GR393642

EST Overview
NameGR393642
Unique NameGR393642
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length320
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
KEGG analysis for Cicer arietinum unigene v12011-01-05
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR393642 vs. TrEMBL
Match: B9HVP4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_822033 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.210e-24
Identity = 56/67 (83.58%), Postives = 58/67 (86.57%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQGTIPLIPKPANA 201
            PLNKCRQ+EF+LPWKCENERH YEKCEYELVMERMLQMQKIRE E A  KQ   QGTIPLIPK ANA
Sbjct:   36 PLNKCRQSEFFLPWKCENERHVYEKCEYELVMERMLQMQKIREAE-AKLKQSHKQGTIPLIPKTANA 101          
BLAST of GR393642 vs. TrEMBL
Match: A9PAF1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_657050 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.432e-23
Identity = 55/67 (82.09%), Postives = 57/67 (85.07%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQGTIPLIPKPANA 201
            PLNKCR AEF+LPWKCE+ERH YEKCEYELVMERMLQMQKIRE E A  KQ   QGTIPLIPK ANA
Sbjct:   36 PLNKCRHAEFFLPWKCESERHIYEKCEYELVMERMLQMQKIREAE-AKLKQSHKQGTIPLIPKTANA 101          
BLAST of GR393642 vs. TrEMBL
Match: B9S7B7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0775920 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.109e-23
Identity = 52/67 (77.61%), Postives = 54/67 (80.60%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQGTIPLIPKPANA 201
            PLNKCRQAEFYLPWKCENERH+YEKCEYELVMERMLQMQKIREQE    +      TI LIPK A A
Sbjct:   36 PLNKCRQAEFYLPWKCENERHAYEKCEYELVMERMLQMQKIREQEAMLKQPNKGNTTISLIPKTAGA 102          
BLAST of GR393642 vs. TrEMBL
Match: C7SI17_THEHA (Putative NADH dehydrogenase OS=Thellungiella halophila PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.860e-22
Identity = 48/67 (71.64%), Postives = 54/67 (80.60%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQGTIPLIPKPANA 201
            PLNKCRQAEF+LPWKCE+ERH YEKCEYELVMERML MQKIRE+E    +  +    +PLIPK ANA
Sbjct:   36 PLNKCRQAEFFLPWKCEDERHVYEKCEYELVMERMLAMQKIREEEAKAKQNKVQGNGVPLIPKTANA 102          
BLAST of GR393642 vs. TrEMBL
Match: Q9SKC9_ARATH (At2g02050 OS=Arabidopsis thaliana GN=At2g02050/F14H20.12 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.027e-21
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQG--TIPLIPKPANA 201
            PLNKCRQAEFYLPWKCE+ERH YEKCEYELVMERML M+KIRE+E A +KQ   QG   +PLIPK ANA
Sbjct:   36 PLNKCRQAEFYLPWKCEDERHVYEKCEYELVMERMLAMKKIREEE-ALAKQNKLQGNAAVPLIPKTANA 103          
BLAST of GR393642 vs. TrEMBL
Match: Q42155_ARATH (NADH dehoydrogenase OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.287e-21
Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQG--TIPLIPKPANA 201
            PLNKCRQAEFYLPWKCE+ERH YEKCEYELVME+ML M+KIRE+E A +KQ   QG   +PLIPK ANA
Sbjct:   36 PLNKCRQAEFYLPWKCEDERHVYEKCEYELVMEKMLAMKKIREEE-ALAKQNKLQGNAAVPLIPKTANA 103          
BLAST of GR393642 vs. TrEMBL
Match: D7LPZ0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484128 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.987e-21
Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQG--TIPLIPKPANA 201
            PLNKCRQAEF+LPWKCE+ERH YEKCEYELVMERML M+KIRE+E A +KQ   QG   +PLIPK ANA
Sbjct:   36 PLNKCRQAEFFLPWKCEDERHVYEKCEYELVMERMLAMKKIREEE-ALAKQNKLQGNAAVPLIPKTANA 103          
BLAST of GR393642 vs. TrEMBL
Match: C6SZG1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.901e-21
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIRE-QEKATSKQPLSQGTIPLIPKPANA 201
            PLNKCRQAEFYLPWKC+++RHSYEKC+YELVMERMLQMQKIRE Q+   +KQPL       +PKPANA
Sbjct:   36 PLNKCRQAEFYLPWKCQDQRHSYEKCQYELVMERMLQMQKIREHQQNPNAKQPLI-----ALPKPANA 98          
BLAST of GR393642 vs. TrEMBL
Match: Q8GXZ6_ARATH (Putative uncharacterized protein At2g02050/F14H20.12 OS=Arabidopsis thaliana GN=At2g02050/F14H20.12 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.654e-21
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQG--TIPLIPKPANA 201
            PLNKCRQAEFYLPWKCE+ERH Y KCEYELVMERML M+KIRE+E A +KQ   QG   +PLIPK ANA
Sbjct:   36 PLNKCRQAEFYLPWKCEDERHVYGKCEYELVMERMLAMKKIREEE-ALAKQNKLQGNAAVPLIPKAANA 103          
BLAST of GR393642 vs. TrEMBL
Match: A5BAM7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025199 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.654e-21
Identity = 52/70 (74.29%), Postives = 56/70 (80.00%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQE---KATSKQPLSQGTIPLIPKPANA 201
            PLNKCR AEFYLPWKCE ERH YEKCEYELVMERML+MQKI+E+E   K + KQP     IPLIPK ANA
Sbjct:   36 PLNKCRHAEFYLPWKCEAERHVYEKCEYELVMERMLKMQKIQEEEAKLKQSQKQP-----IPLIPKTANA 100          
BLAST of GR393642 vs. TAIR peptide
Match: AT2G02050.1 (| Symbols: | NADH-ubiquinone oxidoreductase B18 subunit, putative | chr2:490024-490335 FORWARD LENGTH=103)

HSP 1 Score: 106.301 bits (264), Expect = 3.933e-24
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 1
Query:    1 PLNKCRQAEFYLPWKCENERHSYEKCEYELVMERMLQMQKIREQEKATSKQPLSQG--TIPLIPKPANA 201
            PLNKCRQAEFYLPWKCE+ERH YEKCEYELVMERML M+KIRE+E A +KQ   QG   +PLIPK ANA
Sbjct:   36 PLNKCRQAEFYLPWKCEDERHVYEKCEYELVMERMLAMKKIREEE-ALAKQNKLQGNAAVPLIPKTANA 103          
The following BLAST results are available for this feature:
BLAST of GR393642 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HVP4_POPTR2.210e-2483.58Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PAF1_POPTR1.432e-2382.09Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S7B7_RICCO7.109e-2377.61Putative uncharacterized protein OS=Ricinus commun... [more]
C7SI17_THEHA7.860e-2271.64Putative NADH dehydrogenase OS=Thellungiella halop... [more]
Q9SKC9_ARATH1.027e-2176.81At2g02050 OS=Arabidopsis thaliana GN=At2g02050/F14... [more]
Q42155_ARATH2.287e-2175.36NADH dehoydrogenase OS=Arabidopsis thaliana PE=4 S... [more]
D7LPZ0_ARALY2.987e-2175.36Putative uncharacterized protein OS=Arabidopsis ly... [more]
C6SZG1_SOYBN3.901e-2173.53Putative uncharacterized protein OS=Glycine max PE... [more]
Q8GXZ6_ARATH6.654e-2175.36Putative uncharacterized protein At2g02050/F14H20.... [more]
A5BAM7_VITVI6.654e-2174.29Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of GR393642 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G02050.13.933e-2476.81| Symbols: | NADH-ubiquinone oxidoreductase B18 s... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008698NADH:ubiquinone oxidoreductase, B18 subunitPANTHERPTHR20900NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNITcoord: 1..72
score: 2.6
IPR008698NADH:ubiquinone oxidoreductase, B18 subunitPFAMPF05676NDUF_B7coord: 1..39
score: 2.5
NoneNo IPR availableSEGsegsegcoord: 25..39
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR393642 ID=GR393642; Name=GR393642; organism=Cicer arietinum; type=EST; length=320bp
CCTCTCAACAAGTGCAGACAAGCCGAATTCTATCTTCCATGGAAGTGCGA
GAACGAACGCCACTCTTACGAAAAGTGCGAATACGAACTCGTCATGGAGA
GAATGCTTCAGATGCAAAAGATCCGCGAACAGGAAAAAGCTACTTCCAAA
CAACCTCTCTCACAGGGAACTATTCCTCTCATTCCTAAACCTGCCAATGC
ACGATTCCTATTTCTTTTGAACCTTTGCTTGCATGGGATGTTCTTTCCTG
TTTCCTACTGTATGGTATCAAAGTTTCCTTCAAATGTTTGTCCTGAGACT
TCTATAGATTGATTATACTC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003954NADH dehydrogenase activity
GO:0008137NADH dehydrogenase (ubiquinone) activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: INTERPRO
TermDefinition
IPR008698NDUB7