FE670576

EST Overview


Name	FE670576
Unique Name	FE670576
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	226

Libraries


Library Name	Type
LIBEST_022821 Chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE670576 vs. TrEMBL
Match: A6H5B6_VIGUN (Putative single-stranded nucleic acid binding R3H (Fragment) OS=Vigna unguiculata GN=MtrDRAFT_AC183371g11v1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.390e-26
Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 3

Query:   15 MDSTSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            MDS SC+SND+VSGF+DKESMVDPFLVEALQNP HRLTILRMELDIQ+F+NN DQQHFEF +FPSSYL L
Sbjct:    1 MDS-SCLSNDSVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQRFMNNADQQHFEFPHFPSSYLRL 69

[Close]

BLAST of FE670576 vs. TrEMBL
Match: A6H5C6_VIGUN (Putative single-stranded nucleic acid binding R3H (Fragment) OS=Vigna unguiculata GN=MtrDRAFT_AC183371g11v1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.507e-25
Identity = 57/70 (81.43%), Postives = 64/70 (91.43%), Query Frame = 3

Query:   15 MDSTSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            MDS SC+SND+VSGF+DKESMVDPFLVEALQNP HRLTILRMELDIQ+F+ + DQQHFEF +FPSSYL L
Sbjct:    1 MDS-SCLSNDSVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQRFMTSADQQHFEFPHFPSSYLRL 69

[Close]

BLAST of FE670576 vs. TrEMBL
Match: C6T992_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.509e-24
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 3

Query:   15 MDSTSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            MDS SCV N  VSGF+DKESMVDPFLVEAL+NP HR+TILRMELDIQ+FL+N D QHFEFQ+FPSSYL L
Sbjct:    1 MDS-SCVPNGDVSGFKDKESMVDPFLVEALENPRHRVTILRMELDIQRFLSNADYQHFEFQHFPSSYLRL 69

[Close]

BLAST of FE670576 vs. TrEMBL
Match: A2Q6F7_MEDTR (Single-stranded nucleic acid binding R3H OS=Medicago truncatula GN=MtrDRAFT_AC183371g11v1 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.219e-23
Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 3

Query:   15 MDSTSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            MDS+   +ND  SGF  KESMVDPFLVEALQNP HRLTILRMELDIQKF+NN DQQHFEFQ+FPSSYL L
Sbjct:    1 MDSSLVSNNDVASGFV-KESMVDPFLVEALQNPRHRLTILRMELDIQKFMNNADQQHFEFQHFPSSYLRL 69

[Close]

BLAST of FE670576 vs. TrEMBL
Match: B9H8R7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_652547 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.270e-19
Identity = 51/70 (72.86%), Postives = 57/70 (81.43%), Query Frame = 3

Query:   15 MDSTSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            MDST+     AV+   +KESMVDPFLVEALQNP HRLTILRMELDIQ+FL N DQQ FEFQ+FP+SYL L
Sbjct:    1 MDSTT---QQAVAAINEKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQLFEFQHFPTSYLRL 67

[Close]

BLAST of FE670576 vs. TrEMBL
Match: A5AMT9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007445 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.696e-19
Identity = 51/70 (72.86%), Postives = 56/70 (80.00%), Query Frame = 3

Query:   15 MDSTSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            MDS    +ND  +   DKESMVDPFLVEALQNP HRLTILRMELDIQ+FL N DQQ FEFQ+FP+SYL L
Sbjct:    1 MDSAP-YANDVSATPGDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQQFEFQHFPTSYLRL 69

[Close]

BLAST of FE670576 vs. TrEMBL
Match: C6TJM9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.129e-18
Identity = 45/50 (90.00%), Postives = 47/50 (94.00%), Query Frame = 3

Query:   75 MVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            MVDPFLVEALQNP HRLTILRMELDIQKFL+N DQQHFEFQ+FPSSYL L
Sbjct:    1 MVDPFLVEALQNPRHRLTILRMELDIQKFLDNADQQHFEFQHFPSSYLRL 50

[Close]

BLAST of FE670576 vs. TrEMBL
Match: B9IHM5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576127 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.970e-18
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 3

Query:   15 MDSTSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            M+ST+     AV+   +KESM+DPFLVEALQNP HRLTILRMELDIQ+FL N DQQ FEF +FP+SYL L
Sbjct:    1 MESTT---PQAVAAINEKESMMDPFLVEALQNPRHRLTILRMELDIQRFLQNPDQQVFEFPHFPTSYLRL 67

[Close]

BLAST of FE670576 vs. TrEMBL
Match: B9S6G5_RICCO (R3h domain containing protein, putative OS=Ricinus communis GN=RCOM_0536310 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.103e-18
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 3

Query:   42 DAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            ++     DKESMVDPFLVEALQNP HRLTILRMELDIQ+FL N  QQ FEFQ+FP+SYL L
Sbjct:    2 ESTQAITDKESMVDPFLVEALQNPRHRLTILRMELDIQRFLQNPVQQQFEFQHFPTSYLRL 62

[Close]

BLAST of FE670576 vs. TrEMBL
Match: Q8LD07_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.825e-16
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 3

Query:   24 TSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            T+  S    +   DK   VDPFLVEALQNP HRLTILRMELD+Q+FL + DQQ FEFQ+FP+SYL L
Sbjct:    3 TALTSESGCAVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRL 69

[Close]

BLAST of FE670576 vs. TAIR peptide
Match: AT2G40960.1 (| Symbols: | Single-stranded nucleic acid binding R3H protein | chr2:17095637-17097368 FORWARD LENGTH=351)

HSP 1 Score: 87.0409 bits (214), Expect = 2.512e-18
Identity = 42/65 (64.62%), Postives = 49/65 (75.38%), Query Frame = 3

Query:   24 TSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYL 218
            T+  S    +   DK   VDPFLVEALQNP HRLTILRMELD+Q+FL + DQQ FEFQ+FP+SYL
Sbjct:    3 TALTSESGCAVIADKGFNVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYL 67

[Close]

BLAST of FE670576 vs. TAIR peptide
Match: AT5G05100.1 (| Symbols: | Single-stranded nucleic acid binding R3H protein | chr5:1505461-1506940 REVERSE LENGTH=324)

HSP 1 Score: 86.6557 bits (213), Expect = 3.281e-18
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 3

Query:   48 VSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            ++   DKE+MVDPFLVEALQNP HRLTILRMELDIQKF  + +QQ +EFQ  P+SYL L
Sbjct:    1 MAAMSDKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRL 59

[Close]

BLAST of FE670576 vs. TAIR peptide
Match: AT3G10770.2 (| Symbols: | Single-stranded nucleic acid binding R3H protein | chr3:3372461-3374026 REVERSE LENGTH=325)

HSP 1 Score: 85.5001 bits (210), Expect = 7.309e-18
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 3

Query:   48 VSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            ++   +KE+MVDPFLVEALQNP HRLTILRMELDIQKF  N +Q  FEF  FP+SYL L
Sbjct:    1 MASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRL 59

[Close]

BLAST of FE670576 vs. TAIR peptide
Match: AT3G10770.1 (| Symbols: | Single-stranded nucleic acid binding R3H protein | chr3:3372461-3374026 REVERSE LENGTH=333)

HSP 1 Score: 85.5001 bits (210), Expect = 7.309e-18
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 3

Query:   48 VSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            ++   +KE+MVDPFLVEALQNP HRLTILRMELDIQKF  N +Q  FEF  FP+SYL L
Sbjct:    1 MASMTEKEAMVDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRL 59

[Close]

BLAST of FE670576 vs. TAIR peptide
Match: AT3G56680.1 (| Symbols: | Single-stranded nucleic acid binding R3H protein | chr3:20991537-20993446 FORWARD LENGTH=353)

HSP 1 Score: 78.5666 bits (192), Expect = 8.935e-16
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 3

Query:   15 MDSTSCVSNDAVSGFRDKESMVDPFLVEALQNPHHRLTILRMELDIQKFLNNGDQQHFEFQNFPSSYLGL 224
            +  T+ V+  +V G  D    VDPFLVEAL N  HRLTILRMELD+Q+ L N +QQ FEFQ+FP+SYL L
Sbjct:    5 LPETAVVTGGSVIG--DYGFNVDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQHFPTSYLRL 72

The following BLAST results are available for this feature:

BLAST of FE670576 vs. TrEMBL
BLAST of FE670576 vs. TAIR peptide

BLAST of FE670576 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A6H5B6_VIGUN	2.390e-26	84.29	Putative single-stranded nucleic acid binding R3H ...	[more]
A6H5C6_VIGUN	4.507e-25	81.43	Putative single-stranded nucleic acid binding R3H ...	[more]
C6T992_SOYBN	6.509e-24	80.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
A2Q6F7_MEDTR	4.219e-23	80.00	Single-stranded nucleic acid binding R3H OS=Medica...	[more]
B9H8R7_POPTR	1.270e-19	72.86	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5AMT9_VITVI	3.696e-19	72.86	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C6TJM9_SOYBN	3.129e-18	90.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9IHM5_POPTR	6.970e-18	68.57	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S6G5_RICCO	9.103e-18	73.77	R3h domain containing protein, putative OS=Ricinus...	[more]
Q8LD07_ARATH	3.825e-16	64.18	Putative uncharacterized protein OS=Arabidopsis th...	[more]

BLAST of FE670576 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G40960.1	2.512e-18	64.62	\| Symbols: \| Single-stranded nucleic acid binding...	[more]
AT5G05100.1	3.281e-18	69.49	\| Symbols: \| Single-stranded nucleic acid binding...	[more]
AT3G10770.2	7.309e-18	69.49	\| Symbols: \| Single-stranded nucleic acid binding...	[more]
AT3G10770.1	7.309e-18	69.49	\| Symbols: \| Single-stranded nucleic acid binding...	[more]
AT3G56680.1	8.935e-16	58.57	\| Symbols: \| Single-stranded nucleic acid binding...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15672	CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN	coord: 20..74 score: 2.6
None	No IPR available	PANTHER	PTHR15672:SF1	R3H DOMAIN CONTAINING PROTEIN	coord: 20..74 score: 2.6
None	No IPR available	SUPERFAMILY	82708	R3H domain	coord: 12..71 score: 4.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE670576 ID=FE670576; Name=FE670576; organism=Cicer arietinum; type=EST; length=226bp
GAAACAAAAGAACCATGGATTCAACATCGTGTGTCTCTAACGATGCAGTT
TCTGGGTTCCGAGACAAGGAGTCAATGGTTGACCCTTTTTTGGTTGAAGC
TCTTCAGAACCCTCATCATCGTCTTACAATTCTGCGGATGGAGCTGGATA
TCCAGAAATTTCTGAATAATGGCGATCAGCAACATTTCGAGTTTCAGAAT
TTTCCTTCTTCTTATCTCGGACTGGC

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