HO062448

EST Overview
NameHO062448
Unique NameHO062448
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length326
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
[Close]
BLAST of HO062448 vs. TAIR peptide
Match: AT5G10360.2 (| Symbols: EMB3010 | Ribosomal protein S6e | chr5:3258734-3260142 REVERSE LENGTH=197)

HSP 1 Score: 51.9878 bits (123), Expect = 9.069e-8
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = -1 
Query:  240 YQKLLASRLKEQRERRGESLAKKRSRLS 323
            YQKLLASRLKEQR+RR ESLAKKRSRLS
Sbjct:  161 YQKLLASRLKEQRDRRSESLAKKRSRLS 188
[Close]
BLAST of HO062448 vs. TAIR peptide
Match: AT5G10360.1 (| Symbols: EMB3010, RPS6B | Ribosomal protein S6e | chr5:3258734-3260142 REVERSE LENGTH=249)

HSP 1 Score: 51.9878 bits (123), Expect = 9.069e-8
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = -1 
Query:  240 YQKLLASRLKEQRERRGESLAKKRSRLS 323
            YQKLLASRLKEQR+RR ESLAKKRSRLS
Sbjct:  213 YQKLLASRLKEQRDRRSESLAKKRSRLS 240
[Close]
BLAST of HO062448 vs. TAIR peptide
Match: AT4G31700.2 (| Symbols: RPS6, RPS6A | ribosomal protein S6 | chr4:15346306-15347075 REVERSE LENGTH=188)

HSP 1 Score: 51.9878 bits (123), Expect = 9.069e-8
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = -1 
Query:  240 YQKLLASRLKEQRERRGESLAKKRSRLS 323
            YQKLLASRLKEQR+RR ESLAKKRSRLS
Sbjct:  151 YQKLLASRLKEQRDRRSESLAKKRSRLS 178
[Close]
BLAST of HO062448 vs. TAIR peptide
Match: AT4G31700.1 (| Symbols: RPS6, RPS6A | ribosomal protein S6 | chr4:15346306-15347714 REVERSE LENGTH=250)

HSP 1 Score: 51.9878 bits (123), Expect = 9.069e-8
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = -1 
Query:  240 YQKLLASRLKEQRERRGESLAKKRSRLS 323
            YQKLLASRLKEQR+RR ESLAKKRSRLS
Sbjct:  213 YQKLLASRLKEQRDRRSESLAKKRSRLS 240
The following BLAST results are available for this feature:
BLAST of HO062448 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G10360.29.069e-892.86| Symbols: EMB3010 | Ribosomal protein S6e | chr5:... [more]
AT5G10360.19.069e-892.86| Symbols: EMB3010, RPS6B | Ribosomal protein S6e ... [more]
AT4G31700.29.069e-892.86| Symbols: RPS6, RPS6A | ribosomal protein S6 | ch... [more]
AT4G31700.19.069e-892.86| Symbols: RPS6, RPS6A | ribosomal protein S6 | ch... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062448 ID=HO062448; Name=HO062448; organism=Cicer arietinum; type=EST; length=326bp
GAGCATGGAAAGAAATGCAACAGTTTACAGATATATATCACGAGGCCACT
TAATCCATCAAGGTAAAATTTAGATTATATTAATCCATTGAACACAAAAA
AGTATTAAAACAACATTGTTGGAACTGCAAAATAGCATAAAAAAGGCATC
AACGTCAAATAATACTATCCGAAACTCAGGCGAAGTATGAACTTCATCTG
TGCCAAAGCAGCCTATGCTGTGACAGCTGGCTTAGCACCGGAAAGCCTTG
ATCTCTTCTTAGCCAAACTCTCACCACGGCGTTCCCTTTGCTCCTTCAAC
CTGGAGGCGAGAAGTTTTTGGTACCT
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