HO066584

EST Overview
NameHO066584
Unique NameHO066584
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length317
Libraries
Library NameType
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of HO066584 vs. SwissProt
Match: ILV5_ARATH (Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=At3g58610 PE=2 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 2.251e-7
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = -3 
Query:  208 GAIEVCAELRPXVDISVPADADFVRPE 288
            GAIEVCA+LRP VDISVPADADFVRPE
Sbjct:  559 GAIEVCAQLRPTVDISVPADADFVRPE 585
[Close]
BLAST of HO066584 vs. SwissProt
Match: ILV5_ORYSJ (Ketol-acid reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0573700 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 3.840e-7
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = -3 
Query:  208 GAIEVCAELRPXVDISVPADADFVRPE 288
            GAIEVCAELRP VDISVPA+ADFVRPE
Sbjct:  547 GAIEVCAELRPTVDISVPANADFVRPE 573
[Close]
BLAST of HO066584 vs. TAIR peptide
Match: AT3G58610.3 (| Symbols: | ketol-acid reductoisomerase | chr3:21671561-21674639 FORWARD LENGTH=591)

HSP 1 Score: 54.299 bits (129), Expect = 1.779e-8
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = -3 
Query:  208 GAIEVCAELRPXVDISVPADADFVRPE 288
            GAIEVCA+LRP VDISVPADADFVRPE
Sbjct:  559 GAIEVCAQLRPTVDISVPADADFVRPE 585
[Close]
BLAST of HO066584 vs. TAIR peptide
Match: AT3G58610.2 (| Symbols: | ketol-acid reductoisomerase | chr3:21671561-21674639 FORWARD LENGTH=591)

HSP 1 Score: 54.299 bits (129), Expect = 1.779e-8
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = -3 
Query:  208 GAIEVCAELRPXVDISVPADADFVRPE 288
            GAIEVCA+LRP VDISVPADADFVRPE
Sbjct:  559 GAIEVCAQLRPTVDISVPADADFVRPE 585
[Close]
BLAST of HO066584 vs. TAIR peptide
Match: AT3G58610.1 (| Symbols: | ketol-acid reductoisomerase | chr3:21671561-21674639 FORWARD LENGTH=591)

HSP 1 Score: 54.299 bits (129), Expect = 1.779e-8
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = -3 
Query:  208 GAIEVCAELRPXVDISVPADADFVRPE 288
            GAIEVCA+LRP VDISVPADADFVRPE
Sbjct:  559 GAIEVCAQLRPTVDISVPADADFVRPE 585
The following BLAST results are available for this feature:
BLAST of HO066584 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
ILV5_ARATH2.251e-792.59Ketol-acid reductoisomerase, chloroplastic OS=Arab... [more]
ILV5_ORYSJ3.840e-792.59Ketol-acid reductoisomerase, chloroplastic OS=Oryz... [more]
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BLAST of HO066584 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G58610.31.779e-892.59| Symbols: | ketol-acid reductoisomerase | chr3:2... [more]
AT3G58610.21.779e-892.59| Symbols: | ketol-acid reductoisomerase | chr3:2... [more]
AT3G58610.11.779e-892.59| Symbols: | ketol-acid reductoisomerase | chr3:2... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 3..16
score: NAcoord: 28..38
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO066584 ID=HO066584; Name=HO066584; organism=Cicer arietinum; type=EST; length=317bp
ATTTGGGAAACATAATTTATTAACTAATTATTACCAATGTCATACGTAAA
ATCTTGGTAGTAGTCATACAAAACTTGCATACCAACACTCAACCATTTAA
AAACTCACTAACAGGATAGCTGCTATTCTGAGGATATTCTTAAGGGGAAT
CAATCAGCTCAGGAAACGCAACAATTGGTTCAAGTTCTAGTTACTANACT
GGCGCAACTCGGGGCGGACAAAGTCTGCATCTGCTGGCACTGAAATGTCT
ACTGNGGGTCTCAGTTCAGCACAAACTTCAATGGCTCCCCCGCGTACCTG
CCCGGGCGGCGCTCGAA
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