GR916874

EST Overview


Name	GR916874
Unique Name	GR916874
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	447

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR916874 vs. TAIR peptide
Match: AT1G53380.3 (| Symbols: | Plant protein of unknown function (DUF641) | chr1:19913341-19914702 REVERSE LENGTH=453)

HSP 1 Score: 50.447 bits (119), Expect = 4.648e-7
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 2

Query:   26 YMESVNDEEMFQXXXXXXXXXQHVGFTVVPGFRIGKTVLQCQVYLT 163
            YM+SV +E  F            V FTVVPGFRIGKT +QC+VYL+
Sbjct:  406 YMKSVAEEAFFPAAESSPESEPRVAFTVVPGFRIGKTSIQCEVYLS 451

[Close]

BLAST of GR916874 vs. TAIR peptide
Match: AT1G53380.2 (| Symbols: | Plant protein of unknown function (DUF641) | chr1:19913341-19914702 REVERSE LENGTH=453)

HSP 1 Score: 50.447 bits (119), Expect = 4.648e-7
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 2

Query:   26 YMESVNDEEMFQXXXXXXXXXQHVGFTVVPGFRIGKTVLQCQVYLT 163
            YM+SV +E  F            V FTVVPGFRIGKT +QC+VYL+
Sbjct:  406 YMKSVAEEAFFPAAESSPESEPRVAFTVVPGFRIGKTSIQCEVYLS 451

[Close]

BLAST of GR916874 vs. TAIR peptide
Match: AT1G53380.1 (| Symbols: | Plant protein of unknown function (DUF641) | chr1:19913341-19914702 REVERSE LENGTH=453)

HSP 1 Score: 50.447 bits (119), Expect = 4.648e-7
Identity = 24/46 (52.17%), Postives = 29/46 (63.04%), Query Frame = 2

Query:   26 YMESVNDEEMFQXXXXXXXXXQHVGFTVVPGFRIGKTVLQCQVYLT 163
            YM+SV +E  F            V FTVVPGFRIGKT +QC+VYL+
Sbjct:  406 YMKSVAEEAFFPAAESSPESEPRVAFTVVPGFRIGKTSIQCEVYLS 451

The following BLAST results are available for this feature:

BLAST of GR916874 vs. TAIR peptide

BLAST of GR916874 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G53380.3	4.648e-7	52.17	\| Symbols: \| Plant protein of unknown function (D...	[more]
AT1G53380.2	4.648e-7	52.17	\| Symbols: \| Plant protein of unknown function (D...	[more]
AT1G53380.1	4.648e-7	52.17	\| Symbols: \| Plant protein of unknown function (D...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 21..29 score
None	No IPR available	SEG	seg	seg	coord: 3..15 score: NAcoord: 19..32 score
None	No IPR available	SEG	seg	seg	coord: 21..35 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR916874 ID=GR916874; Name=GR916874; organism=Cicer arietinum; type=EST; length=447bp
GATTTCGAGCGGCCGCCCGGGCAGGTACATGGAAAGTGTGAATGATGAAG
AAATGTTCCAAACAACAACAACAACAATTGAAACAGAACAACATGTTGGT
TTCACTGTTGTTCCTGGTTTTAGGATTGGTAAAACTGTTTTACAGTGTCA
AGTTTACCTTACACAAAGGTGAAAAATTAAAGGTGGGGCCCACAACATAA
GAGGAAGGACATGGTTGAATGTGATGTTGTTTTGTAGGGACTGAAAAGTT
TTGCTAGGATCAATGGGGCATTTTTGTCCTTTTGTGTTTTGGCAATTTTA
GAAAAAAGAAAAAAGAAAGCTAGTGGACTATAATAGCATTGGGAAGAACC
CTTTTTACTTTAGAATCTTTTTTATTTTTAATTTATGCAGATTTTATCTT
ATTTATCAAAGACATCCCCCCAAATTTTGTTGATATCAGGGCGGTGA

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