DY475380

EST Overview


Name	DY475380
Unique Name	DY475380
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	255

Libraries


Library Name	Type
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of DY475380 vs. TrEMBL
Match: D7TQD5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025587001 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.842e-11
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 3

Query:    6 EKAAPLVLGMAAFGSXGPVEPKDAIPVEQDYXLKSXDEDQGXIXXLDEDGDFGLFLFP--RVXTIEHTYSNISTEEIFLXSESGT 254
            +KAA +VLGMAAFG   PVEPKDAIPVEQD   K+   D   I        + L+  P  RV T++HT SN S+E++F+ SESG+
Sbjct:  102 DKAAHIVLGMAAFGLDLPVEPKDAIPVEQDETPKARGGD-SKIAATSSGRRWRLWPIPFRRVKTLQHTDSNSSSEDVFVDSESGS 185

[Close]

BLAST of DY475380 vs. TrEMBL
Match: A5AI91_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039548 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.842e-11
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 3

Query:    6 EKAAPLVLGMAAFGSXGPVEPKDAIPVEQDYXLKSXDEDQGXIXXLDEDGDFGLFLFP--RVXTIEHTYSNISTEEIFLXSESGT 254
            +KAA +VLGMAAFG   PVEPKDAIPVEQD   K+   D   I        + L+  P  RV T++HT SN S+E++F+ SESG+
Sbjct:  559 DKAAHIVLGMAAFGLDLPVEPKDAIPVEQDZTPKARGGD-SKIAATSSGRRWRLWPIPFRRVKTLQHTDSNSSSEDVFVDSESGS 642

[Close]

BLAST of DY475380 vs. TrEMBL
Match: B9IIW3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_667714 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.132e-10
Identity = 44/84 (52.38%), Postives = 52/84 (61.90%), Query Frame = 3

Query:    6 EKAAPLVLGMAAFGSXGPVEPKDAIPVEQDYXLKSXDEDQGXIXXLDEDGDFGLFLFP--RVXTIEHTYSNISTEEIFLXSESG 251
            EKAAP+VLGMAAFG   P EPKDAIPVE D  L+  D+D G I        + L+  P  RV     T SN S+EE+F+ SESG
Sbjct:   45 EKAAPIVLGMAAFGLDLPAEPKDAIPVELDDILEQRDDDAG-ITSAPSSRRWRLWPIPFRRV----KTSSNSSSEELFVDSESG 123

The following BLAST results are available for this feature:

BLAST of DY475380 vs. TrEMBL

BLAST of DY475380 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3


Match Name	E-value	Identity	Description
D7TQD5_VITVI	4.842e-11	50.59	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AI91_VITVI	4.842e-11	50.59	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9IIW3_POPTR	9.132e-10	52.38	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 14..25 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY475380 ID=DY475380; Name=DY475380; organism=Cicer arietinum; type=EST; length=255bp
CGGGGGAAAAGGCTGCTCCTCTTGTTCTTGGAATGGCTGCATTTGGCTCC
GANGGGCCTGTNGAGCCTAAAGATGCAATTCCAGTGGAACAGGATTACNC
ATTGAAGTCCNNGGATGAGGATCAAGGGATNATCNCTCNTCTGGACGAAG
ATGGAGACTTTGGCCTATTCCTTTTCCCAAGGGTCNAGACAATTGAGCAC
ACTTATAGCAACATATCGACTGAGGAGATATTTCTANATTCTGAGTCGGG
TACTC

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