GR393602

EST Overview
NameGR393602
Unique NameGR393602
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length328
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR393602 vs. SwissProt
Match: CSN7_ARATH (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.013e-7
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 3
Query:   42 QADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152
            + D+D RG++E+  E  GVMDYEED  RPKRRRHP++
Sbjct:  223 KGDVDIRGNKEMFGEPSGVMDYEEDGIRPKRRRHPVT 259          
BLAST of GR393602 vs. TrEMBL
Match: D7SLY4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018273001 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.601e-12
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 3
Query:   42 QADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152
            +ADIDFRGHEEI SE GGVMDYEEDRSRPKRRRHPIS
Sbjct:  223 KADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPIS 259          
BLAST of GR393602 vs. TrEMBL
Match: A9PEE7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.630e-11
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 3
Query:   42 QADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPI 149
            +ADIDFRGHEEI SE GGVMDYEEDRSRPKRRRHPI
Sbjct:  223 KADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258          
BLAST of GR393602 vs. TrEMBL
Match: D7M6C1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_663958 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.398e-9
Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 3
Query:   24 EVTHCKQADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPI 149
            EV H  QAD++FRG EEI  E  GVM+YEEDRSRPKRRRH +
Sbjct:   41 EVAHYGQADVEFRGQEEIFGEPSGVMEYEEDRSRPKRRRHRV 82          
BLAST of GR393602 vs. TrEMBL
Match: B4F8L1_MAIZE (COP9 signalosome complex subunit 7 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.438e-9
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 3
Query:   39 KQADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHP 146
            KQADID RGH+E  SESGG+MD+EEDR RPKRRR P
Sbjct:  224 KQADIDLRGHDEFLSESGGIMDFEEDRVRPKRRRQP 259          
BLAST of GR393602 vs. TrEMBL
Match: C4J8Z7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.425e-7
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3
Query:   21 QEVTHCKQADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152
            +E     +ADID RGH++  SES G+MD+EEDR RPKRRR P++
Sbjct:  217 EEAKKSIKADIDIRGHDDYLSESVGIMDFEEDRVRPKRRRQPLA 260          
BLAST of GR393602 vs. TrEMBL
Match: C4IY77_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.425e-7
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3
Query:   21 QEVTHCKQADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152
            +E     +ADID RGH++  SES G+MD+EEDR RPKRRR P++
Sbjct:  202 EEAKKSIKADIDIRGHDDYLSESVGIMDFEEDRVRPKRRRQPLA 245          
BLAST of GR393602 vs. TAIR peptide
Match: AT1G02090.1 (| Symbols: FUS5, CSN7, COP15, ATCSN7 | Proteasome component (PCI) domain protein | chr1:387479-389568 REVERSE LENGTH=260)

HSP 1 Score: 53.9138 bits (128), Expect = 2.387e-8
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 3
Query:   42 QADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152
            + D+D RG++E+  E  GVMDYEED  RPKRRRHP++
Sbjct:  223 KGDVDIRGNKEMFGEPSGVMDYEEDGIRPKRRRHPVT 259          
The following BLAST results are available for this feature:
BLAST of GR393602 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CSN7_ARATH3.013e-759.46COP9 signalosome complex subunit 7 OS=Arabidopsis ... [more]
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BLAST of GR393602 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
D7SLY4_VITVI5.601e-1291.89Whole genome shotgun sequence of line PN40024, sca... [more]
A9PEE7_POPTR1.630e-1191.67Putative uncharacterized protein OS=Populus tricho... [more]
D7M6C1_ARALY3.398e-969.05Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
B4F8L1_MAIZE4.438e-977.78COP9 signalosome complex subunit 7 OS=Zea mays PE=... [more]
C4J8Z7_MAIZE5.425e-756.82Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C4IY77_MAIZE5.425e-756.82Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
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BLAST of GR393602 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G02090.12.387e-859.46| Symbols: FUS5, CSN7, COP15, ATCSN7 | Proteasome ... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR393602 ID=GR393602; Name=GR393602; organism=Cicer arietinum; type=EST; length=328bp
GAAGTAAAGAAGTCCCTTTTCAAGAAGTTACACACTGTAAGCAGGCCGAC
ATCGACTTCAGAGGGCATGAGGAGATCTGCTCTGAATCTGGTGGAGTGAT
GGATTATGAAGAAGATCGAAGCCGACCGAAGAGGAGGCGGCATCCGATAT
CTTGAGGATTGTAGTAGATAAAGGAGCTCAATGAATTGGGTGTTTTAGTT
GCTTGCCCGACTTTTATTCATGGCATGCGTCAACTGAGAATATCAGCTTT
TGGAGACAAGTAAATCTCACATCCATACTGCACTTGTCTGTCACCCCACA
AAGCTGAGATAGGAACAAGGAACAAAAA
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