HO063017
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO063017 vs. SwissProt
Match: RL39_ORYSJ (60S ribosomal protein L39 OS=Oryza sativa subsp. japonica GN=RPL39 PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 6.674e-25 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. SwissProt
Match: RL39_MAIZE (60S ribosomal protein L39 OS=Zea mays GN=RPL39 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 6.674e-25 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. SwissProt
Match: RL391_ARATH (60S ribosomal protein L39-1 OS=Arabidopsis thaliana GN=RPL39A PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 2.374e-22 Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHK+F IKKKL KKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. SwissProt
Match: RL392_ARATH (60S ribosomal protein L39-2 OS=Arabidopsis thaliana GN=RPL39B PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.428e-21 Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHK+F IKKKL KKMRQNRPIP WIR+RTDN IRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. SwissProt
Match: RL39_SPOFR (60S ribosomal protein L39 OS=Spodoptera frugiperda GN=RpL39 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.079e-18 Identity = 40/49 (81.63%), Postives = 45/49 (91.84%), Query Frame = -3 Query: 204 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 350 M +HKTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL Sbjct: 1 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 49
BLAST of HO063017 vs. SwissProt
Match: RL39_PLUXY (60S ribosomal protein L39 OS=Plutella xylostella GN=RpL39 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.079e-18 Identity = 40/49 (81.63%), Postives = 45/49 (91.84%), Query Frame = -3 Query: 204 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKL 350 M +HKTF IK+KLAKK++QNRPIP W+RMRT NTIRYNAKRRHWRRTKL Sbjct: 1 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKL 49
BLAST of HO063017 vs. SwissProt
Match: RL39_RAT (60S ribosomal protein L39 OS=Rattus norvegicus GN=Rpl39 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 6.050e-18 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3 Query: 201 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 350 M SHKTFRIK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
BLAST of HO063017 vs. SwissProt
Match: RL39_MOUSE (60S ribosomal protein L39 OS=Mus musculus GN=Rpl39 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 6.050e-18 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3 Query: 201 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 350 M SHKTFRIK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
BLAST of HO063017 vs. SwissProt
Match: RL39_ICTPU (60S ribosomal protein L39 OS=Ictalurus punctatus GN=rpl39 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.050e-18 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3 Query: 201 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 350 M SHKTFRIK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG Sbjct: 1 MASHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
BLAST of HO063017 vs. SwissProt
Match: RL39_HUMAN (60S ribosomal protein L39 OS=Homo sapiens GN=RPL39 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 6.050e-18 Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = -3 Query: 201 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLG 350 M SHKTFRIK+ LAKK +QNRPIP WIRM+T N IRYN+KRRHWRRTKLG Sbjct: 1 MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLG 50
BLAST of HO063017 vs. TrEMBL
Match: Q6KAJ8_ORYSJ (Putative 60S ribosomal protein L39 OS=Oryza sativa subsp. japonica GN=OJ1004_E04.27 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.098e-23 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 68 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 118
BLAST of HO063017 vs. TrEMBL
Match: Q0DWT0_ORYSJ (Os02g0797200 protein OS=Oryza sativa subsp. japonica GN=Os02g0797200 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.098e-23 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. TrEMBL
Match: C5XUH6_SORBI (Putative uncharacterized protein Sb04g036030 OS=Sorghum bicolor GN=Sb04g036030 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.098e-23 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. TrEMBL
Match: B6SP00_MAIZE (60S ribosomal protein L39 OS=Zea mays PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.098e-23 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. TrEMBL
Match: A2XAK5_ORYSI (60S ribosomal protein l39 OS=Oryza sativa subsp. indica GN=OsI_09286 PE=4 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.098e-23 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. TrEMBL
Match: D7T537_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_149.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001055001 PE=4 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.872e-23 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = -3 Query: 198 SKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356 SKMPSHKTF IKKKLAKKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 20 SKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 72
BLAST of HO063017 vs. TrEMBL
Match: D7T535_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_149.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00001053001 PE=4 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.872e-23 Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = -3 Query: 198 SKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 356 SKMPSHKTF IKKKLAKKMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 18 SKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 70
BLAST of HO063017 vs. TrEMBL
Match: Q5SMI4_ORYSJ (60S ribosomal protein L39 OS=Oryza sativa subsp. japonica GN=OSJNBb0019L07.23 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.194e-23 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTF+IKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. TrEMBL
Match: A2YA08_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21918 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.194e-23 Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHKTF+IKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. TrEMBL
Match: Q0DWT2_ORYSJ (Os02g0796900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0796900 PE=4 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.171e-23 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = -3 Query: 198 PSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 347 PSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 PSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 50
BLAST of HO063017 vs. TAIR peptide
Match: AT4G31985.1 (| Symbols: | Ribosomal protein L39 family protein | chr4:15469931-15470366 FORWARD LENGTH=51) HSP 1 Score: 104.375 bits (259), Expect = 2.855e-23 Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHK+F IKKKL KKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. TAIR peptide
Match: AT3G02190.1 (| Symbols: | Ribosomal protein L39 family protein | chr3:406005-406342 REVERSE LENGTH=51) HSP 1 Score: 100.523 bits (249), Expect = 4.122e-22 Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = -3 Query: 198 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 350 MPSHK+F IKKKL KKMRQNRPIP WIR+RTDN IRYNAKRRHWRRTKLGF Sbjct: 1 MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51
BLAST of HO063017 vs. TAIR peptide
Match: AT2G25210.1 (| Symbols: | Ribosomal protein L39 family protein | chr2:10740157-10740379 FORWARD LENGTH=44) HSP 1 Score: 90.8929 bits (224), Expect = 3.266e-19 Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = -3 Query: 198 IKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 326 IKKKL KKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF Sbjct: 2 IKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 44 The following BLAST results are available for this feature:
BLAST of HO063017 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of HO063017 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO063017 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO063017 ID=HO063017; Name=HO063017; organism=Cicer arietinum; type=EST; length=457bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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