GR914996

EST Overview
NameGR914996
Unique NameGR914996
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length245
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR914996 vs. TrEMBL
Match: Q6L3N8_SOLDE (Putative gag-pol polyprotein, identical OS=Solanum demissum GN=SDM1_42t00010 PE=4 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.800e-17
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = -3
Query:   16 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEVIVKIVM 243
            LGD KQ+ +EG+GT+ IK  Q N K LYDVQYVP LA NLLSVGQL+ SGYSV+  ++ C I DK+S   I ++ M
Sbjct:  341 LGDDKQVHIEGKGTVEIKTVQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPM 416          
BLAST of GR914996 vs. TrEMBL
Match: A5AWP3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020777 PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.330e-16
Identity = 42/78 (53.85%), Postives = 58/78 (74.36%), Query Frame = -3
Query:   10 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEVIVKIVMVS 243
            LGD KQ++VEG+GT A+     N KLLY+V ++P+L QNLLSVGQL+ SGYS+L +   C+I DKKS ++IV + M +
Sbjct:  321 LGDDKQVQVEGKGTXAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAA 398          
BLAST of GR914996 vs. TrEMBL
Match: A5BT67_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020406 PE=4 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.269e-16
Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = -3
Query:   10 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEVIVKIVMVS 243
            LGD KQ++VEG+GT+A+     N KLLY+V ++P+L QNLLSVGQL+ SGYS+L +   C+I DKKS ++I  + M +
Sbjct:  270 LGDDKQVQVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIFDVRMAA 347          
BLAST of GR914996 vs. TrEMBL
Match: A5BNA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002093 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.871e-16
Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = -3
Query:   10 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEVIVKIVMVS 243
            LGD KQ+ VEG+GT+A+     N KLLY+V ++P+L QNLLSVGQL+ SGYS+L +   C+I DKK  ++IV + M +
Sbjct:  322 LGDDKQVXVEGKGTVAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAA 399          
BLAST of GR914996 vs. TrEMBL
Match: A5AL21_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031870 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.623e-16
Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = -3
Query:   10 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEVIVKIVMVS 243
            LGD KQ+ VEG+G +A+     N KLLY+V ++P+L QNLLSVGQL+ SGYS+L +   C+I DKKS ++IV + M +
Sbjct:  336 LGDDKQVXVEGKGIMAVNNGHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAA 413          
BLAST of GR914996 vs. TrEMBL
Match: B6REL8_9BRAS (Integrase OS=Boechera divaricarpa GN=TnInt1 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.198e-11
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -3
Query:   10 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEVIVKIVMVS 243
            LG+ K+++VEGRG +A+     N KL+Y V Y+P+LA NLLSVGQ++ +  SVL + + C+I +KKS   +  +   S
Sbjct:  177 LGNDKEVQVEGRGVVAVHNGHGNLKLIYGVYYIPDLAHNLLSVGQMVENNCSVLFDGNECVIKEKKSGVTLAMVKKTS 254          
BLAST of GR914996 vs. TrEMBL
Match: A5AJD6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029281 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.198e-11
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = -3
Query:   34 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEV 243
            +G+G+ + V G+GT+AI+    + KL+ DV +VPN+ QNLLSVGQLL  G+ VL E+ FC+I D   K V
Sbjct:  127 IGNGEYISVRGKGTVAIE-SLSSLKLILDVLFVPNIDQNLLSVGQLLEKGFKVLFEDKFCMIKDANGKNV 195          
BLAST of GR914996 vs. TrEMBL
Match: A5AGS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031396 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.749e-11
Identity = 35/72 (48.61%), Postives = 50/72 (69.44%), Query Frame = -3
Query:   28 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEVIV 243
            +G+G  L V+G+GT+AI+      KL+ +V YVP + QNLLSVGQLL  GY VL E++ C+I D + +EV +
Sbjct:  269 IGNGAYLVVKGKGTVAIEGHT-GLKLISNVLYVPEINQNLLSVGQLLEKGYKVLFEDNHCMIADAQGREVFI 339          
BLAST of GR914996 vs. TrEMBL
Match: D7UBX5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_74.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034745001 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.425e-10
Identity = 36/76 (47.37%), Postives = 55/76 (72.37%), Query Frame = -3
Query:   16 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEVIVKIVM 243
            LG+G+ ++ +G+GTIAI  ++R TK++ +V Y+P+L QNLLSV Q+L +GY+V  + +FC I +   KE I KI M
Sbjct:  365 LGNGEVVQAKGKGTIAISTKRR-TKIVTNVLYIPDLDQNLLSVAQMLRNGYAVFFKGNFCFITNVHGKE-IAKIKM 438          
BLAST of GR914996 vs. TrEMBL
Match: A5ARB0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001149 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.425e-10
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = -3
Query:   34 LGDGKQLEVEGRGTIAIKPEQRNTKLLYDVQYVPNLAQNLLSVGQLLNSGYSVLLENDFCLICDKKSKEV 243
            +G+G+ + V+G+GT+AIK  Q   KL+YDV +VP++ QNLLSVGQL+   + V  E+  C+I D + KEV
Sbjct:  303 IGNGEYIPVKGKGTVAIK-SQTGLKLIYDVLFVPDIDQNLLSVGQLVEKEFKVYFEDRNCIIKDAEGKEV 371          
The following BLAST results are available for this feature:
BLAST of GR914996 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q6L3N8_SOLDE7.800e-1757.89Putative gag-pol polyprotein, identical OS=Solanum... [more]
A5AWP3_VITVI1.330e-1653.85Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BT67_VITVI2.269e-1652.56Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BNA8_VITVI3.871e-1652.56Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AL21_VITVI8.623e-1652.56Putative uncharacterized protein OS=Vitis vinifera... [more]
B6REL8_9BRAS2.198e-1143.59Integrase OS=Boechera divaricarpa GN=TnInt1 PE=4 S... [more]
A5AJD6_VITVI2.198e-1150.00Putative uncharacterized protein OS=Vitis vinifera... [more]
A5AGS2_VITVI3.749e-1148.61Putative uncharacterized protein OS=Vitis vinifera... [more]
D7UBX5_VITVI1.425e-1047.37Whole genome shotgun sequence of line PN40024, sca... [more]
A5ARB0_VITVI1.425e-1048.57Putative uncharacterized protein OS=Vitis vinifera... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..62
score: 2.9

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR914996 ID=GR914996; Name=GR914996; organism=Cicer arietinum; type=EST; length=245bp
TCCAAGTGTGCTCACCATAACAATCTTTACTATAACTTCTTTCGATTTCT
TATCACAGATCAAACAAAAATCATTCTCAAGCAGTACTGAATATCCAGAA
TTGAGTAATTGACCCACACTCAACAAATTTTGAGCCAAATTTGGCACATA
CTGCACATCATATAAGAGCTTAGTGTTTCTTTGCTCAGGTTTGATCGCAA
TCGTGCCTCTTCCTTCCACTTCAAGTTGCTTTCCATCTCCAAGCC
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