GR916502

EST Overview
NameGR916502
Unique NameGR916502
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length239
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR916502 vs. TrEMBL
Match: B9SC73_RICCO (RNA-binding protein, putative OS=Ricinus communis GN=RCOM_1408480 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.436e-17
Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 2
Query:   11 GRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199
            GR    GY AYN+YISA+T RYAALGAPTLYD+P  +YG GEP RG+ KKIFVGRLP EAT E
Sbjct:  177 GRMAHGGYGAYNAYISAAT-RYAALGAPTLYDHPGPMYGTGEPARGVGKKIFVGRLPQEATPE 238          
BLAST of GR916502 vs. TrEMBL
Match: B9HHC2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832343 PE=4 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.686e-16
Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 2
Query:    8 SGRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199
            +GR    GY AYN+YISA+T RYAALGAPTLYD+P   YGRGE  RGM KKIFVGRLP EA+ E
Sbjct:  175 NGRMAPGGYGAYNAYISAAT-RYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASAE 237          
BLAST of GR916502 vs. TrEMBL
Match: C6TGH4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.202e-16
Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 2
Query:   17 PGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199
            P   GY AYN+YISA+T RYAALGAPTLYD P  IYGRG+P R   KKIFVGRLPPEAT++
Sbjct:   35 PTLGGYGAYNAYISAAT-RYAALGAPTLYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATSD 94          
BLAST of GR916502 vs. TrEMBL
Match: B9H6G5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_651076 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.202e-16
Identity = 45/62 (72.58%), Postives = 49/62 (79.03%), Query Frame = 2
Query:   14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199
            R    GY AYN+YISA+T RYAALGAPTLYD+P   YGRGE  RGM KKIFVGRLP EA+TE
Sbjct:  177 RTAPGGYGAYNAYISAAT-RYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASTE 237          
BLAST of GR916502 vs. TrEMBL
Match: B7FL75_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.756e-16
Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 2
Query:   29 GYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199
            GY AYN+YIS +T RYAALGAPTLYD+P  IYGRGEP R + KKIFVGRLPPEA +E
Sbjct:  184 GYGAYNAYISTAT-RYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRLPPEANSE 239          
BLAST of GR916502 vs. TrEMBL
Match: D7SVX4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022126001 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.406e-16
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 2
Query:   14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199
            R  + GY AYN+YI+A+T RYAALGAPTLYD+P S+YGRGE  R M KKIFVGRLP EA+ E
Sbjct:  178 RVPQGGYGAYNAYITAAT-RYAALGAPTLYDHPGSVYGRGESTRAMGKKIFVGRLPQEASAE 238          
BLAST of GR916502 vs. TrEMBL
Match: A5BFC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011315 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.406e-16
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 2
Query:   14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199
            R  + GY AYN+YI+A+T RYAALGAPTLYD+P S+YGRGE  R M KKIFVGRLP EA+ E
Sbjct:  171 RVPQGGYGAYNAYITAAT-RYAALGAPTLYDHPGSVYGRGESTRAMGKKIFVGRLPQEASAE 231          
BLAST of GR916502 vs. TrEMBL
Match: B6T9S2_MAIZE (Heterogeneous nuclear ribonucleoprotein 27C OS=Zea mays PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.515e-14
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 2
Query:   14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRG--EPVRGMCKKIFVGRLPPEATTE 199
            RP + GY AYN+YISA+T RYA LGAPTLYD+P S YGRG   P + + KKIFVGRLP EA T+
Sbjct:  179 RPSQGGYGAYNAYISAAT-RYATLGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTD 241          
BLAST of GR916502 vs. TrEMBL
Match: B4FE67_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.515e-14
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 2
Query:   14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRG--EPVRGMCKKIFVGRLPPEATTE 199
            RP + GY AYN+YISA+T RYA LGAPTLYD+P S YGRG   P + + KKIFVGRLP EA T+
Sbjct:  179 RPSQGGYGAYNAYISAAT-RYATLGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTD 241          
BLAST of GR916502 vs. TrEMBL
Match: Q94AC3_ARATH (AT4g36960/C7A10_400 OS=Arabidopsis thaliana GN=At4g36960 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.831e-14
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   11 GRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEP-VRGMCKKIFVGRLPPEATTE 199
            G PG  GY AY++YISA+T RYAALGAPTLYD P++ YGRGEP  RG+  KIFVGRLP EA+ +
Sbjct:  194 GAPG--GYGAYDAYISAAT-RYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVD 254          
BLAST of GR916502 vs. TAIR peptide
Match: AT4G36960.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:17427349-17429589 FORWARD LENGTH=379)

HSP 1 Score: 80.1073 bits (196), Expect = 3.029e-16
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   11 GRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEP-VRGMCKKIFVGRLPPEATTE 199
            G PG  GY AY++YISA+T RYAALGAPTLYD P++ YGRGEP  RG+  KIFVGRLP EA+ +
Sbjct:  194 GAPG--GYGAYDAYISAAT-RYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVD 254          
BLAST of GR916502 vs. TAIR peptide
Match: AT4G36960.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:17427349-17429589 FORWARD LENGTH=379)

HSP 1 Score: 80.1073 bits (196), Expect = 3.029e-16
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 2
Query:   11 GRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEP-VRGMCKKIFVGRLPPEATTE 199
            G PG  GY AY++YISA+T RYAALGAPTLYD P++ YGRGEP  RG+  KIFVGRLP EA+ +
Sbjct:  194 GAPG--GYGAYDAYISAAT-RYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVD 254          
The following BLAST results are available for this feature:
BLAST of GR916502 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SC73_RICCO4.436e-1771.43RNA-binding protein, putative OS=Ricinus communis ... [more]
B9HHC2_POPTR1.686e-1670.31Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6TGH4_SOYBN2.202e-1672.13Putative uncharacterized protein OS=Glycine max PE... [more]
B9H6G5_POPTR2.202e-1672.58Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B7FL75_MEDTR3.756e-1675.44Putative uncharacterized protein OS=Medicago trunc... [more]
D7SVX4_VITVI6.406e-1669.35Whole genome shotgun sequence of line PN40024, sca... [more]
A5BFC4_VITVI6.406e-1669.35Putative uncharacterized protein OS=Vitis vinifera... [more]
B6T9S2_MAIZE3.515e-1465.63Heterogeneous nuclear ribonucleoprotein 27C OS=Zea... [more]
B4FE67_MAIZE3.515e-1465.63Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q94AC3_ARATH7.831e-1467.19AT4g36960/C7A10_400 OS=Arabidopsis thaliana GN=At4... [more]
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BLAST of GR916502 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G36960.23.029e-1667.19| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT4G36960.13.029e-1667.19| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10432RNA-BINDING PROTEINcoord: 1..63
score: 0.0
NoneNo IPR availablePANTHERPTHR10432:SF9RNA-BINDING PROTEINcoord: 1..63
score: 0.0

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR916502 ID=GR916502; Name=GR916502; organism=Cicer arietinum; type=EST; length=239bp
GATTTCGAGCGGCCGCCCGGGCAGGTCAGGATATGTTGCATATAATTCAT
ATATTTCTGCATCGACGACTAGATATGCAGCACTTGGTGCTCCTACTTTG
TATGATTATCCCAGTTCAATTTATGGAAGAGGAGAACCTGTTCGTGGAAT
GTGCAAAAAGATTTTTGTTGGCCGTCTTCCCCCTGAGGCAACCACTGAGN
GNAATCTNTCCCGCCCCTGGGTATTTTTTGGAAAGAATT
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