HO067262

EST Overview


Name	HO067262
Unique Name	HO067262
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	312

Libraries


Library Name	Type
LIBEST_026414 Chickpea drought stressed cDNA SSH library BULK1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067262 vs. TrEMBL
Match: D7UCD5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00026958001 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.341e-32
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 1

Query:   34 GTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G  LLKDG +IALHA DRAAL+VSRQRV+GGGW LD+M +V+KRDPAAQFLI FR+KDTIGLRS AAGGK++
Sbjct:    7 GEVLLKDGYVIALHARDRAALHVSRQRVQGGGWFLDTMSNVTKRDPAAQFLIAFRSKDTIGLRSFAAGGKLL 78

HSP 2 Score: 49.6766 bits (117), Expect = 1.341e-32
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVFASHSFDVWE+
Sbjct:   76 KLLQINRRMEFVFASHSFDVWES 98

[Close]

BLAST of HO067262 vs. TrEMBL
Match: B9I8P4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572304 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.708e-32
Identity = 54/74 (72.97%), Postives = 65/74 (87.84%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+  ELLKDG IIAL+A DR AL+VSRQR KGGGW LD++ +V+KRDPAAQFL++FRNKDTIGLRS AAGGK++
Sbjct:  519 GKSDELLKDGHIIALYARDRPALHVSRQRAKGGGWFLDALSNVTKRDPAAQFLVVFRNKDTIGLRSFAAGGKLL 592

HSP 2 Score: 48.1358 bits (113), Expect = 1.708e-32
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVF SHSFDVWE+
Sbjct:  590 KLLQINRRMEFVFTSHSFDVWES 612

[Close]

BLAST of HO067262 vs. TrEMBL
Match: B9RDX6_RICCO (2-hydroxyacid dehydrogenase, putative OS=Ricinus communis GN=RCOM_1616510 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.893e-32
Identity = 53/74 (71.62%), Postives = 66/74 (89.19%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+  ELLKDG +IAL+A DR AL+VSRQRVKGGGW LD+M +V+KRDPA+QFL++FR+KDTIGLRS AAGGK++
Sbjct:  794 GKSGELLKDGYVIALYARDRPALHVSRQRVKGGGWFLDAMSNVTKRDPASQFLVVFRSKDTIGLRSFAAGGKLL 867

HSP 2 Score: 47.3654 bits (111), Expect = 4.893e-32
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRR EFVFASHSFDVWE+
Sbjct:  865 KLLQINRRTEFVFASHSFDVWES 887

[Close]

BLAST of HO067262 vs. TrEMBL
Match: B9GQC9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_409848 PE=4 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.086e-31
Identity = 53/74 (71.62%), Postives = 66/74 (89.19%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+  +LLKDG IIAL+A D +AL+VSRQRVKGGGW LD+M +V+KRDPAAQFL++FR+KDTIGLRS AAGGK++
Sbjct:  485 GKSDKLLKDGHIIALYARDHSALHVSRQRVKGGGWFLDAMSNVTKRDPAAQFLVVFRSKDTIGLRSFAAGGKLL 558

HSP 2 Score: 47.3654 bits (111), Expect = 1.086e-31
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRR EFVFASHSFDVWE+
Sbjct:  556 KLLQINRRTEFVFASHSFDVWES 578

[Close]

BLAST of HO067262 vs. TrEMBL
Match: Q9LMM9_ARATH (F22L4.6 protein OS=Arabidopsis thaliana GN=F22L4.6 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.159e-30
Identity = 48/74 (64.86%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+ +ELLKDG ++AL+A D + L+VSRQR K GGW LD++ +VSKRDPAAQF+I +RNKDT+GLRS AAGGK++
Sbjct:  831 GKSSELLKDGYVVALYAKDLSGLHVSRQRTKNGGWFLDTLSNVSKRDPAAQFIIAYRNKDTVGLRSFAAGGKLL 904

HSP 2 Score: 49.6766 bits (117), Expect = 1.159e-30
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVFASHSFDVWE+
Sbjct:  902 KLLQINRRMEFVFASHSFDVWES 924

[Close]

BLAST of HO067262 vs. TrEMBL
Match: D7KQ66_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_311286 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.160e-30
Identity = 48/74 (64.86%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+ +ELLKDG ++AL+A D + L+VSRQR K GGW LD++ +VSKRDPAAQF+I +RNKDT+GLRS AAGGK++
Sbjct:  832 GKSSELLKDGYVVALYAKDLSGLHVSRQRTKNGGWFLDTLSNVSKRDPAAQFIIAYRNKDTVGLRSFAAGGKLL 905

HSP 2 Score: 49.6766 bits (117), Expect = 1.160e-30
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVFASHSFDVWE+
Sbjct:  903 KLLQINRRMEFVFASHSFDVWES 925

[Close]

BLAST of HO067262 vs. TrEMBL
Match: O03984_ARATH (Putative dehydrogenase (Fragment) OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.169e-30
Identity = 48/74 (64.86%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+ +ELLKDG ++AL+A D + L+VSRQR K GGW LD++ +VSKRDPAAQF+I +RNKDT+GLRS AAGGK++
Sbjct:  506 GKSSELLKDGYVVALYAKDLSGLHVSRQRTKNGGWFLDTLSNVSKRDPAAQFIIAYRNKDTVGLRSFAAGGKLL 579

HSP 2 Score: 49.6766 bits (117), Expect = 1.169e-30
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVFASHSFDVWE+
Sbjct:  577 KLLQINRRMEFVFASHSFDVWES 599

[Close]

BLAST of HO067262 vs. TrEMBL
Match: Q948X7_ARATH (C-terminal binding protein OS=Arabidopsis thaliana GN=ANGUSTIFOLIA PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.169e-30
Identity = 48/74 (64.86%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+ +ELLKDG ++AL+A D + L+VSRQR K GGW LD++ +VSKRDPAAQF+I +RNKDT+GLRS AAGGK++
Sbjct:  501 GKSSELLKDGYVVALYAKDLSGLHVSRQRTKNGGWFLDTLSNVSKRDPAAQFIIAYRNKDTVGLRSFAAGGKLL 574

HSP 2 Score: 49.6766 bits (117), Expect = 1.169e-30
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVFASHSFDVWE+
Sbjct:  572 KLLQINRRMEFVFASHSFDVWES 594

[Close]

BLAST of HO067262 vs. TrEMBL
Match: O23702_ARATH (Dehydrogenase OS=Arabidopsis thaliana GN=At1g01510 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.169e-30
Identity = 48/74 (64.86%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+ +ELLKDG ++AL+A D + L+VSRQR K GGW LD++ +VSKRDPAAQF+I +RNKDT+GLRS AAGGK++
Sbjct:  501 GKSSELLKDGYVVALYAKDLSGLHVSRQRTKNGGWFLDTLSNVSKRDPAAQFIIAYRNKDTVGLRSFAAGGKLL 574

HSP 2 Score: 49.6766 bits (117), Expect = 1.169e-30
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVFASHSFDVWE+
Sbjct:  572 KLLQINRRMEFVFASHSFDVWES 594

[Close]

BLAST of HO067262 vs. TrEMBL
Match: Q7DLS3_ARATH (DNA, 40 kb surrounding ACS1 locus OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.170e-30
Identity = 48/74 (64.86%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+ +ELLKDG ++AL+A D + L+VSRQR K GGW LD++ +VSKRDPAAQF+I +RNKDT+GLRS AAGGK++
Sbjct:  492 GKSSELLKDGYVVALYAKDLSGLHVSRQRTKNGGWFLDTLSNVSKRDPAAQFIIAYRNKDTVGLRSFAAGGKLL 565

HSP 2 Score: 49.6766 bits (117), Expect = 1.170e-30
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVFASHSFDVWE+
Sbjct:  563 KLLQINRRMEFVFASHSFDVWES 585

[Close]

BLAST of HO067262 vs. TAIR peptide
Match: AT1G01510.1 (| Symbols: AN | NAD(P)-binding Rossmann-fold superfamily protein | chr1:187235-189836 FORWARD LENGTH=636)

HSP 1 Score: 107.457 bits (267), Expect = 4.474e-33
Identity = 48/74 (64.86%), Postives = 63/74 (85.14%), Query Frame = 1

Query:   28 GRGTELLKDGCIIALHATDRAALYVSRQRVKGGGWILDSMPDVSKRDPAAQFLIIFRNKDTIGLRSLAAGGKII 249
            G+ +ELLKDG ++AL+A D + L+VSRQR K GGW LD++ +VSKRDPAAQF+I +RNKDT+GLRS AAGGK++
Sbjct:  501 GKSSELLKDGYVVALYAKDLSGLHVSRQRTKNGGWFLDTLSNVSKRDPAAQFIIAYRNKDTVGLRSFAAGGKLL 574

HSP 2 Score: 49.6766 bits (117), Expect = 4.474e-33
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 2

Query:  242 KLLQINRRMEFVFASHSFDVWEN 310
            KLLQINRRMEFVFASHSFDVWE+
Sbjct:  572 KLLQINRRMEFVFASHSFDVWES 594

The following BLAST results are available for this feature:

BLAST of HO067262 vs. TrEMBL
BLAST of HO067262 vs. TAIR peptide

BLAST of HO067262 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7UCD5_VITVI	1.341e-32	76.39	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9I8P4_POPTR	1.708e-32	72.97	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RDX6_RICCO	4.893e-32	71.62	2-hydroxyacid dehydrogenase, putative OS=Ricinus c...	[more]
B9GQC9_POPTR	1.086e-31	71.62	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
Q9LMM9_ARATH	1.159e-30	64.86	F22L4.6 protein OS=Arabidopsis thaliana GN=F22L4.6...	[more]
D7KQ66_ARALY	1.160e-30	64.86	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
O03984_ARATH	1.169e-30	64.86	Putative dehydrogenase (Fragment) OS=Arabidopsis t...	[more]
Q948X7_ARATH	1.169e-30	64.86	C-terminal binding protein OS=Arabidopsis thaliana...	[more]
O23702_ARATH	1.169e-30	64.86	Dehydrogenase OS=Arabidopsis thaliana GN=At1g01510...	[more]
Q7DLS3_ARATH	1.170e-30	64.86	DNA, 40 kb surrounding ACS1 locus OS=Arabidopsis t...	[more]

BLAST of HO067262 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G01510.1	4.474e-33	64.86	\| Symbols: AN \| NAD(P)-binding Rossmann-fold super...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 11..19 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067262 ID=HO067262; Name=HO067262; organism=Cicer arietinum; type=EST; length=312bp
TTTTGGGAATTCGATTAGCGTGGTCGCGGCCGAGGTACTGAACTTTTGAA
AGATGGATGTATTATAGCTCTGCATGCAACAGACCGCGCGGCACTTTATG
TCTCAAGGCAAAGAGTTAAAGGTGGTGGTTGGATCCTAGATTCCATGCCA
GATGTGTCAAAAAGAGACCCTGCTGCACAGTTCCTTATCATCTTCAGAAA
CAAGGACACAATTGGCTTGCGGTCTCTTGCAGCTGGTGGAAAAATTATTA
CAGATCAATAGAAGAATGGAGTTTGTATTTGCTAGTCATAGTTTTGATGT
CTGGGAAAATTG

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