HO066344

EST Overview


Name	HO066344
Unique Name	HO066344
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	326

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.867e-11
Identity = 33/34 (97.06%), Postives = 33/34 (97.06%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LKSAAGSISRLNANNAAALPGKC VNIPYKISTS
Sbjct:   75 LKSAAGSISRLNANNAAALPGKCVVNIPYKISTS 108

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.662e-11
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LKSAAGSI++LN NNAAALPGKCGVNIPYKISTS
Sbjct:   69 LKSAAGSITKLNTNNAAALPGKCGVNIPYKISTS 102

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.707e-10
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LKSAAGSI++LN NNAAALPGKCGVNIPYKIST+
Sbjct:   77 LKSAAGSITKLNTNNAAALPGKCGVNIPYKISTT 110

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.912e-10
Identity = 30/34 (88.24%), Postives = 33/34 (97.06%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LKSAAGSI++LN NNAAALPGKCGV+IPYKISTS
Sbjct:   77 LKSAAGSITKLNTNNAAALPGKCGVDIPYKISTS 110

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP5_LENCU (Non-specific lipid-transfer protein 5 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 6.486e-10
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            +KSAA SI++LN NNAAALPGKCGVNIPYKISTS
Sbjct:   76 MKSAASSITKLNTNNAAALPGKCGVNIPYKISTS 109

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.366e-9
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+ AGSIS +N NNAA LPGKCGVN+PYKISTS
Sbjct:   75 LKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTS 108

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.087e-8
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+AAG++  +N NNA ALPGKCGVNIPYKISTS
Sbjct:   51 LKAAAGAVRGINPNNAEALPGKCGVNIPYKISTS 84

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 2.725e-8
Identity = 27/34 (79.41%), Postives = 29/34 (85.29%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK  +GSIS +N NNAAALPGKCGVNIPYKIS S
Sbjct:   51 LKQLSGSISGVNPNNAAALPGKCGVNIPYKISAS 84

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.649e-8
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+AAG+I+ LN  NAAALPGKC VNIPYKIST+
Sbjct:   77 LKTAAGNINNLNPGNAAALPGKCNVNIPYKISTT 110

[Close]

BLAST of HO066344 vs. SwissProt
Match: NLTP1_PRUDO (Non-specific lipid-transfer protein 1 OS=Prunus domestica PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.353e-7
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK  +GSI  +N NNAAALPGKCGVN+PYKIS S
Sbjct:   51 LKQLSGSIPGVNPNNAAALPGKCGVNVPYKISAS 84

[Close]

BLAST of HO066344 vs. TrEMBL
Match: Q4PLT5_FRAAN (Non-specific lipid-transfer protein OS=Fragaria ananassa GN=LTP6 PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.369e-8
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LKSAAGSI  LNAN AA LPGKCGVN+PYKISTS
Sbjct:   77 LKSAAGSIKGLNANLAAGLPGKCGVNVPYKISTS 110

[Close]

BLAST of HO066344 vs. TrEMBL
Match: Q5J026_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=Mal d 3.01 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.864e-7
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+ AGSIS +N NNAA LPGKCGVN+PYKISTS
Sbjct:   75 LKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTS 108

[Close]

BLAST of HO066344 vs. TrEMBL
Match: Q5J011_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=Mal d 3.01 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.864e-7
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+ AGSIS +N NNAA LPGKCGVN+PYKISTS
Sbjct:   75 LKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTS 108

[Close]

BLAST of HO066344 vs. TrEMBL
Match: Q5GLH0_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=mald3 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.864e-7
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+ AGSIS +N NNAA LPGKCGVN+PYKISTS
Sbjct:   75 LKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTS 108

[Close]

BLAST of HO066344 vs. TrEMBL
Match: Q2V6D8_MALDO (Non-specific lipid-transfer protein OS=Malus domestica PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.864e-7
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+ AGSIS +N NNAA LPGKCGVN+PYKISTS
Sbjct:   75 LKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTS 108

[Close]

BLAST of HO066344 vs. TrEMBL
Match: B7VFP1_MALDO (Non-specific lipid-transfer protein (Fragment) OS=Malus domestica GN=mal d 3.01 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.864e-7
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+ AGSIS +N NNAA LPGKCGVN+PYKISTS
Sbjct:   48 LKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTS 81

[Close]

BLAST of HO066344 vs. TrEMBL
Match: B7VFP0_MALDO (Non-specific lipid-transfer protein (Fragment) OS=Malus domestica GN=mal d 3.01 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.864e-7
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+ AGSIS +N NNAA LPGKCGVN+PYKISTS
Sbjct:   48 LKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTS 81

[Close]

BLAST of HO066344 vs. TrEMBL
Match: Q45NK7_MEDSA (Non-specific lipid-transfer protein (Fragment) OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.435e-7
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKIST 127
            LKSAAG+IS LNA+ AA LPGKCGVNIPYKIST
Sbjct:   50 LKSAAGAISGLNASTAAGLPGKCGVNIPYKIST 82

[Close]

BLAST of HO066344 vs. TrEMBL
Match: D3W146_PHAVU (Non-specific lipid-transfer protein OS=Phaseolus vulgaris GN=Pha v 3.0101 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.435e-7
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+AAG++  LN NNA ALPGKCGVNIPYKISTS
Sbjct:   75 LKTAAGAVRGLNPNNAQALPGKCGVNIPYKISTS 108

[Close]

BLAST of HO066344 vs. TrEMBL
Match: B8Y6H9_9ROSI (Non-specific lipid-transfer protein OS=Castanea mollissima PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.425e-7
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 2

Query:   29 LKSAAGSISRLNANNAAALPGKCGVNIPYKISTS 130
            LK+AAGSIS L+  NAA+LPGKCGVN+PYKISTS
Sbjct:   78 LKTAAGSISGLSPANAASLPGKCGVNVPYKISTS 111

The following BLAST results are available for this feature:

BLAST of HO066344 vs. SwissProt
BLAST of HO066344 vs. TrEMBL

BLAST of HO066344 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
NLTP_CICAR	5.867e-11	97.06	Non-specific lipid-transfer protein OS=Cicer ariet...	[more]
NLTP4_LENCU	7.662e-11	91.18	Non-specific lipid-transfer protein 4 (Fragment) O...	[more]
NLTP2_LENCU	1.707e-10	88.24	Non-specific lipid-transfer protein 2 OS=Lens culi...	[more]
NLTP6_LENCU	2.912e-10	88.24	Non-specific lipid-transfer protein 6 OS=Lens culi...	[more]
NLTP5_LENCU	6.486e-10	85.29	Non-specific lipid-transfer protein 5 OS=Lens culi...	[more]
NLTP_MALDO	9.366e-9	79.41	Non-specific lipid-transfer protein OS=Malus domes...	[more]
NLTP1_PHAAU	2.087e-8	76.47	Non-specific lipid-transfer protein 1 OS=Phaseolus...	[more]
NLTP1_PRUAR	2.725e-8	79.41	Non-specific lipid-transfer protein 1 OS=Prunus ar...	[more]
NLTP3_LENCU	4.649e-8	76.47	Non-specific lipid-transfer protein 3 OS=Lens culi...	[more]
NLTP1_PRUDO	1.353e-7	73.53	Non-specific lipid-transfer protein 1 OS=Prunus do...	[more]

BLAST of HO066344 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q4PLT5_FRAAN	8.369e-8	85.29	Non-specific lipid-transfer protein OS=Fragaria an...	[more]
Q5J026_MALDO	1.864e-7	79.41	Non-specific lipid-transfer protein OS=Malus domes...	[more]
Q5J011_MALDO	1.864e-7	79.41	Non-specific lipid-transfer protein OS=Malus domes...	[more]
Q5GLH0_MALDO	1.864e-7	79.41	Non-specific lipid-transfer protein OS=Malus domes...	[more]
Q2V6D8_MALDO	1.864e-7	79.41	Non-specific lipid-transfer protein OS=Malus domes...	[more]
B7VFP1_MALDO	1.864e-7	79.41	Non-specific lipid-transfer protein (Fragment) OS=...	[more]
B7VFP0_MALDO	1.864e-7	79.41	Non-specific lipid-transfer protein (Fragment) OS=...	[more]
Q45NK7_MEDSA	2.435e-7	84.85	Non-specific lipid-transfer protein (Fragment) OS=...	[more]
D3W146_PHAVU	2.435e-7	79.41	Non-specific lipid-transfer protein OS=Phaseolus v...	[more]
B8Y6H9_9ROSI	5.425e-7	79.41	Non-specific lipid-transfer protein OS=Castanea mo...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 9..44 score
None	No IPR available	SEG	seg	seg	coord: 44..65 score
None	No IPR available	GENE3D	2.30.30.50	no description	coord: 52..68 score: 5.5
None	No IPR available	SEG	seg	seg	coord: 24..57 score
IPR003375	Photosystem I PsaE, reaction centre subunit IV	PFAM	PF02427	PSI_PsaE	coord: 52..68 score: 5.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO066344 ID=HO066344; Name=HO066344; organism=Cicer arietinum; type=EST; length=326bp
AGCGTGGTCGCGGCCGAGGTACGCGGGTTTGAAAAGTGCTGCTGGTTCTA
TTTCTCGTTTGAATGCTAACAATGCTGCTGCTCTCCCTGGCAAATGTGGT
GTTAACATTCCTTACAAGATTAGTACCAGTAGGATTCTTTCCTAAGAATC
TTCACCTTAGCACCTCTCTTGGGACCAATTGGAGGTGGCTTGGGTTTGGC
AGCTACTTCAGCATCGGCCGGAGGAGTGGCGGTAGCGGGTGCAGCGTCAT
CGGAGGCCCTGACAACAAGTCTAGAAGTAGCAATAGTGTTGGACTTTATA
GGGAACATCAACATGGTACCTGCCCG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009538	photosystem I reaction center

Vocabulary: **INTERPRO**
Term	Definition
IPR003375	PSI_PsaE

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