22
Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            D+N+++IKPIMESTYG D A KWTVYWRTFFIAVAELFGYNNGEEWMVAHF F KK
Sbjct:  300 DRNLAAIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVAHFLFNKK 355

[Close]

BLAST of GR401523 vs. TrEMBL
Match: A7TDC6_NEMVE (Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g155968 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.521e-22
Identity = 47/56 (83.93%), Postives = 51/56 (91.07%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            D+N+++IKPIMESTYG D A KWTVYWRTFFIAVAELFGYNNGEEWMVAHF F KK
Sbjct:   29 DRNLAAIKPIMESTYGKDQAVKWTVYWRTFFIAVAELFGYNNGEEWMVAHFLFNKK 84

[Close]

BLAST of GR401523 vs. TrEMBL
Match: Q5Z7K6_ORYSJ (Putative coclaurine N-methyltransferase OS=Oryza sativa subsp. japonica GN=OSJNBa0006A22.36 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.523e-20
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DKN++SI+PI E TYG +SATKW  YWRTFFI+VAELFGYNNG+EWMVAHF F+KK
Sbjct:  304 DKNITSIRPIFEKTYGKESATKWIAYWRTFFISVAELFGYNNGDEWMVAHFLFRKK 359

[Close]

BLAST of GR401523 vs. TrEMBL
Match: Q0DBD6_ORYSJ (Os06g0574100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0574100 PE=4 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.523e-20
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DKN++SI+PI E TYG +SATKW  YWRTFFI+VAELFGYNNG+EWMVAHF F+KK
Sbjct:   24 DKNITSIRPIFEKTYGKESATKWIAYWRTFFISVAELFGYNNGDEWMVAHFLFRKK 79

[Close]

BLAST of GR401523 vs. TrEMBL
Match: B9FTV5_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_21767 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.523e-20
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DKN++SI+PI E TYG +SATKW  YWRTFFI+VAELFGYNNG+EWMVAHF F+KK
Sbjct:  304 DKNITSIRPIFEKTYGKESATKWIAYWRTFFISVAELFGYNNGDEWMVAHFLFRKK 359

[Close]

BLAST of GR401523 vs. TrEMBL
Match: B8B3V7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23454 PE=4 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.523e-20
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DKN++SI+PI E TYG +SATKW  YWRTFFI+VAELFGYNNG+EWMVAHF F+KK
Sbjct:  305 DKNITSIRPIFEKTYGKESATKWIAYWRTFFISVAELFGYNNGDEWMVAHFLFRKK 360

[Close]

BLAST of GR401523 vs. TrEMBL
Match: D7STT3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00035424001 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.296e-20
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = -3

Query:  251 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKK 415
            DKN++SIKPIMESTYG DSA KWTVYWRTFFI+VAELF YN+GEEWMVA F FKK
Sbjct:  300 DKNLASIKPIMESTYGKDSAVKWTVYWRTFFISVAELFEYNDGEEWMVALFLFKK 354

[Close]

BLAST of GR401523 vs. TrEMBL
Match: A5AQ51_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012142 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.296e-20
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = -3

Query:  251 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKK 415
            DKN++SIKPIMESTYG DSA KWTVYWRTFFI+VAELF YN+GEEWMVA F FKK
Sbjct:  272 DKNLASIKPIMESTYGKDSAVKWTVYWRTFFISVAELFEYNDGEEWMVALFLFKK 326

[Close]

BLAST of GR401523 vs. TrEMBL
Match: D7MAF8_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_658658 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-19
Identity = 44/56 (78.57%), Postives = 47/56 (83.93%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DK + +IK IME TYG + A KW VYWRTFFIAVAELFGYNNGEEWMVAHF FKKK
Sbjct:   33 DKEIVAIKEIMEVTYGKEEAVKWMVYWRTFFIAVAELFGYNNGEEWMVAHFLFKKK 88

[Close]

BLAST of GR401523 vs. TAIR peptide
Match: AT4G33110.2 (| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:15972497-15974531 REVERSE LENGTH=355)

HSP 1 Score: 97.4413 bits (241), Expect = 2.801e-21
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DK + ++K IME TYG + A KW VYWRTFFIAVAELFGYNNGEEWMVAHF FKKK
Sbjct:  300 DKEIVAVKKIMEVTYGKEEAVKWMVYWRTFFIAVAELFGYNNGEEWMVAHFLFKKK 355

[Close]

BLAST of GR401523 vs. TAIR peptide
Match: AT4G33110.1 (| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:15972497-15974531 REVERSE LENGTH=355)

HSP 1 Score: 97.4413 bits (241), Expect = 2.801e-21
Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DK + ++K IME TYG + A KW VYWRTFFIAVAELFGYNNGEEWMVAHF FKKK
Sbjct:  300 DKEIVAVKKIMEVTYGKEEAVKWMVYWRTFFIAVAELFGYNNGEEWMVAHFLFKKK 355

[Close]

BLAST of GR401523 vs. TAIR peptide
Match: AT4G33120.1 (| Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:15975577-15978055 REVERSE LENGTH=355)

HSP 1 Score: 94.7449 bits (234), Expect = 1.815e-20
Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = -3

Query:  248 DKNMSSIKPIMESTYGIDSATKWTVYWRTFFIAVAELFGYNNGEEWMVAHFFFKKK 415
            DK + ++K IME TYG + A KWTVYWRTFFIA+AELF YNNG+EWM+AHF FKKK
Sbjct:  300 DKEIVAVKEIMEVTYGKEEAVKWTVYWRTFFIALAELFAYNNGDEWMIAHFLFKKK 355

The following BLAST results are available for this feature:

BLAST of GR401523 vs. TrEMBL
BLAST of GR401523 vs. TAIR peptide

BLAST of GR401523 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FIY0_MEDTR	3.762e-24	92.86	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9INF4_POPTR	3.521e-22	83.93	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A7TDC6_NEMVE	3.521e-22	83.93	Predicted protein (Fragment) OS=Nematostella vecte...	[more]
Q5Z7K6_ORYSJ	2.523e-20	76.79	Putative coclaurine N-methyltransferase OS=Oryza s...	[more]
Q0DBD6_ORYSJ	2.523e-20	76.79	Os06g0574100 protein (Fragment) OS=Oryza sativa su...	[more]
B9FTV5_ORYSJ	2.523e-20	76.79	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8B3V7_ORYSI	2.523e-20	76.79	Putative uncharacterized protein OS=Oryza sativa s...	[more]
D7STT3_VITVI	3.296e-20	83.64	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AQ51_VITVI	3.296e-20	83.64	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7MAF8_ARALY	3.644e-19	78.57	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]

BLAST of GR401523 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G33110.2	2.801e-21	76.79	\| Symbols: \| S-adenosyl-L-methionine-dependent me...	[more]
AT4G33110.1	2.801e-21	76.79	\| Symbols: \| S-adenosyl-L-methionine-dependent me...	[more]
AT4G33120.1	1.815e-20	71.43	\| Symbols: \| S-adenosyl-L-methionine-dependent me...	[more]

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR401523 ID=GR401523; Name=GR401523; organism=Cicer arietinum; type=EST; length=417bp
ATAAATTTTGTTCATTCACCTTCATTTTCAACTACAAAGGCCATTTGGCA
TTGATCTCTGGTGATATTTATTTTCCAAGTGAAAACTCACTTTATCACAA
AAACATAGGCAGACAACCAAATAAAACTAGTTTATCAATAAAGTATACAA
TAAATATTGAAGTATTCAGCCTCGTTGAATTGTTTGTTCCCTTTTAAATC
CATACTCAAATCGCAAACCAAGAAAAAAATGATTCCGGCTTTCTTCATTT
CTTTTTGAAAAAAAAGTGTGCAACCATCCATTCTTCCCCGTTATTGTATC
CAAAAAGTTCTGCTACAGCTATGAAAAATGTTCTCCAATAAACAGTCCAT
TTAGTAGCTGAATCTATGCCATATGTTGATTCCATAATTGGCTTGATGGA
ACTCATGTTCTTATCCA

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