GR916502
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR916502 vs. TrEMBL
Match: B9SC73_RICCO (RNA-binding protein, putative OS=Ricinus communis GN=RCOM_1408480 PE=4 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.436e-17 Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 11 GRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199 GR GY AYN+YISA+T RYAALGAPTLYD+P +YG GEP RG+ KKIFVGRLP EAT E Sbjct: 177 GRMAHGGYGAYNAYISAAT-RYAALGAPTLYDHPGPMYGTGEPARGVGKKIFVGRLPQEATPE 238
BLAST of GR916502 vs. TrEMBL
Match: B9HHC2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832343 PE=4 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.686e-16 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 2 Query: 8 SGRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199 +GR GY AYN+YISA+T RYAALGAPTLYD+P YGRGE RGM KKIFVGRLP EA+ E Sbjct: 175 NGRMAPGGYGAYNAYISAAT-RYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASAE 237
BLAST of GR916502 vs. TrEMBL
Match: C6TGH4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.202e-16 Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 2 Query: 17 PGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199 P GY AYN+YISA+T RYAALGAPTLYD P IYGRG+P R KKIFVGRLPPEAT++ Sbjct: 35 PTLGGYGAYNAYISAAT-RYAALGAPTLYDQPGPIYGRGDPSRRTSKKIFVGRLPPEATSD 94
BLAST of GR916502 vs. TrEMBL
Match: B9H6G5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_651076 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.202e-16 Identity = 45/62 (72.58%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199 R GY AYN+YISA+T RYAALGAPTLYD+P YGRGE RGM KKIFVGRLP EA+TE Sbjct: 177 RTAPGGYGAYNAYISAAT-RYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASTE 237
BLAST of GR916502 vs. TrEMBL
Match: B7FL75_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.756e-16 Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 2 Query: 29 GYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199 GY AYN+YIS +T RYAALGAPTLYD+P IYGRGEP R + KKIFVGRLPPEA +E Sbjct: 184 GYGAYNAYISTAT-RYAALGAPTLYDHPGPIYGRGEPRRRISKKIFVGRLPPEANSE 239
BLAST of GR916502 vs. TrEMBL
Match: D7SVX4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022126001 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.406e-16 Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199 R + GY AYN+YI+A+T RYAALGAPTLYD+P S+YGRGE R M KKIFVGRLP EA+ E Sbjct: 178 RVPQGGYGAYNAYITAAT-RYAALGAPTLYDHPGSVYGRGESTRAMGKKIFVGRLPQEASAE 238
BLAST of GR916502 vs. TrEMBL
Match: A5BFC4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011315 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.406e-16 Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 2 Query: 14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEPVRGMCKKIFVGRLPPEATTE 199 R + GY AYN+YI+A+T RYAALGAPTLYD+P S+YGRGE R M KKIFVGRLP EA+ E Sbjct: 171 RVPQGGYGAYNAYITAAT-RYAALGAPTLYDHPGSVYGRGESTRAMGKKIFVGRLPQEASAE 231
BLAST of GR916502 vs. TrEMBL
Match: B6T9S2_MAIZE (Heterogeneous nuclear ribonucleoprotein 27C OS=Zea mays PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.515e-14 Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 2 Query: 14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRG--EPVRGMCKKIFVGRLPPEATTE 199 RP + GY AYN+YISA+T RYA LGAPTLYD+P S YGRG P + + KKIFVGRLP EA T+ Sbjct: 179 RPSQGGYGAYNAYISAAT-RYATLGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTD 241
BLAST of GR916502 vs. TrEMBL
Match: B4FE67_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.515e-14 Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 2 Query: 14 RPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRG--EPVRGMCKKIFVGRLPPEATTE 199 RP + GY AYN+YISA+T RYA LGAPTLYD+P S YGRG P + + KKIFVGRLP EA T+ Sbjct: 179 RPSQGGYGAYNAYISAAT-RYATLGAPTLYDHPGSAYGRGYYGPSQAVGKKIFVGRLPQEANTD 241
BLAST of GR916502 vs. TrEMBL
Match: Q94AC3_ARATH (AT4g36960/C7A10_400 OS=Arabidopsis thaliana GN=At4g36960 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.831e-14 Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 11 GRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEP-VRGMCKKIFVGRLPPEATTE 199 G PG GY AY++YISA+T RYAALGAPTLYD P++ YGRGEP RG+ KIFVGRLP EA+ + Sbjct: 194 GAPG--GYGAYDAYISAAT-RYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVD 254
BLAST of GR916502 vs. TAIR peptide
Match: AT4G36960.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:17427349-17429589 FORWARD LENGTH=379) HSP 1 Score: 80.1073 bits (196), Expect = 3.029e-16 Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 11 GRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEP-VRGMCKKIFVGRLPPEATTE 199 G PG GY AY++YISA+T RYAALGAPTLYD P++ YGRGEP RG+ KIFVGRLP EA+ + Sbjct: 194 GAPG--GYGAYDAYISAAT-RYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVD 254
BLAST of GR916502 vs. TAIR peptide
Match: AT4G36960.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:17427349-17429589 FORWARD LENGTH=379) HSP 1 Score: 80.1073 bits (196), Expect = 3.029e-16 Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 2 Query: 11 GRPGRSGYVAYNSYISASTTRYAALGAPTLYDYPSSIYGRGEP-VRGMCKKIFVGRLPPEATTE 199 G PG GY AY++YISA+T RYAALGAPTLYD P++ YGRGEP RG+ KIFVGRLP EA+ + Sbjct: 194 GAPG--GYGAYDAYISAAT-RYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGRLPQEASVD 254 The following BLAST results are available for this feature:
BLAST of GR916502 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR916502 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR916502 ID=GR916502; Name=GR916502; organism=Cicer arietinum; type=EST; length=239bpback to top |