GT620258
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT620258 vs. TrEMBL
Match: B9RNG2_RICCO (Heat shock protein binding protein, putative OS=Ricinus communis GN=RCOM_1347440 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.340e-12 Identity = 35/52 (67.31%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 1 ENDQSQSLISSCTVNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 EN + S T N +VFQGVFCRDLA VGNLL+Q GFNRP+PVKYEAL C Sbjct: 536 ENKPAAVKTPSGTTNQSVFQGVFCRDLATVGNLLSQAGFNRPVPVKYEALRC 587
BLAST of GT620258 vs. TrEMBL
Match: D7U2G8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028103001 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.267e-11 Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 37 TVNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 T +VFQGVFCRDLAVVGNLL+Q GFNR IPVKYEALSC Sbjct: 519 TSTASVFQGVFCRDLAVVGNLLSQAGFNRQIPVKYEALSC 558
BLAST of GT620258 vs. TrEMBL
Match: B9I9K7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774720 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.267e-11 Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 4 NDQSQSLISSCTVNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 ND S S+ + VFQGVFCRDLA VGNLL+Q GF+RPIP+KYEALSC Sbjct: 484 NDNKVSSASAGSTAAPVFQGVFCRDLAAVGNLLSQGGFSRPIPMKYEALSC 534
BLAST of GT620258 vs. TrEMBL
Match: A5C448_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036192 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.267e-11 Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 37 TVNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 T +VFQGVFCRDLAVVGNLL+Q GFNR IPVKYEALSC Sbjct: 503 TSTASVFQGVFCRDLAVVGNLLSQAGFNRQIPVKYEALSC 542
BLAST of GT620258 vs. TrEMBL
Match: B9GSH4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552515 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.110e-10 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 4 NDQSQSLISSCTVNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 N+ + SS + +VFQGVFCRDLA VGNLL+Q GFNRP+ VK+EALSC Sbjct: 519 NENKVASASSGSNTASVFQGVFCRDLAAVGNLLSQAGFNRPLAVKFEALSC 569
BLAST of GT620258 vs. TrEMBL
Match: O22266_ARATH (Putative uncharacterized protein At2g47440 OS=Arabidopsis thaliana GN=At2g47440 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.062e-10 Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 40 VNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 VN +QGVFCRDLA VGNLLT+ GFN PIPVKYEAL+C Sbjct: 488 VNSNAYQGVFCRDLAAVGNLLTRAGFNHPIPVKYEALTC 526
BLAST of GT620258 vs. TrEMBL
Match: D7LGN0_ARALY (DNAJ heat shock N-terminal domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483921 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.062e-10 Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 40 VNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 VN +QGVFCRDLA VGNLLT+ GFN PIPVKYEAL+C Sbjct: 487 VNSNAYQGVFCRDLAAVGNLLTRAGFNHPIPVKYEALTC 525
BLAST of GT620258 vs. TrEMBL
Match: D7LT73_ARALY (DNAJ heat shock N-terminal domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486757 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.707e-8 Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 43 NPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 N FQGVFCRDLA VG+LL++ GFN+PIP+KY+A+SC Sbjct: 514 NSNAFQGVFCRDLAAVGSLLSRTGFNQPIPMKYDAISC 551
BLAST of GT620258 vs. TrEMBL
Match: D7M452_ARALY (DNAJ heat shock N-terminal domain-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490370 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.229e-8 Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 1 Query: 28 SSCTVNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 +S N V +GVFCRDL VVG+L+ + GFN+PIPVKYEALSC Sbjct: 502 NSTNNNTNVVKGVFCRDLTVVGSLIARTGFNQPIPVKYEALSC 544
BLAST of GT620258 vs. TrEMBL
Match: Q84VX5_ARATH (At4g02100 OS=Arabidopsis thaliana GN=At4g02100 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.911e-8 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 1 Query: 43 NPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 N V +GVFCRDL VVG+L+ + GFN+PIPVKYEALSC Sbjct: 509 NTNVVKGVFCRDLTVVGSLIARTGFNQPIPVKYEALSC 546
BLAST of GT620258 vs. TAIR peptide
Match: AT2G47440.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:19469912-19471660 FORWARD LENGTH=526) HSP 1 Score: 67.781 bits (164), Expect = 1.597e-12 Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 40 VNPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 VN +QGVFCRDLA VGNLLT+ GFN PIPVKYEAL+C Sbjct: 488 VNSNAYQGVFCRDLAAVGNLLTRAGFNHPIPVKYEALTC 526
BLAST of GT620258 vs. TAIR peptide
Match: AT4G02100.1 (| Symbols: | Heat shock protein DnaJ with tetratricopeptide repeat | chr4:930228-932049 FORWARD LENGTH=546) HSP 1 Score: 61.6178 bits (148), Expect = 1.144e-10 Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 1 Query: 43 NPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 N V +GVFCRDL VVG+L+ + GFN+PIPVKYEALSC Sbjct: 509 NTNVVKGVFCRDLTVVGSLIARTGFNQPIPVKYEALSC 546
BLAST of GT620258 vs. TAIR peptide
Match: AT3G62570.1 (| Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:23142616-23144563 FORWARD LENGTH=552) HSP 1 Score: 61.2326 bits (147), Expect = 1.495e-10 Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 43 NPAVFQGVFCRDLAVVGNLLTQVGFNRPIPVKYEALSC 156 N +QGVFCRDLA VG+LL++ GFN+PIP+KY+A+SC Sbjct: 515 NSNAYQGVFCRDLAAVGSLLSRTGFNQPIPMKYDAISC 552 The following BLAST results are available for this feature:
BLAST of GT620258 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT620258 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT620258 ID=GT620258; Name=GT620258; organism=Lens culinaris; type=EST; length=288bpback to top |