GR420871

EST Overview
NameGR420871
Unique NameGR420871
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length478
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of GR420871 vs. TrEMBL
Match: D7L4J5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_900440 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.875e-7
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 3 
Query:  102 MGGFEQQVKYRAKEVKSFFKKGVRIVGKEIHKGWSKVINTSISKNDLSTL 251
            MG FE QVK RA E+K  FKKG+++VGK   KGWSKV N   + +D+S L
Sbjct:    1 MGAFEDQVKMRALELKHLFKKGIKVVGKSCKKGWSKVKNLRQAGDDVSYL 50
The following BLAST results are available for this feature:
BLAST of GR420871 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
D7L4J5_ARALY1.875e-756.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 3..24
score
NoneNo IPR availableSEGsegsegcoord: 32..38
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420871 ID=GR420871; Name=GR420871; organism=Cicer arietinum; type=EST; length=478bp
CCTCTCTCGGCGTTTTAACTTTGTAGTTCTTCTCTCTCTCCTCTCTTAAA
AAAACCATCTCTCTAAAAAAACCATCTCTCTCTCTCTCTCTCTCTCTTAC
GATGGGTGGGTTTGAACAGCAGGTGAAGTACAGAGCCAAGGAGGTCAAGT
CATTTTTCAAGAAGGGAGTGAGGATTGTTGGGAAGGAAATTCATAAAGGA
TGGAGCAAAGTCATAAATACAAGCATATCAAAAAATGATCTTTCAACTCT
TATTGTTTTTATTTTTTCTCTTTTGATAGGTTTGTTTGTATTTTATCTCC
GTTTTGATGTATAATTTGATCTTCTGAATCTATATATACTTTTCTCGTTT
TGTTTTTTCCTCCCTTTTGGATTTCTTATGGGTGTTTTTTAGGGATTTTA
TTATTTTTGAGAGACAGTGTTTATGTTTTTTGCCTTTTTTGAGTTTAATT
ACTATGGGCATATAGTATTTCTTTGTAA
back to top