GR393602
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR393602 vs. SwissProt
Match: CSN7_ARATH (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana GN=CSN7 PE=1 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 3.013e-7 Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 3 Query: 42 QADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152 + D+D RG++E+ E GVMDYEED RPKRRRHP++ Sbjct: 223 KGDVDIRGNKEMFGEPSGVMDYEEDGIRPKRRRHPVT 259
BLAST of GR393602 vs. TrEMBL
Match: D7SLY4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018273001 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.601e-12 Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 3 Query: 42 QADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152 +ADIDFRGHEEI SE GGVMDYEEDRSRPKRRRHPIS Sbjct: 223 KADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPIS 259
BLAST of GR393602 vs. TrEMBL
Match: A9PEE7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.630e-11 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 3 Query: 42 QADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPI 149 +ADIDFRGHEEI SE GGVMDYEEDRSRPKRRRHPI Sbjct: 223 KADIDFRGHEEIYSEPGGVMDYEEDRSRPKRRRHPI 258
BLAST of GR393602 vs. TrEMBL
Match: D7M6C1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_663958 PE=4 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.398e-9 Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 3 Query: 24 EVTHCKQADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPI 149 EV H QAD++FRG EEI E GVM+YEEDRSRPKRRRH + Sbjct: 41 EVAHYGQADVEFRGQEEIFGEPSGVMEYEEDRSRPKRRRHRV 82
BLAST of GR393602 vs. TrEMBL
Match: B4F8L1_MAIZE (COP9 signalosome complex subunit 7 OS=Zea mays PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 4.438e-9 Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 3 Query: 39 KQADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHP 146 KQADID RGH+E SESGG+MD+EEDR RPKRRR P Sbjct: 224 KQADIDLRGHDEFLSESGGIMDFEEDRVRPKRRRQP 259
BLAST of GR393602 vs. TrEMBL
Match: C4J8Z7_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.425e-7 Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 21 QEVTHCKQADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152 +E +ADID RGH++ SES G+MD+EEDR RPKRRR P++ Sbjct: 217 EEAKKSIKADIDIRGHDDYLSESVGIMDFEEDRVRPKRRRQPLA 260
BLAST of GR393602 vs. TrEMBL
Match: C4IY77_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.425e-7 Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 3 Query: 21 QEVTHCKQADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152 +E +ADID RGH++ SES G+MD+EEDR RPKRRR P++ Sbjct: 202 EEAKKSIKADIDIRGHDDYLSESVGIMDFEEDRVRPKRRRQPLA 245
BLAST of GR393602 vs. TAIR peptide
Match: AT1G02090.1 (| Symbols: FUS5, CSN7, COP15, ATCSN7 | Proteasome component (PCI) domain protein | chr1:387479-389568 REVERSE LENGTH=260) HSP 1 Score: 53.9138 bits (128), Expect = 2.387e-8 Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 3 Query: 42 QADIDFRGHEEICSESGGVMDYEEDRSRPKRRRHPIS 152 + D+D RG++E+ E GVMDYEED RPKRRRHP++ Sbjct: 223 KGDVDIRGNKEMFGEPSGVMDYEEDGIRPKRRRHPVT 259 The following BLAST results are available for this feature:
BLAST of GR393602 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR393602 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 6
BLAST of GR393602 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR393602 ID=GR393602; Name=GR393602; organism=Cicer arietinum; type=EST; length=328bpback to top |