HO067202

EST Overview


Name	HO067202
Unique Name	HO067202
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	230

Libraries


Library Name	Type
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.592e-24
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  117 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 182

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.592e-24
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  118 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 183

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.592e-24
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:   77 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 142

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.079e-24
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSL+  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  112 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 177

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.079e-24
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QV+LMGAVEGYR AGG
Sbjct:   55 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 120

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.079e-24
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QV+LMGAVEGYR AGG
Sbjct:  104 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 169

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.716e-24
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSL+  QSIL IWA QV+LMGAVEGYR AGG
Sbjct:  111 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG 176

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.547e-24
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+L+R  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  116 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGG 181

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.547e-24
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+L+R  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  113 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGG 178

[Close]

BLAST of HO067202 vs. SwissProt
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.547e-24
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+L+R  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  114 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179

[Close]

BLAST of HO067202 vs. TrEMBL
Match: Q6T705_TRIPR (Chlorophyll a/b binding protein OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.207e-23
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  115 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180

[Close]

BLAST of HO067202 vs. TrEMBL
Match: Q39831_SOYBN (Chlorophyll a/b-binding protein OS=Glycine max GN=cab3 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.207e-23
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  112 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 177

[Close]

BLAST of HO067202 vs. TrEMBL
Match: O81391_MEDSA (Chlorophyll a/b binding protein OS=Medicago sativa GN=CARCAB1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.207e-23
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  115 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180

[Close]

BLAST of HO067202 vs. TrEMBL
Match: O80388_CRYJA (Light-harvesting chlorophyll a/b-binding protein of photosystem II OS=Cryptomeria japonica GN=CAB PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.207e-23
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  115 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 180

[Close]

BLAST of HO067202 vs. TrEMBL
Match: C6TLM4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.207e-23
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  112 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 177

[Close]

BLAST of HO067202 vs. TrEMBL
Match: A3F6K2_PEA (Chloroplast chlorophyll a/b binding protein OS=Pisum sativum GN=cab8 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.207e-23
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  115 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 180

[Close]

BLAST of HO067202 vs. TrEMBL
Match: Q9ZP08_CICAR (Chlorophyll a/b binding protein OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.188e-23
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QV+LMGAVEGYR AGG
Sbjct:  115 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRIAGG 180

[Close]

BLAST of HO067202 vs. TrEMBL
Match: Q43437_SOYBN (Photosystem II type I chlorophyll a/b-binding protein OS=Glycine max GN=lhcb1*7 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.188e-23
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSL+  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  113 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 178

[Close]

BLAST of HO067202 vs. TrEMBL
Match: Q41422_SOLTU (Chlorophyll a/b binding protein OS=Solanum tuberosum GN=Lhcb1-1 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.188e-23
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSLV  QSIL IWA QV+LMGAVEGYR AGG
Sbjct:  114 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG 179

[Close]

BLAST of HO067202 vs. TrEMBL
Match: C6TNE6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.188e-23
Identity = 54/66 (81.82%), Postives = 56/66 (84.85%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LSR  VKFGEAVWFKAGSQ F EGGLDY GNPSL+  QSIL IWA QVILMGAVEGYR AGG
Sbjct:  112 FPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGG 177

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT2G34420.1 (| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265)

HSP 1 Score: 106.686 bits (265), Expect = 3.047e-24
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = -1

Query:    6 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAG 200
            FPE+L+R  VKFGEAVWFKAGSQ F +GGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AG
Sbjct:  113 FPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 177

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT2G34430.1 (| Symbols: LHB1B1, LHCB1.4 | light-harvesting chlorophyll-protein complex II subunit B1 | chr2:14524818-14525618 FORWARD LENGTH=266)

HSP 1 Score: 106.686 bits (265), Expect = 3.047e-24
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = -1

Query:    6 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAG 200
            FPE+L+R  VKFGEAVWFKAGSQ F +GGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AG
Sbjct:  114 FPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 178

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT1G29930.1 (| Symbols: CAB1, AB140, CAB140, LHCB1.3 | chlorophyll A/B binding protein 1 | chr1:10478071-10478874 FORWARD LENGTH=267)

HSP 1 Score: 106.686 bits (265), Expect = 3.047e-24
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = -1

Query:    6 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAG 200
            FPE+L+R  VKFGEAVWFKAGSQ F +GGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AG
Sbjct:  115 FPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 179

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT1G29920.1 (| Symbols: CAB2, AB165, LHCB1.1 | chlorophyll A/B-binding protein 2 | chr1:10475089-10475892 REVERSE LENGTH=267)

HSP 1 Score: 106.686 bits (265), Expect = 3.047e-24
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = -1

Query:    6 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAG 200
            FPE+L+R  VKFGEAVWFKAGSQ F +GGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AG
Sbjct:  115 FPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 179

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT1G29910.1 (| Symbols: CAB3, AB180, LHCB1.2 | chlorophyll A/B binding protein 3 | chr1:10472443-10473246 REVERSE LENGTH=267)

HSP 1 Score: 106.686 bits (265), Expect = 3.047e-24
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = -1

Query:    6 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAG 200
            FPE+L+R  VKFGEAVWFKAGSQ F +GGLDY GNPSLV  QSIL IWA QVILMGAVEGYR AG
Sbjct:  115 FPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 179

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT2G05070.1 (| Symbols: LHCB2.2, LHCB2 | photosystem II light harvesting complex gene 2.2 | chr2:1799436-1800329 REVERSE LENGTH=265)

HSP 1 Score: 105.145 bits (261), Expect = 8.865e-24
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LS+  VKFGEAVWFKAGSQ F EGGLDY GNP+L+  QSIL IWA QV+LMG +EGYR  GG
Sbjct:  114 FPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGG 179

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT2G05100.1 (| Symbols: LHCB2.1, LHCB2 | photosystem II light harvesting complex gene 2.1 | chr2:1823449-1824331 REVERSE LENGTH=265)

HSP 1 Score: 105.145 bits (261), Expect = 8.865e-24
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LS+  VKFGEAVWFKAGSQ F EGGLDY GNP+L+  QSIL IWA QV+LMG +EGYR  GG
Sbjct:  114 FPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGG 179

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT3G27690.1 (| Symbols: LHCB2.4, LHCB2.3, LHCB2 | photosystem II light harvesting complex gene 2.3 | chr3:10256002-10256921 FORWARD LENGTH=266)

HSP 1 Score: 104.76 bits (260), Expect = 1.158e-23
Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = -1

Query:    3 FPEVLSRXXVKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAGG 200
            FPE+LS+  VKFGEAVWFKAGSQ F EGGLDY GNP+L+  QSIL IWA QV+LMG +EGYR  GG
Sbjct:  115 FPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGG 180

[Close]

BLAST of HO067202 vs. TAIR peptide
Match: AT5G54270.1 (| Symbols: LHCB3, LHCB3*1 | light-harvesting chlorophyll B-binding protein 3 | chr5:22038424-22039383 FORWARD LENGTH=265)

HSP 1 Score: 82.4185 bits (202), Expect = 6.154e-17
Identity = 43/65 (66.15%), Postives = 47/65 (72.31%), Query Frame = -1

Query:    6 PEVLSRXX-VKFGEAVWFKAGSQXFXEGGLDYWGNPSLVXXQSILXIWAFQVILMGAVEGYRXAG 197
            PEVL +   V F E VWFKAGSQ F EGGLDY GNP+LV  QSIL +  FQVILMG VEG+R  G
Sbjct:  113 PEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRING 177

The following BLAST results are available for this feature:

BLAST of HO067202 vs. SwissProt
BLAST of HO067202 vs. TrEMBL
BLAST of HO067202 vs. TAIR peptide

BLAST of HO067202 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
CB28_PEA	1.592e-24	83.33	Chlorophyll a-b binding protein 8, chloroplastic O...	[more]
CB22_PEA	1.592e-24	83.33	Chlorophyll a-b binding protein AB80, chloroplasti...	[more]
CB21_PEA	1.592e-24	83.33	Chlorophyll a-b binding protein AB96 (Fragment) OS...	[more]
CB23_SOYBN	2.079e-24	81.82	Chlorophyll a-b binding protein 3, chloroplastic O...	[more]
CB22_CUCSA	2.079e-24	81.82	Chlorophyll a-b binding protein of LHCII type 1 (F...	[more]
CB21_CUCSA	2.079e-24	81.82	Chlorophyll a-b binding protein of LHCII type I, c...	[more]
CB21_MAIZE	2.716e-24	80.30	Chlorophyll a-b binding protein 1, chloroplastic O...	[more]
CB2A_SPIOL	3.547e-24	81.82	Chlorophyll a-b binding protein, chloroplastic OS=...	[more]
CB23_APIGR	3.547e-24	81.82	Chlorophyll a-b binding protein, chloroplastic OS=...	[more]
CB22_TOBAC	3.547e-24	81.82	Chlorophyll a-b binding protein 21, chloroplastic ...	[more]

BLAST of HO067202 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q6T705_TRIPR	3.207e-23	83.33	Chlorophyll a/b binding protein OS=Trifolium prate...	[more]
Q39831_SOYBN	3.207e-23	83.33	Chlorophyll a/b-binding protein OS=Glycine max GN=...	[more]
O81391_MEDSA	3.207e-23	83.33	Chlorophyll a/b binding protein OS=Medicago sativa...	[more]
O80388_CRYJA	3.207e-23	83.33	Light-harvesting chlorophyll a/b-binding protein o...	[more]
C6TLM4_SOYBN	3.207e-23	83.33	Putative uncharacterized protein OS=Glycine max PE...	[more]
A3F6K2_PEA	3.207e-23	83.33	Chloroplast chlorophyll a/b binding protein OS=Pis...	[more]
Q9ZP08_CICAR	4.188e-23	81.82	Chlorophyll a/b binding protein OS=Cicer arietinum...	[more]
Q43437_SOYBN	4.188e-23	81.82	Photosystem II type I chlorophyll a/b-binding prot...	[more]
Q41422_SOLTU	4.188e-23	81.82	Chlorophyll a/b binding protein OS=Solanum tuberos...	[more]
C6TNE6_SOYBN	4.188e-23	81.82	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of HO067202 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 9


Match Name	E-value	Identity	Description
AT2G34420.1	3.047e-24	80.00	\| Symbols: LHB1B2, LHCB1.5 \| photosystem II light ...	[more]
AT2G34430.1	3.047e-24	80.00	\| Symbols: LHB1B1, LHCB1.4 \| light-harvesting chlo...	[more]
AT1G29930.1	3.047e-24	80.00	\| Symbols: CAB1, AB140, CAB140, LHCB1.3 \| chloroph...	[more]
AT1G29920.1	3.047e-24	80.00	\| Symbols: CAB2, AB165, LHCB1.1 \| chlorophyll A/B-...	[more]
AT1G29910.1	3.047e-24	80.00	\| Symbols: CAB3, AB180, LHCB1.2 \| chlorophyll A/B ...	[more]
AT2G05070.1	8.865e-24	72.73	\| Symbols: LHCB2.2, LHCB2 \| photosystem II light h...	[more]
AT2G05100.1	8.865e-24	72.73	\| Symbols: LHCB2.1, LHCB2 \| photosystem II light h...	[more]
AT3G27690.1	1.158e-23	72.73	\| Symbols: LHCB2.4, LHCB2.3, LHCB2 \| photosystem I...	[more]
AT5G54270.1	6.154e-17	66.15	\| Symbols: LHCB3, LHCB3*1 \| light-harvesting chlor...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 5..77 score: 1.3
None	No IPR available	GENE3D	1.10.3460.10	no description	coord: 5..76 score: 2
None	No IPR available	SEG	seg	seg	coord: 1..10 score
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 5..75 score: 2.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067202 ID=HO067202; Name=HO067202; organism=Cicer arietinum; type=EST; length=230bp
GGCCCACCAGCNATACGGTAACCCTCNACAGCACCCATTAGGATAACTTG
GAAAGCCCAAATAGNAAGAATGCTTTGNGNGNGAACTAAACTTGGATTAC
CCCAGTAGTCGAGCCCNCCTTCANTAAANANTTGGGATCCAGCTTTGAAC
CACACAGCCTCNCCAAATTTAACNNCNTTGCGTGACAACACTTCCGGAAA
CNCNCATCCCAAGGCCCCCCCCCCGTACCC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln

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