GR400064
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR400064 vs. TrEMBL
Match: B9RW13_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1175380 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.749e-14 Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = -1 Query: 254 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRADD 430 LS++F+ K+ +G R W+K+PE L+NCSIGFHFPSQS+ + KV P+K+LHFYRAD+ Sbjct: 451 LSEMFKYKIKVGDGRRAWMKSPEVLENCSIGFHFPSQSEGAVQAKVLPLKLLHFYRADE 509
BLAST of GR400064 vs. TrEMBL
Match: D7SRY9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_54.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029526001 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.715e-11 Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = -1 Query: 254 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRADD 430 L ++F+ K+ + W+KNPE+L++CS GF FPSQS E +EKV +K+LHFY AD+ Sbjct: 27 LYEMFKYKIKVSDAHRAWMKNPEELKHCSTGFDFPSQSGETVQEKVSSLKLLHFYSADE 85
BLAST of GR400064 vs. TrEMBL
Match: C5WWG6_SORBI (Putative uncharacterized protein Sb01g018020 OS=Sorghum bicolor GN=Sb01g018020 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.365e-10 Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = -1 Query: 257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRAD 433 SLS++FR K+ + W+K+PE L+NCS G HFPS+ E +EEKV P+K L FY +D Sbjct: 460 SLSEMFRFKMKAIEAHKAWLKSPEVLENCSTGLHFPSEHVENSEEKVMPLKSLAFYASD 518
BLAST of GR400064 vs. TrEMBL
Match: B6SWY4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.365e-10 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = -1 Query: 257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRAD 433 SLS++FR K+ + W+K PE L+NCS G HFPS+ E EEKV P+K L FY AD Sbjct: 458 SLSEMFRFKMKAIEAHKAWLKRPEVLENCSTGLHFPSEHVENPEEKVMPLKSLPFYAAD 516
BLAST of GR400064 vs. TrEMBL
Match: Q9M0I1_ARATH (Putative uncharacterized protein AT4g28260 OS=Arabidopsis thaliana GN=At4g28260 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.195e-9 Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = -1 Query: 257 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKE-----IAEEKVEPIKMLHFYRAD 430 LSQ +R ++ + + R W+KNPE L+NCS GFHFP Q++E + EE+V+ +K++ FYR + Sbjct: 453 LSQTWRFQVKVSEGRKAWVKNPERLKNCSTGFHFPQQAEETEQIPVQEERVQMMKLVRFYRVE 515
BLAST of GR400064 vs. TrEMBL
Match: D7MDL4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491947 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.561e-9 Identity = 28/63 (44.44%), Postives = 43/63 (68.25%), Query Frame = -1 Query: 257 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKE-----IAEEKVEPIKMLHFYRAD 430 LSQ +R ++ + + R W+KNPE L+NCS GFHFP Q+ E + EE+V+ +K++ FYR + Sbjct: 454 LSQTWRFQVKVSEGRKAWVKNPEKLKNCSTGFHFPQQADESGQIPVQEERVQMMKLVRFYRVE 516
BLAST of GR400064 vs. TrEMBL
Match: Q337G3_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g35710 PE=4 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 4.541e-9 Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = -1 Query: 257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRAD 433 SLS++FR KL + W+K+PE L+NCS G HFP++ E +EE+V P+K + FY AD Sbjct: 453 SLSEMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQVIPLKSVAFYAAD 511
BLAST of GR400064 vs. TrEMBL
Match: Q8LNG3_ORYSJ (Putative uncharacterized protein OSJNBa0078O01.8 OS=Oryza sativa subsp. japonica GN=OSJNBa0078O01.8 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.119e-7 Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = -1 Query: 257 SQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRAD 427 S +FR KL + W+K+PE L+NCS G HFP++ E +EE+V P+K + FY AD Sbjct: 381 SGMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQVIPLKSVAFYAAD 437
BLAST of GR400064 vs. TrEMBL
Match: B8BHQ4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34206 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.119e-7 Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = -1 Query: 257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEE-KVEPIKMLHFYRAD 433 SLS++FR KL + W+K+PE L+NCS G HFP++ E +EE +V P+K + FY AD Sbjct: 453 SLSEMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQEVIPLKSVAFYAAD 512
BLAST of GR400064 vs. TrEMBL
Match: A2Z917_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34208 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.119e-7 Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = -1 Query: 257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEE-KVEPIKMLHFYRAD 433 S+SQ+FR KL + W+K+PE L+NCS G HFP++ E +EE +V P+K + FY AD Sbjct: 23 SVSQMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQEVIPLKSVAFYAAD 82
BLAST of GR400064 vs. TAIR peptide
Match: AT4G28260.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:14005048-14006762 FORWARD LENGTH=516) HSP 1 Score: 66.2402 bits (160), Expect = 8.185e-12 Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = -1 Query: 257 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKE-----IAEEKVEPIKMLHFYRAD 430 LSQ +R ++ + + R W+KNPE L+NCS GFHFP Q++E + EE+V+ +K++ FYR + Sbjct: 453 LSQTWRFQVKVSEGRKAWVKNPERLKNCSTGFHFPQQAEETEQIPVQEERVQMMKLVRFYRVE 515
BLAST of GR400064 vs. TAIR peptide
Match: AT4G28260.1 (| Symbols: | unknown protein; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:14005048-14006762 FORWARD LENGTH=516) HSP 1 Score: 66.2402 bits (160), Expect = 8.185e-12 Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = -1 Query: 257 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKE-----IAEEKVEPIKMLHFYRAD 430 LSQ +R ++ + + R W+KNPE L+NCS GFHFP Q++E + EE+V+ +K++ FYR + Sbjct: 453 LSQTWRFQVKVSEGRKAWVKNPERLKNCSTGFHFPQQAEETEQIPVQEERVQMMKLVRFYRVE 515 The following BLAST results are available for this feature:
BLAST of GR400064 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR400064 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR400064 ID=GR400064; Name=GR400064; organism=Cicer arietinum; type=EST; length=445bpback to top |