GR400064

EST Overview
NameGR400064
Unique NameGR400064
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length445
Libraries
Library NameType
LIBEST_024783 ICC4958 Slow drought stresses root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR400064 vs. TrEMBL
Match: B9RW13_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1175380 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.749e-14
Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = -1
Query:  254 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRADD 430
            LS++F+ K+ +G  R  W+K+PE L+NCSIGFHFPSQS+   + KV P+K+LHFYRAD+
Sbjct:  451 LSEMFKYKIKVGDGRRAWMKSPEVLENCSIGFHFPSQSEGAVQAKVLPLKLLHFYRADE 509          
BLAST of GR400064 vs. TrEMBL
Match: D7SRY9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_54.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00029526001 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.715e-11
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = -1
Query:  254 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRADD 430
            L ++F+ K+ +      W+KNPE+L++CS GF FPSQS E  +EKV  +K+LHFY AD+
Sbjct:   27 LYEMFKYKIKVSDAHRAWMKNPEELKHCSTGFDFPSQSGETVQEKVSSLKLLHFYSADE 85          
BLAST of GR400064 vs. TrEMBL
Match: C5WWG6_SORBI (Putative uncharacterized protein Sb01g018020 OS=Sorghum bicolor GN=Sb01g018020 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.365e-10
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = -1
Query:  257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRAD 433
            SLS++FR K+   +    W+K+PE L+NCS G HFPS+  E +EEKV P+K L FY +D
Sbjct:  460 SLSEMFRFKMKAIEAHKAWLKSPEVLENCSTGLHFPSEHVENSEEKVMPLKSLAFYASD 518          
BLAST of GR400064 vs. TrEMBL
Match: B6SWY4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.365e-10
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = -1
Query:  257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRAD 433
            SLS++FR K+   +    W+K PE L+NCS G HFPS+  E  EEKV P+K L FY AD
Sbjct:  458 SLSEMFRFKMKAIEAHKAWLKRPEVLENCSTGLHFPSEHVENPEEKVMPLKSLPFYAAD 516          
BLAST of GR400064 vs. TrEMBL
Match: Q9M0I1_ARATH (Putative uncharacterized protein AT4g28260 OS=Arabidopsis thaliana GN=At4g28260 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.195e-9
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = -1
Query:  257 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKE-----IAEEKVEPIKMLHFYRAD 430
            LSQ +R ++ + + R  W+KNPE L+NCS GFHFP Q++E     + EE+V+ +K++ FYR +
Sbjct:  453 LSQTWRFQVKVSEGRKAWVKNPERLKNCSTGFHFPQQAEETEQIPVQEERVQMMKLVRFYRVE 515          
BLAST of GR400064 vs. TrEMBL
Match: D7MDL4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491947 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.561e-9
Identity = 28/63 (44.44%), Postives = 43/63 (68.25%), Query Frame = -1
Query:  257 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKE-----IAEEKVEPIKMLHFYRAD 430
            LSQ +R ++ + + R  W+KNPE L+NCS GFHFP Q+ E     + EE+V+ +K++ FYR +
Sbjct:  454 LSQTWRFQVKVSEGRKAWVKNPEKLKNCSTGFHFPQQADESGQIPVQEERVQMMKLVRFYRVE 516          
BLAST of GR400064 vs. TrEMBL
Match: Q337G3_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g35710 PE=4 SV=2)

HSP 1 Score: 64.3142 bits (155), Expect = 4.541e-9
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = -1
Query:  257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRAD 433
            SLS++FR KL   +    W+K+PE L+NCS G HFP++  E +EE+V P+K + FY AD
Sbjct:  453 SLSEMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQVIPLKSVAFYAAD 511          
BLAST of GR400064 vs. TrEMBL
Match: Q8LNG3_ORYSJ (Putative uncharacterized protein OSJNBa0078O01.8 OS=Oryza sativa subsp. japonica GN=OSJNBa0078O01.8 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.119e-7
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = -1
Query:  257 SQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEEKVEPIKMLHFYRAD 427
            S +FR KL   +    W+K+PE L+NCS G HFP++  E +EE+V P+K + FY AD
Sbjct:  381 SGMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQVIPLKSVAFYAAD 437          
BLAST of GR400064 vs. TrEMBL
Match: B8BHQ4_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34206 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.119e-7
Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = -1
Query:  257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEE-KVEPIKMLHFYRAD 433
            SLS++FR KL   +    W+K+PE L+NCS G HFP++  E +EE +V P+K + FY AD
Sbjct:  453 SLSEMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQEVIPLKSVAFYAAD 512          
BLAST of GR400064 vs. TrEMBL
Match: A2Z917_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34208 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.119e-7
Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = -1
Query:  257 SLSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKEIAEE-KVEPIKMLHFYRAD 433
            S+SQ+FR KL   +    W+K+PE L+NCS G HFP++  E +EE +V P+K + FY AD
Sbjct:   23 SVSQMFRYKLKAIEAHKAWMKSPEVLENCSTGLHFPAEQIENSEEQEVIPLKSVAFYAAD 82          
BLAST of GR400064 vs. TAIR peptide
Match: AT4G28260.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:14005048-14006762 FORWARD LENGTH=516)

HSP 1 Score: 66.2402 bits (160), Expect = 8.185e-12
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = -1
Query:  257 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKE-----IAEEKVEPIKMLHFYRAD 430
            LSQ +R ++ + + R  W+KNPE L+NCS GFHFP Q++E     + EE+V+ +K++ FYR +
Sbjct:  453 LSQTWRFQVKVSEGRKAWVKNPERLKNCSTGFHFPQQAEETEQIPVQEERVQMMKLVRFYRVE 515          
BLAST of GR400064 vs. TAIR peptide
Match: AT4G28260.1 (| Symbols: | unknown protein; Has 50 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:14005048-14006762 FORWARD LENGTH=516)

HSP 1 Score: 66.2402 bits (160), Expect = 8.185e-12
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = -1
Query:  257 LSQIFRLKLMIGQKRNQWIKNPEDLQNCSIGFHFPSQSKE-----IAEEKVEPIKMLHFYRAD 430
            LSQ +R ++ + + R  W+KNPE L+NCS GFHFP Q++E     + EE+V+ +K++ FYR +
Sbjct:  453 LSQTWRFQVKVSEGRKAWVKNPERLKNCSTGFHFPQQAEETEQIPVQEERVQMMKLVRFYRVE 515          
The following BLAST results are available for this feature:
BLAST of GR400064 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9RW13_RICCO2.749e-1457.63Putative uncharacterized protein OS=Ricinus commun... [more]
D7SRY9_VITVI3.715e-1149.15Whole genome shotgun sequence of line PN40024, sca... [more]
C5WWG6_SORBI5.365e-1050.85Putative uncharacterized protein Sb01g018020 OS=So... [more]
B6SWY4_MAIZE5.365e-1052.54Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q9M0I1_ARATH1.195e-944.44Putative uncharacterized protein AT4g28260 OS=Arab... [more]
D7MDL4_ARALY1.561e-944.44Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q337G3_ORYSJ4.541e-949.15Expressed protein OS=Oryza sativa subsp. japonica ... [more]
Q8LNG3_ORYSJ1.119e-747.37Putative uncharacterized protein OSJNBa0078O01.8 O... [more]
B8BHQ4_ORYSI1.119e-748.33Putative uncharacterized protein OS=Oryza sativa s... [more]
A2Z917_ORYSI1.119e-748.33Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR400064 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G28260.28.185e-1244.44| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT4G28260.18.185e-1244.44| Symbols: | unknown protein; Has 50 Blast hits t... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR400064 ID=GR400064; Name=GR400064; organism=Cicer arietinum; type=EST; length=445bp
GAGTGAGCAACAATGCAACTTTAAAACGATATTTGATCTTCCTTTACCAT
GTACACATATGTCATAAGAACATGTATACACAATGTTAAATCTGGAGAGT
GGAGACTGTCTACGAGGTTATACAACTCAAGTTTTTCAACCTAAATTTTT
ACCTAAAAATCTACATAGTTCTTGAAAATGCAAAGCCATACTCAGATATA
CAACTGTCTACAAACTAAAATGTAACATTCGCAGAATTCGGCCCCAAACT
CTGATCATCAGCGCGATAGAAATGCAACATTTTTATGGGCTCCACTTTTT
CCTCAGCTATCTCTTTGGATTGCGAAGGAAAATGAAACCCAATTGAGCAA
TTCTGTAAATCTTCAGGATTCTTGATCCATTGGTTTCGTTTTTGACCTAT
CATTAATTTCAATCTGAAGATCTGGGACAGAGAACAAAATTGTGG
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