HO067055

EST Overview


Name	HO067055
Unique Name	HO067055
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	353

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067055 vs. TrEMBL
Match: B7FGR5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.861e-32
Identity = 74/105 (70.48%), Postives = 78/105 (74.29%), Query Frame = 1

Query:   22 TSTSAETKEEXXXXXXXXXXXXXXXXXXXXXXX-QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTGITGPKGFALSSYNSGEST 333
            TS +AETKEE                        QMMEEDVIPSLK ILEAQQDLSDI+LVFQDNKLEGSFLKKGNPYSFWAFFPTG+TGPKGF+LSSYNSG ST
Sbjct:   73 TSATAETKEEVKEEAPKAAAVKKTPAKAPVKPLPQMMEEDVIPSLKAILEAQQDLSDIELVFQDNKLEGSFLKKGNPYSFWAFFPTGLTGPKGFSLSSYNSGAST 177

[Close]

BLAST of HO067055 vs. TrEMBL
Match: C6SVB3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 9.487e-28
Identity = 66/105 (62.86%), Postives = 75/105 (71.43%), Query Frame = 1

Query:   22 TSTSAETKEEXXXXXXXXXXXXXXXXXXXXXXXQMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFALSSYNSGEST 333
            T+ +AETKEE                       QMMEEDVIPSLK+I EAQ+D S+I+LVF+DNKLEGSFLKKGNPYSFWAFFPTG + GPKGF+LSS NSG ST
Sbjct:   75 TAATAETKEEVKEAPKAEPAKKPPAKAPAKPLPQMMEEDVIPSLKSIFEAQEDFSNIELVFKDNKLEGSFLKKGNPYSFWAFFPTGNLIGPKGFSLSSNNSGAST 179

[Close]

BLAST of HO067055 vs. TrEMBL
Match: D7SZ84_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2377.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006115001 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.515e-25
Identity = 63/104 (60.58%), Postives = 71/104 (68.27%), Query Frame = 1

Query:   25 STSAETKEEXXXXXXXXXXXXXXXXXXXXXXXQMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFALSSYNSGEST 333
            + +AETKE                        QMMEEDVIPSLK+ILEAQ DLS+I+L FQDN+LEGSF KKG PYSFWAFFP G+ TGPKGF+LSSY SG ST
Sbjct:   27 TVAAETKEVKPAQEKGPAKPKPPAKAPVKPLPQMMEEDVIPSLKSILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFPNGVLTGPKGFSLSSYGSGSST 130

[Close]

BLAST of HO067055 vs. TrEMBL
Match: A5ATF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015578 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.675e-24
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFALSSYNSGEST 333
            QMMEEDVIPSLK+ILEAQ DLS+I+L FQDN+LEGSF KKG PYSFWAFF  G+ TGPKGF+LSSY SG ST
Sbjct:  114 QMMEEDVIPSLKSILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFXNGVLTGPKGFSLSSYGSGSST 185

[Close]

BLAST of HO067055 vs. TrEMBL
Match: B9IAY1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_573153 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.187e-24
Identity = 52/71 (73.24%), Postives = 62/71 (87.32%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTGITGPKGFALSSYNSGEST 333
            Q+MEEDVIPSLK  LEAQ D+++++L F DN+LEGSFL+KG PYSFWAFFP G+TGPKGF+LSSY SG ST
Sbjct:   88 QLMEEDVIPSLKATLEAQDDITELELSFTDNRLEGSFLQKGTPYSFWAFFPDGLTGPKGFSLSSYGSGVST 158

[Close]

BLAST of HO067055 vs. TrEMBL
Match: B9GTF4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552682 PE=4 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.047e-22
Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFALSSYNSGEST 333
            Q+MEEDVIPSLK  LEAQ  +++++L F+D +LEGSFLKKG PYSFWAFFP G+ TGPKGF+LSSY SG ST
Sbjct:   51 QLMEEDVIPSLKATLEAQDHITELELPFEDKRLEGSFLKKGTPYSFWAFFPDGVLTGPKGFSLSSYGSGVST 122

[Close]

BLAST of HO067055 vs. TrEMBL
Match: Q93Z84_ARATH (At2g04039/At2g04039 OS=Arabidopsis thaliana GN=At2g04039 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.674e-22
Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFALSSYNSGEST 333
            QMMEEDVIP L+ ILE+Q D+SDIDL FQD+KLEG FLKK  PYSFWAFFPTG +TG KGF++SS+ SG ST
Sbjct:   93 QMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPST 164

[Close]

BLAST of HO067055 vs. TrEMBL
Match: Q3EC70_ARATH (Putative uncharacterized protein At2g04039.2 OS=Arabidopsis thaliana GN=At2g04039 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.674e-22
Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFALSSYNSGEST 333
            QMMEEDVIP L+ ILE+Q D+SDIDL FQD+KLEG FLKK  PYSFWAFFPTG +TG KGF++SS+ SG ST
Sbjct:   59 QMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPST 130

[Close]

BLAST of HO067055 vs. TrEMBL
Match: B9SF00_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1211510 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.674e-22
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTGI-TGPKGFALSSYNSGEST 333
            Q+MEEDVIPSLK I E +QD+++++L F DN+LEGSF KKGNPYSFWAFFP+G+ TG KGF+LSSY  G ST
Sbjct:   96 QLMEEDVIPSLKAIFETEQDITELELSFNDNRLEGSFRKKGNPYSFWAFFPSGVLTGTKGFSLSSYGLGAST 167

[Close]

BLAST of HO067055 vs. TrEMBL
Match: D7L7E4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_480058 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.956e-22
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFALSSYNSGEST 333
            QMMEEDVIP LK ILE+Q D+S+IDL +QD+KLEG FLKK  PYSFWAFFPTG +TG KGF++SS+ SG ST
Sbjct:   90 QMMEEDVIPPLKAILESQDDISEIDLSYQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPST 161

[Close]

BLAST of HO067055 vs. TAIR peptide
Match: AT2G04039.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 157 Blast hits to 157 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | chr2:1333714-1334438 FORWARD LENGTH=165)

HSP 1 Score: 108.227 bits (269), Expect = 1.037e-24
Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFALSSYNSGEST 333
            QMMEEDVIP L+ ILE+Q D+SDIDL FQD+KLEG FLKK  PYSFWAFFPTG +TG KGF++SS+ SG ST
Sbjct:   59 QMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPST 130

[Close]

BLAST of HO067055 vs. TAIR peptide
Match: AT2G04039.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | chr2:1333464-1334438 FORWARD LENGTH=199)

HSP 1 Score: 108.227 bits (269), Expect = 1.037e-24
Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITGPKGFALSSYNSGEST 333
            QMMEEDVIP L+ ILE+Q D+SDIDL FQD+KLEG FLKK  PYSFWAFFPTG +TG KGF++SS+ SG ST
Sbjct:   93 QMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTGAKGFSISSHGSGPST 164

[Close]

BLAST of HO067055 vs. TAIR peptide
Match: AT2G04039.3 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:1333464-1334457 FORWARD LENGTH=206)

HSP 1 Score: 90.1225 bits (222), Expect = 2.924e-19
Identity = 44/57 (77.19%), Postives = 49/57 (85.96%), Query Frame = 1

Query:  121 QMMEEDVIPSLKTILEAQQDLSDIDLVFQDNKLEGSFLKKGNPYSFWAFFPTG-ITG 288
            QMMEEDVIP L+ ILE+Q D+SDIDL FQD+KLEG FLKK  PYSFWAFFPTG +TG
Sbjct:   93 QMMEEDVIPPLQAILESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTG 149

The following BLAST results are available for this feature:

BLAST of HO067055 vs. TrEMBL
BLAST of HO067055 vs. TAIR peptide

BLAST of HO067055 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FGR5_MEDTR	4.861e-32	70.48	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SVB3_SOYBN	9.487e-28	62.86	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7SZ84_VITVI	1.515e-25	60.58	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5ATF4_VITVI	1.675e-24	79.17	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9IAY1_POPTR	2.187e-24	73.24	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GTF4_POPTR	2.047e-22	70.83	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q93Z84_ARATH	2.674e-22	73.61	At2g04039/At2g04039 OS=Arabidopsis thaliana GN=At2...	[more]
Q3EC70_ARATH	2.674e-22	73.61	Putative uncharacterized protein At2g04039.2 OS=Ar...	[more]
B9SF00_RICCO	2.674e-22	69.44	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7L7E4_ARALY	5.956e-22	72.22	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of HO067055 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G04039.2	1.037e-24	73.61	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]
AT2G04039.1	1.037e-24	73.61	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]
AT2G04039.3	2.924e-19	77.19	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021374	Protein of unknown function DUF2996	PFAM	PF11210	DUF2996	coord: 33..110 score: 2.1
None	No IPR available	SEG	seg	seg	coord: 17..39 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067055 ID=HO067055; Name=HO067055; organism=Cicer arietinum; type=EST; length=353bp
TAGCGTGGTCGCGGCCGAGGTACATCAACTAGTGCTGAAACAAAGGAGGA
GGTAAAGACAGTTCCAAAAGCAGCAACAGAAAAGAAGGCACCTGCTAAAG
CTCCAGTTAAGCCTTTACCTCAGATGATGGAAGAGGATGTGATTCCTTCA
TTGAAAACAATATTAGAAGCCCAACAAGATCTCTCTGACATCGATCTTGT
CTTTCAGGACAATAAGTTGGAAGGTTCCTTTTTGAAAAAAGGCAATCCAT
ATTCATTTTGGGCCTTCTTTCCCACAGGAATTACTGGTCCAAAGGGGTTT
GCTCTGTCATCTTATAACTCAGGAGAAAGTACCTGCCCGGGCGGCCGCTC
GAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR021374	DUF2996

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