HO063561

EST Overview


Name	HO063561
Unique Name	HO063561
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	363

Libraries


Library Name	Type
LIBEST_026410 Chickpea drought stressed cDNA SSH library AR1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO063561 vs. SwissProt
Match: R18A2_ARATH (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 1.471e-30
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT T+PA LCKRESTKQFHNSKIKFPLV++K+RPP+RKLKTTYKA KPNLFM
Sbjct:  109 YTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]

BLAST of HO063561 vs. SwissProt
Match: R18A3_ARATH (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.588e-30
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT T+PA LCKRE TKQFHNSKIKFPLV++K+RPP+RKLKTTYKA+KPNLFM
Sbjct:  109 YTEMASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

[Close]

BLAST of HO063561 vs. SwissProt
Match: RL18A_CASSA (60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.348e-28
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT TIPA LCKRES+KQFHNSKIKFPLV +KIRPP+RKLKT YKA++PNLFM
Sbjct:  109 YIEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVTRKIRPPSRKLKTHYKASRPNLFM 178

[Close]

BLAST of HO063561 vs. SwissProt
Match: RL18A_ORYSJ (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.783e-27
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT T+   LCKR++TKQFH S IKFPLVY+K+RPPTRKLKTT+KA++PNLFM
Sbjct:  109 YTEMASRHRVRFPCIQIIKTATVHFKLCKRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTFKASRPNLFM 178

[Close]

BLAST of HO063561 vs. SwissProt
Match: RL18A_DANRE (60S ribosomal protein L18a OS=Danio rerio GN=rpl18a PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.096e-9
Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLF 227
            Y +M +R R R   IQI+K   I AN C+R + KQFH+SKIKFPL ++ +R   R+ K  +   +PN F
Sbjct:  110 YRDMGARHRARAHAIQIMKVQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175

[Close]

BLAST of HO063561 vs. SwissProt
Match: RL18A_DICDI (60S ribosomal protein L18a OS=Dictyostelium discoideum GN=rpl18a PE=3 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 3.188e-9
Identity = 33/69 (47.83%), Postives = 43/69 (62.32%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLF 227
            Y+EMASR   R   I II    I A+L +R +TKQFH+SKIKFPL ++       K K+T+ A +PN F
Sbjct:  106 YDEMASRHSARESSIHIIDIKEIAASLTRRANTKQFHDSKIKFPLTHR-----IAKSKSTFVANRPNTF 169

[Close]

BLAST of HO063561 vs. SwissProt
Match: RL18A_ICTPU (60S ribosomal protein L18a OS=Ictalurus punctatus GN=rpl18a PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.438e-9
Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLF 227
            Y +M +R R R   IQI+K   I AN C+R + KQFH+SKIKFPL ++ +R   R+ K  +   +P  F
Sbjct:  110 YRDMGARHRARAHAIQIMKVQVIAANKCRRAAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTRRPQTF 175

[Close]

BLAST of HO063561 vs. SwissProt
Match: RL18A_HUMAN (60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 5.438e-9
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLF 227
            Y +M +R R R   IQI+K   I A+ C+R + KQFH+SKIKFPL ++ +R   R+ K  +   +PN F
Sbjct:  110 YRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175

[Close]

BLAST of HO063561 vs. SwissProt
Match: RL18A_BOVIN (60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.438e-9
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLF 227
            Y +M +R R R   IQI+K   I A+ C+R + KQFH+SKIKFPL ++ +R   R+ K  +   +PN F
Sbjct:  110 YRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175

[Close]

BLAST of HO063561 vs. SwissProt
Match: RL18A_RAT (60S ribosomal protein L18a OS=Rattus norvegicus GN=Rpl18a PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 7.102e-9
Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLF 227
            Y +M +R R R   IQI+K   I A  C+R + KQFH+SKIKFPL ++ +R   R+ K  +   +PN F
Sbjct:  110 YRDMGARHRARAHSIQIMKVEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175

[Close]

BLAST of HO063561 vs. TrEMBL
Match: B7FJC3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.887e-31
Identity = 66/70 (94.29%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            YNEMASR RVRFPCIQIIKT TIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTR LKTTYKA KPNLFM
Sbjct:  109 YNEMASRHRVRFPCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRSLKTTYKAKKPNLFM 178

[Close]

BLAST of HO063561 vs. TrEMBL
Match: C6SZ28_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.598e-30
Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            YNEMASR RVR PCIQIIKT TIPA LCKRESTKQFHNSKIKFPLV+KK+RPPTRKLKTTYKATKPNLFM
Sbjct:  109 YNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKATKPNLFM 178

[Close]

BLAST of HO063561 vs. TrEMBL
Match: C6SYA5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.725e-30
Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            YNEMASR RVR PCIQIIKT TIPA LCKRESTKQFHNSKIKFPLVYKK+RPPTRKLKTTYKA KPNLFM
Sbjct:  109 YNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKAKKPNLFM 178

[Close]

BLAST of HO063561 vs. TrEMBL
Match: D7KEP1_ARALY (60S ribosomal protein L18A-1 OS=Arabidopsis lyrata subsp. lyrata GN=RPL18AA PE=4 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 4.648e-30
Identity = 61/70 (87.14%), Postives = 67/70 (95.71%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT T+PANLCKRESTKQFHNSKIKFPLV++K+RPPTRKLKTT+KA+KPNLFM
Sbjct:  245 YTEMASRHRVRFPCIQIIKTATVPANLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKASKPNLFM 314

[Close]

BLAST of HO063561 vs. TrEMBL
Match: B9S129_RICCO (60S ribosomal protein L18a, putative OS=Ricinus communis GN=RCOM_0632990 PE=4 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.071e-30
Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT TIPA LCKRESTKQFHNSKIKFPLV+KK+RPPTRKLKTTYKA++PNLFM
Sbjct:  234 YTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 303

[Close]

BLAST of HO063561 vs. TrEMBL
Match: A9P8B1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_813651 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.036e-29
Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            YNEMASR RVR PCIQIIKT TIPA LCKRESTKQFHNSKIKFPLV+KK+RPPTRKLKTTYKA++PNLFM
Sbjct:  109 YNEMASRHRVRSPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178

[Close]

BLAST of HO063561 vs. TrEMBL
Match: B9PCW0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_949836 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.766e-29
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT TIPA LCKRESTKQFHNSKIKFPLV+KK+RPP+RKLKTTYKA++PNLFM
Sbjct:   44 YTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 113

[Close]

BLAST of HO063561 vs. TrEMBL
Match: B9P8A0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_595970 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.766e-29
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT TIPA LCKRESTKQFHNSKIKFPLV+KK+RPP+RKLKTTYKA++PNLFM
Sbjct:   52 YTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 121

[Close]

BLAST of HO063561 vs. TrEMBL
Match: A9PBF7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728108 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.766e-29
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT TIPA LCKRESTKQFHNSKIKFPLV+KK+RPP+RKLKTTYKA++PNLFM
Sbjct:  109 YTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178

[Close]

BLAST of HO063561 vs. TrEMBL
Match: A9PA10_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.766e-29
Identity = 61/70 (87.14%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT TIPA LCKRESTKQFHNSKIKFPLV+KK+RPP+RKLKTTYKA++PNLFM
Sbjct:  109 YTEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPSRKLKTTYKASRPNLFM 178

[Close]

BLAST of HO063561 vs. TAIR peptide
Match: AT1G29970.2 (| Symbols: RPL18AA | 60S ribosomal protein L18A-1 | chr1:10498458-10501311 REVERSE LENGTH=312)

HSP 1 Score: 131.724 bits (330), Expect = 9.299e-32
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT T+PA+LCKRESTKQFHNSKIKFPLV++K+RPPTRKLKTT+KA KPNLFM
Sbjct:  243 YTEMASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312

[Close]

BLAST of HO063561 vs. TAIR peptide
Match: AT1G29965.1 (| Symbols: | Ribosomal protein L18ae/LX family protein | chr1:10498458-10499373 REVERSE LENGTH=178)

HSP 1 Score: 131.724 bits (330), Expect = 9.299e-32
Identity = 60/70 (85.71%), Postives = 66/70 (94.29%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT T+PA+LCKRESTKQFHNSKIKFPLV++K+RPPTRKLKTT+KA KPNLFM
Sbjct:  109 YTEMASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178

[Close]

BLAST of HO063561 vs. TAIR peptide
Match: AT2G34480.1 (| Symbols: | Ribosomal protein L18ae/LX family protein | chr2:14532916-14534161 REVERSE LENGTH=178)

HSP 1 Score: 131.339 bits (329), Expect = 1.214e-31
Identity = 60/70 (85.71%), Postives = 65/70 (92.86%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT T+PA LCKRESTKQFHNSKIKFPLV++K+RPP+RKLKTTYKA KPNLFM
Sbjct:  109 YTEMASRHRVRFPCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178

[Close]

BLAST of HO063561 vs. TAIR peptide
Match: AT3G14600.1 (| Symbols: | Ribosomal protein L18ae/LX family protein | chr3:4910773-4911933 FORWARD LENGTH=178)

HSP 1 Score: 129.413 bits (324), Expect = 4.615e-31
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 3

Query:   21 YNEMASRRRVRFPCIQIIKTVTIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKATKPNLFM 230
            Y EMASR RVRFPCIQIIKT T+PA LCKRE TKQFHNSKIKFPLV++K+RPP+RKLKTTYKA+KPNLFM
Sbjct:  109 YTEMASRHRVRFPCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178

The following BLAST results are available for this feature:

BLAST of HO063561 vs. SwissProt
BLAST of HO063561 vs. TrEMBL
BLAST of HO063561 vs. TAIR peptide

BLAST of HO063561 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
R18A2_ARATH	1.471e-30	85.71	60S ribosomal protein L18a-2 OS=Arabidopsis thalia...	[more]
R18A3_ARATH	5.588e-30	84.29	60S ribosomal protein L18a-3 OS=Arabidopsis thalia...	[more]
RL18A_CASSA	2.348e-28	84.29	60S ribosomal protein L18a OS=Castanea sativa GN=R...	[more]
RL18A_ORYSJ	5.783e-27	77.14	60S ribosomal protein L18a OS=Oryza sativa subsp. ...	[more]
RL18A_DANRE	1.096e-9	44.93	60S ribosomal protein L18a OS=Danio rerio GN=rpl18...	[more]
RL18A_DICDI	3.188e-9	47.83	60S ribosomal protein L18a OS=Dictyostelium discoi...	[more]
RL18A_ICTPU	5.438e-9	43.48	60S ribosomal protein L18a OS=Ictalurus punctatus ...	[more]
RL18A_HUMAN	5.438e-9	43.48	60S ribosomal protein L18a OS=Homo sapiens GN=RPL1...	[more]
RL18A_BOVIN	5.438e-9	43.48	60S ribosomal protein L18a OS=Bos taurus GN=RPL18A...	[more]
RL18A_RAT	7.102e-9	43.48	60S ribosomal protein L18a OS=Rattus norvegicus GN...	[more]

BLAST of HO063561 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FJC3_MEDTR	1.887e-31	94.29	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SZ28_SOYBN	1.598e-30	91.43	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SYA5_SOYBN	2.725e-30	91.43	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7KEP1_ARALY	4.648e-30	87.14	60S ribosomal protein L18A-1 OS=Arabidopsis lyrata...	[more]
B9S129_RICCO	6.071e-30	88.57	60S ribosomal protein L18a, putative OS=Ricinus co...	[more]
A9P8B1_POPTR	1.036e-29	88.57	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9PCW0_POPTR	1.766e-29	87.14	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9P8A0_POPTR	1.766e-29	87.14	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PBF7_POPTR	1.766e-29	87.14	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PA10_POPTR	1.766e-29	87.14	Putative uncharacterized protein OS=Populus tricho...	[more]

BLAST of HO063561 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G29970.2	9.299e-32	85.71	\| Symbols: RPL18AA \| 60S ribosomal protein L18A-1 ...	[more]
AT1G29965.1	9.299e-32	85.71	\| Symbols: \| Ribosomal protein L18ae/LX family pr...	[more]
AT2G34480.1	1.214e-31	85.71	\| Symbols: \| Ribosomal protein L18ae/LX family pr...	[more]
AT3G14600.1	4.615e-31	84.29	\| Symbols: \| Ribosomal protein L18ae/LX family pr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 5..15 score
None	No IPR available	PANTHER	PTHR10052	60S RIBOSOMAL PROTEIN L18A	coord: 7..76 score: 3.6
IPR002670	Ribosomal protein L18ae	PANTHER	PTHR10052:SF1	60S RIBOSOMAL PROTEIN L18A	coord: 7..76 score: 3.6

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO063561 ID=HO063561; Name=HO063561; organism=Cicer arietinum; type=EST; length=363bp
TAGCGTGGTCGCGGCCGAGGTACAATGAAATGGCATCTCGTCGTAGGGTG
AGGTTTCCATGCATCCAAATCATTAAAACTGTCACAATCCCTGCTAATCT
GTGTAAAAGGGAGAGCACTAAGCAATTCCACAATTCCAAAATCAAGTTCC
CATTGGTGTACAAGAAGATTAGGCCACCAACTAGGAAGCTCAAAACAACA
TACAAAGCAACCAAACCCAACTTGTTTATGTGATTCAATTAATCATATTT
CTCTTTTCATATTGGAGCTGCTTGTTTCATTGTGTTTTACCAAACTTCAT
TGCCAGCAAACTTGGACATAGTTTGCAATTTTCCTAGTTTGTTATTGATT
GATTATTTTGTCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR002670	Ribosomal protein L18ae

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