GR391424

EST Overview


Name	GR391424
Unique Name	GR391424
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	640

Libraries


Library Name	Type
LIBEST_024777 ICC1882 dehydration stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR391424 vs. SwissProt
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.326e-8
Identity = 36/109 (33.03%), Postives = 54/109 (49.54%), Query Frame = -3

Query:  186 VE*NGGPGKIKESYGGRGGITL*RVGRIXXXXXXXXXXXGPVTXXXXXXXXXGKISCGAHKMEAPNGGTMGKVCVKFGGAGVSEPIEKESLEGKSRGGPIVGSIGGEVV 512
            +E NGGPG +K+     GG TL  + ++             +           KIS  A   E PNGG++GK+ VK+   G ++PIEKE  EGK++G  +  +I   V+
Sbjct:   44 LEGNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDIVEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVL 152

The following BLAST results are available for this feature:

BLAST of GR391424 vs. SwissProt

BLAST of GR391424 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
ABR18_PEA	3.326e-8	33.03	ABA-responsive protein ABR18 OS=Pisum sativum PE=2...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 73..84 score
None	No IPR available	SEG	seg	seg	coord: 37..52 score
None	No IPR available	SEG	seg	seg	coord: 6..17 score: NAcoord: 21..30 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR391424 ID=GR391424; Name=GR391424; organism=Cicer arietinum; type=EST; length=640bp
ACGAATGAACGTTTTCAATTTTAAACGTCAACTCGAGATACGAATACTTG
AAAGATGGCACTTCTGGAAATAGAATTGGCCACTACCCAACCCAACAGGT
TACTTTGAATGAAAGCCAACCTATTGACACTCCTTCTCGAGTCACCTTCT
CCTGAAGGATGGATTCCCCGTTGTTAGGATATGTTCACAACCTCCCCCCC
AATGGACCCTACAATAGGGCCCCCCCTCGACTTTCCCTCTAAAGACTCCT
TTTCAATGGGCTCAGAAACTCCTGCGCCCCCAAATTTGACGCACACCTTT
CCCATGGTTCCTCCATTTGGGGCTTCCATTTTGTGCGCCCCACATGAAAT
TTTTCCCACCGCCACTGACGAGCCTGCCCCCCCAGTTACGGGGCCCTCAT
TTCCCTCATTTGTTTCAACAGTTGTTTCGATTCTTCCCACCCTTTACAAG
GTGATTCCCCCTCTACCACCGTAACTTTCTTTAATTTTGCCAGGACCCCC
ATTTCACTCGACGTTTTTCCTCAAACGTTAGGACACCCCCGACTTTTGCA
CTGGGGATCATCTATTCCTTTCACACAACCTTTCCTACCCTTGGTTGCAC
CCCCCCAATAAGGGCTTTCTTGCCCCCATTGCACCCCCCC

Search form