HO063485

EST Overview
NameHO063485
Unique NameHO063485
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length378
Libraries
Library NameType
LIBEST_026410 Chickpea drought stressed cDNA SSH library AR1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
[Close]
BLAST of HO063485 vs. SwissProt
Match: SRP09_ARATH (Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana GN=SRP9 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.493e-27
Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDN++CLK+KTDQAQEAKKMEKLNNIFFTLMARGP+VDLSEVTGKEQM+ QP K+GRGRKQ
Sbjct:   39 VLKVTDNKECLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103
[Close]
BLAST of HO063485 vs. SwissProt
Match: SRP09_MAIZE (Signal recognition particle 9 kDa protein OS=Zea mays GN=SRP9 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.806e-23
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTD+R+CLK+KTDQAQ+AKKMEKLNNIFF LM RGP+VD+SEV+GKEQ + Q  K+GRGR+Q
Sbjct:   39 VLKVTDDRECLKFKTDQAQDAKKMEKLNNIFFALMTRGPDVDISEVSGKEQAEQQQAKKGRGRRQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: C6T288_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.150e-27
Identity = 59/65 (90.77%), Postives = 63/65 (96.92%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDN+QCLKYKTDQAQEAKKMEKLNN+FF LMARGP+VDLSEVTGKEQMDAQP K+GRGRKQ
Sbjct:   39 VLKVTDNQQCLKYKTDQAQEAKKMEKLNNMFFALMARGPDVDLSEVTGKEQMDAQPTKKGRGRKQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: Q0WS60_ARATH (Signal recognition particle subunit 9-like OS=Arabidopsis thaliana GN=At3g49100 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.052e-26
Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDN++CLK+KTDQAQEAKKMEKLNNIFFTLMARGP+VDLSEVTGKEQM+ QP K+GRGRKQ
Sbjct:   39 VLKVTDNKECLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: D7LS39_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906164 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.052e-26
Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDN++CLK+KTDQAQEAKKMEKLNNIFFTLMARGP+VDLSEVTGKEQM+ QP K+GRGRKQ
Sbjct:   39 VLKVTDNKECLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: D7SQL9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_141.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000751001 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.160e-25
Identity = 56/65 (86.15%), Postives = 62/65 (95.38%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDNR+CLK+KTDQAQ+AKKMEKLNNIFFTLMARGPEVD+SEVTGKE M+ QP K+GRGRKQ
Sbjct:   39 VLKVTDNRECLKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEAMEVQPAKKGRGRKQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: B9GS60_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816104 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.873e-24
Identity = 54/65 (83.08%), Postives = 61/65 (93.85%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDN++CLK+KTDQAQ+AKKMEKLNN FFTLM+RGPE DLSEVTGKEQ +AQP K+GRGRKQ
Sbjct:   39 VLKVTDNKECLKFKTDQAQDAKKMEKLNNQFFTLMSRGPEADLSEVTGKEQTEAQPGKKGRGRKQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: A9P8V6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_831614 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.561e-22
Identity = 49/65 (75.38%), Postives = 60/65 (92.31%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDN++CLK+KTDQAQ+ KKMEKLNN+FFTLM+RGP+ D+SEVTGKEQ +A+  K+GRGRKQ
Sbjct:   39 VLKVTDNKECLKFKTDQAQDVKKMEKLNNLFFTLMSRGPDADVSEVTGKEQTEARAGKKGRGRKQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: B6TGI8_MAIZE (Signal recognition particle 9 kDa protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.779e-22
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTD+R+CLK+KTDQAQ+AKKMEKLNNIFF LM RGP+VD+SEV+GKEQ + Q  K+GRGR+Q
Sbjct:   39 VLKVTDDRECLKFKTDQAQDAKKMEKLNNIFFALMTRGPDVDISEVSGKEQAEQQQAKKGRGRRQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: C5Z809_SORBI (Putative uncharacterized protein Sb10g009280 OS=Sorghum bicolor GN=Sb10g009280 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.956e-21
Identity = 48/65 (73.85%), Postives = 58/65 (89.23%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTD+R+CLK+KTDQAQ+AKKMEKLNNIFF LM RGP+ D+SEV+GKEQ + Q  K+GRGR+Q
Sbjct:   39 VLKVTDDRECLKFKTDQAQDAKKMEKLNNIFFALMTRGPDADISEVSGKEQAEQQQSKKGRGRRQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: B9S4T7_RICCO (Signal recognition particle 9 kD protein, putative OS=Ricinus communis GN=RCOM_0992270 PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.601e-21
Identity = 49/65 (75.38%), Postives = 59/65 (90.77%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VL V+DN++ LK+KTDQAQ+AKKMEKLNNIFFTLM+RGP+ D+SEVTGKEQ +AQ  +RGRGRKQ
Sbjct:   39 VLTVSDNKESLKFKTDQAQDAKKMEKLNNIFFTLMSRGPDADVSEVTGKEQPEAQTGRRGRGRKQ 103
[Close]
BLAST of HO063485 vs. TrEMBL
Match: Q652F6_ORYSJ (Putative signal recognition particle 9 kDa protein OS=Oryza sativa subsp. japonica GN=P0624H09.23-1 PE=4 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.268e-20
Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDN +CLK+KTDQAQ+AKKMEKLN IFFTLM  GP+ D+S+V+GKEQ + Q  K+GRGR+Q
Sbjct:   39 VLKVTDNHECLKFKTDQAQDAKKMEKLNTIFFTLMTHGPDADISDVSGKEQAEQQQSKKGRGRRQ 103
[Close]
BLAST of HO063485 vs. TAIR peptide
Match: AT3G49100.1 (| Symbols: | Signal recognition particle, SRP9/SRP14 subunit | chr3:18196944-18198298 FORWARD LENGTH=103)

HSP 1 Score: 121.324 bits (303), Expect = 1.405e-28
Identity = 57/65 (87.69%), Postives = 63/65 (96.92%), Query Frame = -2 
Query:  177 VLKVTDNRQCLKYKTDQAQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQMDAQPIKRGRGRKQ 371
            VLKVTDN++CLK+KTDQAQEAKKMEKLNNIFFTLMARGP+VDLSEVTGKEQM+ QP K+GRGRKQ
Sbjct:   39 VLKVTDNKECLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103
The following BLAST results are available for this feature:
BLAST of HO063485 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
SRP09_ARATH1.493e-2787.69Signal recognition particle 9 kDa protein OS=Arabi... [more]
SRP09_MAIZE3.806e-2375.38Signal recognition particle 9 kDa protein OS=Zea m... [more]
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BLAST of HO063485 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T288_SOYBN6.150e-2790.77Putative uncharacterized protein OS=Glycine max PE... [more]
Q0WS60_ARATH3.052e-2687.69Signal recognition particle subunit 9-like OS=Arab... [more]
D7LS39_ARALY3.052e-2687.69Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7SQL9_VITVI1.160e-2586.15Whole genome shotgun sequence of line PN40024, sca... [more]
B9GS60_POPTR4.873e-2483.08Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9P8V6_POPTR4.561e-2275.38Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B6TGI8_MAIZE7.779e-2275.38Signal recognition particle 9 kDa protein OS=Zea m... [more]
C5Z809_SORBI2.956e-2173.85Putative uncharacterized protein Sb10g009280 OS=So... [more]
B9S4T7_RICCO8.601e-2175.38Signal recognition particle 9 kD protein, putative... [more]
Q652F6_ORYSJ3.268e-2070.77Putative signal recognition particle 9 kDa protein... [more]
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BLAST of HO063485 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G49100.11.405e-2887.69| Symbols: | Signal recognition particle, SRP9/SR... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 35..42
score: NAcoord: 75..89
score
NoneNo IPR availablePANTHERPTHR12834:SF1SIGNAL RECOGNITION PARTICLE 9 KD PROTEINcoord: 3..50
score: 1.3
IPR008832Signal recognition particle, SRP9 subunitPANTHERPTHR12834SIGNAL RECOGNITION PARTICLE 9 KDA PROTEINcoord: 3..50
score: 1.3
IPR008832Signal recognition particle, SRP9 subunitPFAMPF05486SRP9-21coord: 3..37
score: 2.7
IPR009018Signal recognition particle, SRP9/SRP14 subunitGENE3D3.30.720.10no descriptioncoord: 3..47
score: 2.6
IPR009018Signal recognition particle, SRP9/SRP14 subunitSUPERFAMILY54762Signal recognition particle alu RNA binding heterodimer, SRP9/14coord: 3..45
score: 6.2

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO063485 ID=HO063485; Name=HO063485; organism=Cicer arietinum; type=EST; length=378bp
GGCGGCCGCGGGATTCGATTAGCGTGGTCGCGGCCCATGTACATTCAGAA
AACAGAAAACATATAAATTGATCAAGGCCTGGATGTAAGATTTTGGAATG
GGTAAATAATCTATCAAATCAAAATACTGATTTCCTAAGATTCATGATCT
ATTTTGACAGGAAGATACATCAGTTATTGCTTTCTTCCTCTTCCTCTTTT
AATCGGTTGTGCATCCATTTGTTCTTTCCCGGTGACTTCGGAGAGATCCA
CTTCTGGTCCCCGAGCCATCAACGTAAAGAATATATTATTAAGTTTTTCC
ATCTTCTTAGCTTCCTGTGCTTGGTCTGTCTTATACTTTAGACACTGTCG
ATTATCGGTGACCTTGAGTACCTGCCCG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:00083127S RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
GO:0045900negative regulation of translational elongation
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: INTERPRO
TermDefinition
IPR008832SRP9
IPR009018Signal_recog_particle_SRP9/14