GR404227

EST Overview
NameGR404227
Unique NameGR404227
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length671
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR404227 vs. TrEMBL
Match: B9SWA1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0265510 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.401e-23
Identity = 53/91 (58.24%), Postives = 71/91 (78.02%), Query Frame = -3
Query:  397 RNNDPNASGIIGDDVEACKGVTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMIHGSGTNPPIFAEKQICQ 669
            R+N  NA+G   DD +    + T+DTN+ TGF+++ET+TNPIDRSIAHLLFHRPSDPS++PL+D L  KS  M+HGS T+PP+ ++ QICQ
Sbjct:  533 RHNCGNANGGKQDDRDTSGQLITEDTNKGTGFLDIETDTNPIDRSIAHLLFHRPSDPSLIPLNDALSLKSHTMVHGSITSPPVISKDQICQ 623          
BLAST of GR404227 vs. TrEMBL
Match: D7TG42_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_178.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003081001 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.701e-17
Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = -3
Query:  403 RNNDPNASGIIGDDVEACKGVTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMIHGSGTNPPIFAEKQI 669
            R+N  + +    DD +    +   + N+CTGF++MET+TNPIDRSIAHLLFHRPSDPS++P +D L  KS  M+ GS T+PP+ AEK +
Sbjct:   44 RHNCGSLNSSSRDDGDTGGLLMAAEPNKCTGFMDMETDTNPIDRSIAHLLFHRPSDPSIVP-NDALSLKSQNMMQGSITSPPVVAEKLV 131          
BLAST of GR404227 vs. TrEMBL
Match: D7MR83_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496615 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.105e-11
Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = -3
Query:  406 VTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMIHGSGTNPPIFAEKQ 609
            + T +T++  GF+++ET+TNPIDRSIAHLLFHRPSD S+   +++L +KS  MI    ++P +  EKQ
Sbjct:  531 LVTGETDKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSLSSDNNVLSYKSHPMIPQPNSSPSLRMEKQ 598          
BLAST of GR404227 vs. TrEMBL
Match: B9GF95_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_838936 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.776e-10
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = -3
Query:  448 RNNDPNASGIIGDDVEACKGVTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMI 669
            R+N  N SG   D  +    +  ++ ++ TG ++MET+TNPIDRSIAHLLFHRPSDPS++P  D    KS  M+
Sbjct:  463 RHNHRNGSGGKRDGGDRSGELMAEEADK-TGLMDMETDTNPIDRSIAHLLFHRPSDPSLMPAIDASSLKSHTMV 535          
BLAST of GR404227 vs. TrEMBL
Match: Q9FMI3_ARATH (At5g64170 OS=Arabidopsis thaliana GN=At5g64170 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.320e-10
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = -3
Query:  406 VTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMIHGSGTNPPIFAEKQ 609
            + T + ++  GF+++ET+TNPIDRSIAHLLFHRPSD S+   +++L +KS  MI    ++P +  EKQ
Sbjct:  481 LVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSLSSDNNVLSYKSHPMIPQPNSSPSLRIEKQ 548          
BLAST of GR404227 vs. TrEMBL
Match: B9DGM4_ARATH (AT5G64170 protein OS=Arabidopsis thaliana GN=AT5G64170 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.320e-10
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = -3
Query:  406 VTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMIHGSGTNPPIFAEKQ 609
            + T + ++  GF+++ET+TNPIDRSIAHLLFHRPSD S+   +++L +KS  MI    ++P +  EKQ
Sbjct:  531 LVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSLSSDNNVLSYKSHPMIPQPNSSPSLRIEKQ 598          
BLAST of GR404227 vs. TrEMBL
Match: A8MQN2_ARATH (Uncharacterized protein At5g64170.2 OS=Arabidopsis thaliana GN=At5g64170 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.320e-10
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = -3
Query:  406 VTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMIHGSGTNPPIFAEKQ 609
            + T + ++  GF+++ET+TNPIDRSIAHLLFHRPSD S+   +++L +KS  MI    ++P +  EKQ
Sbjct:  531 LVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSLSSDNNVLSYKSHPMIPQPNSSPSLRIEKQ 598          
BLAST of GR404227 vs. TAIR peptide
Match: AT5G64170.2 (| Symbols: | dentin sialophosphoprotein-related | chr5:25672904-25675934 REVERSE LENGTH=616)

HSP 1 Score: 69.707 bits (169), Expect = 1.606e-12
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = -3
Query:  406 VTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMIHGSGTNPPIFAEKQ 609
            + T + ++  GF+++ET+TNPIDRSIAHLLFHRPSD S+   +++L +KS  MI    ++P +  EKQ
Sbjct:  531 LVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSLSSDNNVLSYKSHPMIPQPNSSPSLRIEKQ 598          
BLAST of GR404227 vs. TAIR peptide
Match: AT5G64170.1 (| Symbols: | dentin sialophosphoprotein-related | chr5:25672904-25675445 REVERSE LENGTH=566)

HSP 1 Score: 69.707 bits (169), Expect = 1.606e-12
Identity = 33/68 (48.53%), Postives = 49/68 (72.06%), Query Frame = -3
Query:  406 VTTQDTNRCTGFINMETNTNPIDRSIAHLLFHRPSDPSMLPLSDILPFKSSYMIHGSGTNPPIFAEKQ 609
            + T + ++  GF+++ET+TNPIDRSIAHLLFHRPSD S+   +++L +KS  MI    ++P +  EKQ
Sbjct:  481 LVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSLSSDNNVLSYKSHPMIPQPNSSPSLRIEKQ 548          
The following BLAST results are available for this feature:
BLAST of GR404227 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9SWA1_RICCO1.401e-2358.24Putative uncharacterized protein OS=Ricinus commun... [more]
D7TG42_VITVI5.701e-1751.69Whole genome shotgun sequence of line PN40024, sca... [more]
D7MR83_ARALY6.105e-1150.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9GF95_POPTR1.776e-1048.65Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q9FMI3_ARATH2.320e-1048.53At5g64170 OS=Arabidopsis thaliana GN=At5g64170 PE=... [more]
B9DGM4_ARATH2.320e-1048.53AT5G64170 protein OS=Arabidopsis thaliana GN=AT5G6... [more]
A8MQN2_ARATH2.320e-1048.53Uncharacterized protein At5g64170.2 OS=Arabidopsis... [more]
back to top
BLAST of GR404227 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G64170.21.606e-1248.53| Symbols: | dentin sialophosphoprotein-related |... [more]
AT5G64170.11.606e-1248.53| Symbols: | dentin sialophosphoprotein-related |... [more]
back to top
Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR404227 ID=GR404227; Name=GR404227; organism=Cicer arietinum; type=EST; length=671bp
GTATGAAGTGCTCCAGCCTTGAAGAAAGCAAAAACTTTTGCCTTACCAAA
GCCTTTTGGTCACAACTGCGTGGACAATTGATTGGTGGTCCACTTATCAA
TTCGATGGCCTTGCTTAAAAACATTCGTGAAGAGAGAGTTGGGCATTAAT
GTAGCATTACTCTACATCATATACGCCTCCTTCTATAGATTAGAATCACA
ATATACATCAGTGTAATAGGATCAATGCAAAATTTAAATGGATCTCTGAG
TTAGCCTGGAATGATTTATATACAATATATGATATGATGACTTAATTGAA
AAGACATTGGACCCCGGGCTAATGCCAATGCTAGATTCAGTTATCACAAT
GTGATACCCTTCAAGACTAAGTCTCTACTCCGCCAGACGATTCTTCCTGA
CAAATCTGTTTCTCAGCAAATATTGGTGGATTGGTCCCTGATCCGTGTAT
CATGTAACTGGATTTGAAAGGTAAAATATCACTAAGGGGCAACATTGATG
GATCTGAGGGCCTATGAAACAATAAGTGTGCTATAGACCGATCAATGGGA
TTTGTATTAGTTTCCATATTAATGAATCCCGTACACCTGTTTGTATCCTG
TGTCGTTACTCCTTTGCATGCCTCAACATCATCACCTATTATACCACTTG
CATTGGGATCATTGTTTCTTT
back to top