CK148839

EST Overview
NameCK148839
Unique NameCK148839
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length631
Libraries
Library NameType
LIBEST_014674 Suppressive subtractive hybridization librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of CK148839 vs. TrEMBL
Match: B9RKL9_RICCO (Elongation factor Ts OS=Ricinus communis GN=RCOM_1051260 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.479e-13
Identity = 74/242 (30.58%), Postives = 105/242 (43.39%), Query Frame = 3
Query:    3 LTMKKEGAVVELDKALAQ--QGGVDVATNPFVLAFRKNKDISAFLDEREKIQSEVXXXXXXXXXXXXXGDVELTDDVSSAL------------TDSAEVDISKTEEDXXXXXXXXXXXXXXXDDESNQGSINGATVKETEAVSETLAPEEDLSAAVP-----------IIEEVIQTDTAASDVKT----------DSPIEVADENVIENVTEEFAAATQLASDAIEPVTESDITSSAPAPQE 623
            LTMKKE    E +K   +  QG V  ATNPFVLAFRKN+DIS+FL+EREK++                   + T+ VS  L            +DS    +++T  D               DDE   GSI  ++ +  EA  +T+  E + S+  P           I E+   TD   SD K+           +P+  A E V+EN   E     +L +    P+ E++I+S AP   E
Sbjct:  334 LTMKKE----EDNKLNTELLQGVVHAATNPFVLAFRKNRDISSFLEEREKMEKVANQPVEPKIPVEVGEQEKQTETVSDILEVQGQPSSSNEGSDSVTSTVAETLVDETSPKEVAEEPSIAGDDEV-PGSIESSSPQSVEAAVQTVEKEAEESSGTPDPIGSVSTADNITEQTPLTDEMGSDGKSGPYGEISSEVSTPVSPAAEEVVENQLGESITNEELQT----PIAENEISSIAPVEDE 566          
BLAST of CK148839 vs. TrEMBL
Match: B9ILQ4_POPTR (Elongation factor Ts (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_261946 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.702e-7
Identity = 63/221 (28.51%), Postives = 91/221 (41.18%), Query Frame = 3
Query:    3 LTMKKEGAVVELDKALAQ--QGGVDVATNPFVLAFRKNKDISAFLDEREKIQSEVXXXXXXXXXXXXXGDVE-------------LTDDVSSALTDSAEVDISKTEEDXXXXXXXXXXXXXXXDDESNQGSINGA--TVKETEAVSETLAPEEDLSAAVPIIEEVIQT----DTAASDVKTDSPIEVADENVIENV--TEEFAAATQLASDAIEPVTESDI 596
            LTMKKE A    DK   +  QG V  ATNPF+LAFRKNKDI+AFLDERE I +E                 E               D+VSS +    +  +   E                   E+ + S++    TV++   V+    PE   S+    +++ +QT      A  D + +S      +N  + V   E+ A A     ++IE  T S +
Sbjct:  330 LTMKKEDA----DKRDTELIQGIVHTATNPFMLAFRKNKDIAAFLDERE-IATEQPEKPIPSVQIGEKNQAEPLPNIAEVQDQPVSNDEVSSGIPSMVDESVEGDETSLKEVVVGANVASDEKQPETVESSVDSTLQTVEKEAEVTGYKEPESIESSTPQNVDDTVQTLEKKAVADDDKEPESMESSTSQNADDTVQALEKEAEANDKEPESIESTTISPV 545          
BLAST of CK148839 vs. TAIR peptide
Match: AT4G29060.2 (| Symbols: emb2726 | elongation factor Ts family protein | chr4:14317744-14321315 FORWARD LENGTH=709)

HSP 1 Score: 53.9138 bits (128), Expect = 8.202e-8
Identity = 60/211 (28.44%), Postives = 89/211 (42.18%), Query Frame = 3
Query:    3 LTMKKEGAVVELDKALAQQGGVDVATNPFVLAFRKNKDISAFLDEREKIQSEVXXXXXXXXXXXXXGDVELTD-DVSSALTDSAEVDISKTEEDXXXXXXXXXXXXXXXDDESNQGSINGATVKETEAVSETLAPEEDLSAAVPIIEEVIQTDTAASDVKTDSPIEVADENVIEN-VTEEFAAATQLASDAIEP---VTESDITS-SAPAP 617
            LTMK+E    + D+   Q G V  ATNPF+LAFRKN++I+AFLD+RE    E               +  +T  +V  ++   AEV   +                   +D+S           E E  +ETLA   +    VP I E            T S  E+ + ++  N  T+E ++   LAS+ +E    V E+ +     PAP
Sbjct:  315 LTMKEEDDG-KFDETTTQ-GVVHTATNPFMLAFRKNEEIAAFLDKRE----EEAEKPPVETPVEPEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAEDDS----------PEKEEQTETLAAAAEAEEVVPPIPE------------TKSEEEIVENSIPPNSATDEVSSPEALASEEVEKEQVVAETPVDEVKTPAP 497          
BLAST of CK148839 vs. TAIR peptide
Match: AT4G29060.1 (| Symbols: emb2726 | elongation factor Ts family protein | chr4:14317744-14321315 FORWARD LENGTH=953)

HSP 1 Score: 53.9138 bits (128), Expect = 8.202e-8
Identity = 60/211 (28.44%), Postives = 89/211 (42.18%), Query Frame = 3
Query:    3 LTMKKEGAVVELDKALAQQGGVDVATNPFVLAFRKNKDISAFLDEREKIQSEVXXXXXXXXXXXXXGDVELTD-DVSSALTDSAEVDISKTEEDXXXXXXXXXXXXXXXDDESNQGSINGATVKETEAVSETLAPEEDLSAAVPIIEEVIQTDTAASDVKTDSPIEVADENVIEN-VTEEFAAATQLASDAIEP---VTESDITS-SAPAP 617
            LTMK+E    + D+   Q G V  ATNPF+LAFRKN++I+AFLD+RE    E               +  +T  +V  ++   AEV   +                   +D+S           E E  +ETLA   +    VP I E            T S  E+ + ++  N  T+E ++   LAS+ +E    V E+ +     PAP
Sbjct:  315 LTMKEEDDG-KFDETTTQ-GVVHTATNPFMLAFRKNEEIAAFLDKRE----EEAEKPPVETPVEPEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAEDDS----------PEKEEQTETLAAAAEAEEVVPPIPE------------TKSEEEIVENSIPPNSATDEVSSPEALASEEVEKEQVVAETPVDEVKTPAP 497          
The following BLAST results are available for this feature:
BLAST of CK148839 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9RKL9_RICCO1.479e-1330.58Elongation factor Ts OS=Ricinus communis GN=RCOM_1... [more]
B9ILQ4_POPTR2.702e-728.51Elongation factor Ts (Fragment) OS=Populus trichoc... [more]
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BLAST of CK148839 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G29060.28.202e-828.44| Symbols: emb2726 | elongation factor Ts family p... [more]
AT4G29060.18.202e-828.44| Symbols: emb2726 | elongation factor Ts family p... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 54..66
score: NAcoord: 94..108
score
NoneNo IPR availableSEGsegsegcoord: 33..47
score
NoneNo IPR availableSEGsegsegcoord: 75..99
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CK148839 ID=CK148839; Name=CK148839; organism=Cicer arietinum; type=EST; length=631bp
CATTGACTATGAAGAAGGAAGGAGCTGTTGTGGAATTGGACAAGGCACTT
GCACAACAAGGGGGTGTTGATGTTGCAACAAACCCTTTTGTATTGGCTTT
TCGTAAAAATAAGGATATTTCTGCTTTTCTGGATGAGAGGGAGAAAATTC
AGAGCGAAGTTAAAAAATCGTCAACTACAGAAACATCGGAAGAAAGTAAG
GGAGATGTCGAGTTAACAGACGATGTTTCTTCTGCGTTAACAGATAGTGC
TGAAGTTGATATCTCTAAAACTGAGGAAGATGTTGTGGGAGCTAGTTCAT
CGGTTGGTTCCTCAACAACTGTTGCAGACGATGAAAGCAACCAAGGAAGT
ATAAATGGTGCCACTGTTAAGGAAACGGAGGCGGTTTCTGAAACGTTGGC
TCCCGAAGAGGATTTATCTGCTGCAGTTCCAATTATCGAGGAAGTTATTC
AGACAGATACTGCAGCAAGCGATGTAAAAACTGACTCGCCTATTGAAGTA
GCCGATGAAAATGTAATAGAAAATGTAACCGAAGAATTTGCAGCTGCAAC
ACAGTTAGCCAGTGATGCAATTGAGCCTGTTACAGAATCAGACATTACAT
CAAGTGCACCAGCTCCCCAAGAAATAGCAGT
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