GR405801
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR405801 vs. TrEMBL
Match: B9GXF7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_554465 PE=4 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.021e-16 Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = -1 Query: 2 GSHIDPDKEEQLQGVKTDFEDKVKRVLKLIKDDTLEE-DGTPVELLEREPLAELVEDVPNQYQLLYAQYN 208 G+HIDP+K+EQL+ KT+ +DKVKR+LKLIK++ LEE DG VE ++EPL EL+EDV QY LLY QY+ Sbjct: 17 GTHIDPEKDEQLKETKTEIDDKVKRILKLIKEEDLEERDGLSVENSKKEPLLELIEDVQKQYHLLYGQYD 86
BLAST of GR405801 vs. TrEMBL
Match: D7TVD1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019499001 PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.526e-12 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = -1 Query: 2 FGSHIDPDKEEQLQGVKTDFEDKVKRVLKLIKDDTLEE-DGTPVELLEREPLAELVEDVPNQYQLLYAQYN 211 FG+HIDP K+EQL+G KT+ +DKVK +L+LIK++ L+E DG L+R+PL EL+ED YQ LY +Y+ Sbjct: 14 FGNHIDPVKDEQLKGNKTEIDDKVKTLLELIKEEGLDEKDGNGDGNLKRQPLIELIEDFHRNYQSLYDRYD 84
BLAST of GR405801 vs. TrEMBL
Match: B9RCP5_RICCO (Centromeric protein E, putative OS=Ricinus communis GN=RCOM_1691110 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.889e-12 Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = -1 Query: 2 FGSHIDPDKEEQLQGVKTDFEDKVKRVLKLIKDDTLEE-DGTPVELLEREPLAELVEDVPNQYQLLYAQYN 211 FGSH+DP+K EQL+G KT++++KV+++LKLIK+ LEE D E +EPL L+ D YQ LY QY+ Sbjct: 14 FGSHVDPEKVEQLKGTKTEWDNKVEKILKLIKEQDLEEKDEILAENSRKEPLIGLIMDFHRHYQSLYEQYD 84
BLAST of GR405801 vs. TrEMBL
Match: B9GL85_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640386 PE=4 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.579e-7 Identity = 27/53 (50.94%), Postives = 39/53 (73.58%), Query Frame = -1 Query: 2 DFEDKVKRVLKLIKDDTLEE-DGTPVELLEREPLAELVEDVPNQYQLLYAQYN 157 + +DKVKR+LKLIK++ LEE +G E ++EPL EL+ED+ +Y LY QY+ Sbjct: 12 EIDDKVKRILKLIKEEDLEEQEGLSEENSKKEPLIELIEDLQKEYHSLYGQYD 64
BLAST of GR405801 vs. TAIR peptide
Match: AT1G64330.1 (| Symbols: | myosin heavy chain-related | chr1:23872172-23873970 FORWARD LENGTH=555) HSP 1 Score: 56.225 bits (134), Expect = 4.801e-9 Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = -1 Query: 2 FGSHIDPDKEEQLQGVKTDFEDKVKRVLKLIKDDTLEEDGTPVELLEREPLAELVEDVPNQYQLLYAQYN 211 F H+ PD E L+G KT+ ++KVK++L +++ +EED + +R +AELV+D +Y+ LY QY+ Sbjct: 14 FEPHLHPDNGESLKGTKTEIDEKVKKILGIVESGDIEEDES-----KRLVVAELVKDFYKEYESLYHQYD 78
BLAST of GR405801 vs. TAIR peptide
Match: AT5G41790.1 (| Symbols: CIP1 | COP1-interactive protein 1 | chr5:16727530-16732391 FORWARD LENGTH=1586) HSP 1 Score: 51.6026 bits (122), Expect = 1.183e-7 Identity = 24/70 (34.29%), Postives = 44/70 (62.86%), Query Frame = -1 Query: 2 FGSHIDPDKEEQLQGVKTDFEDKVKRVLKLIKDDTLEEDGTPVELLEREPLAELVEDVPNQYQLLYAQYN 211 F H D +K E L+G KT+ ++KV ++L +++ + ED + R+ +A+LV++ ++YQ LY QY+ Sbjct: 14 FEPHFDHEKGEMLKGTKTEIDEKVNKILGMVESGDVNEDES-----NRQVVADLVKEFYSEYQSLYRQYD 78 The following BLAST results are available for this feature:
BLAST of GR405801 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 4
BLAST of GR405801 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR405801 ID=GR405801; Name=GR405801; organism=Cicer arietinum; type=EST; length=211bpback to top |