GR406259

EST Overview


Name	GR406259
Unique Name	GR406259
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	644

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR406259 vs. SwissProt
Match: HERC2_HUMAN (E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.377e-9
Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = -1

Query:  261 ALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRE 611
            ALT DGKV SW           S  +   P L+EA+  +R+  I+CG S SAA+T  G+LY WG     +LG  G    Q  P  V  L+       H+V+ +A G+  A  LAL +
Sbjct: 3061 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLL------GHRVIQVACGSRDAQTLALTD 3170

HSP 2 Score: 58.9214 bits (141), Expect = 2.597e-8
Identity = 38/122 (31.15%), Postives = 58/122 (47.54%), Query Frame = -1

Query:  261 DITPLALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRE 626
            D   LA+T++G+V SW          G  +  K P L+E +    V+ + CG   S A+T  G++Y WG   + +LG             V +    +GL   KV+ +A G++H  CLAL E
Sbjct:  614 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLG-------HGTEEHVRYPKLLEGLQGKKVIDVAAGSTH--CLALTE 726

HSP 3 Score: 55.0694 bits (131), Expect = 3.751e-7
Identity = 40/129 (31.01%), Postives = 57/129 (44.19%), Query Frame = -1

Query:  246 TEDITPLALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRESC*LY 632
            + D   LALTD+G V SW          G  E   +P  +E +  + V  I CG   S A+T  G ++ WG     +LG           V V      +GL   K++ +A GA H  CLA+ +S  +Y
Sbjct: 3160 SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-------HGSDVHVRKPQVVEGLRGKKIVHVAVGALH--CLAVTDSGQVY 3279

HSP 4 Score: 54.299 bits (129), Expect = 6.398e-7
Identity = 34/117 (29.06%), Postives = 50/117 (42.74%), Query Frame = -1

Query:  276 DITPLALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMC 626
            D   L LTDD  V SW          G  +  K+P  ++++    V+ + CG   S A+T  G +Y WG     +LG             V    +  GL   KV++IA G+ H +C
Sbjct: 4154 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-------HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

[Close]

BLAST of GR406259 vs. SwissProt
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3)

HSP 1 Score: 59.3066 bits (142), Expect = 1.989e-8
Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = -1

Query:  261 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRE 614
            LALT DGKV SW          G+  +   P LVEA+  +++  ++CG S SAA++ +G+LY WG     +LG  G    Q  P  V        L   +V+ +A G+  A  LAL E
Sbjct: 3086 LALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG-HGDNTTQLKPKLVT------ALAGRRVVQVACGSRDAQTLALTE 3196

HSP 2 Score: 56.6102 bits (135), Expect = 1.289e-7
Identity = 41/131 (31.30%), Postives = 61/131 (46.56%), Query Frame = -1

Query:  234 DITPLALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRESC*LYKLTW 626
            D   L +TDD  V SW          G  +  KLP  +E++A   V+ + CG   S A+T  G +Y WG     +LG   +  ++  P +V        L   K++SIA G+ H  C+A  +S  +Y  TW
Sbjct: 4251 DAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR-PKKV------AALQGKKIISIATGSLH--CVACSDSGEVY--TW 4370

HSP 3 Score: 55.8398 bits (133), Expect = 2.199e-7
Identity = 40/130 (30.77%), Postives = 61/130 (46.92%), Query Frame = -1

Query:  246 TEDITPLALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAI-QPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRESC*LY 632
            + D   LALT+DG V SW          G  E    P  +E ++   V+ I CG   S A+T  G+++ WG     +LG  G   + +P P+         GL   +V+ +A GA H  CLA+ ++  +Y
Sbjct: 3186 SRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPI--------GGLRGRRVIHVAVGALH--CLAVTDAGQVY 3305

[Close]

BLAST of GR406259 vs. SwissProt
Match: HERC2_MOUSE (E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 5.786e-8
Identity = 38/122 (31.15%), Postives = 57/122 (46.72%), Query Frame = -1

Query:  261 DITPLALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRE 626
            D   LA+T++G+V SW          G  +  K P L+E +    VI + CG   S A+T  G++Y WG   + +LG             V +    +GL   KV+ +A G++H  CL L E
Sbjct:  615 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLG-------HGTEEHVRYPKLLEGLQGKKVIDVAAGSTH--CLVLTE 727

HSP 2 Score: 55.8398 bits (133), Expect = 2.199e-7
Identity = 40/117 (34.19%), Postives = 56/117 (47.86%), Query Frame = -1

Query:  261 ALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRE 611
            ALT DGKV SW           S  +   P L++A+  +R+  I+ G S SA +T  G+LY WG     +LG  G    Q  P  V  L+       H+V+ +A G+  A  LAL +
Sbjct: 3062 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLG-HGDNTTQLKPKMVKVLL------GHRVIQVACGSRDAQTLALTD 3171

HSP 3 Score: 55.0694 bits (131), Expect = 3.751e-7
Identity = 40/129 (31.01%), Postives = 57/129 (44.19%), Query Frame = -1

Query:  246 TEDITPLALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRESC*LY 632
            + D   LALTD+G V SW          G  E   +P  +E +  + V  I CG   S A+T  G ++ WG     +LG           V V      +GL   K++ +A GA H  CLA+ +S  +Y
Sbjct: 3161 SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG-------HGSDVHVRKPQVVEGLRGKKIVHVAVGALH--CLAVTDSGQVY 3280

HSP 4 Score: 54.299 bits (129), Expect = 6.398e-7
Identity = 34/117 (29.06%), Postives = 50/117 (42.74%), Query Frame = -1

Query:  276 DITPLALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMC 626
            D   L LTDD  V SW          G  +  K+P  ++++    V+ + CG   S A+T  G +Y WG     +LG             V    +  GL   KV++IA G+ H +C
Sbjct: 4156 DAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG-------HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

[Close]

BLAST of GR406259 vs. SwissProt
Match: RCBT2_RAT (RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus GN=Rcbtb2 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.684e-7
Identity = 39/115 (33.91%), Postives = 56/115 (48.70%), Query Frame = -1

Query:  273 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIF-ISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCL 614
            L LT DG+V +W          GS  ++ +P  V      +V+  I+CG   S AV D G++YVWG   + QLG+ G    QP P  V  L    G+   +V  +A G +H + L
Sbjct:  165 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGL-GSSGNQPTPCRVAAL---QGI---RVQRVACGYAHTLVL 272

[Close]

BLAST of GR406259 vs. SwissProt
Match: RCBT2_MOUSE (RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.684e-7
Identity = 39/115 (33.91%), Postives = 56/115 (48.70%), Query Frame = -1

Query:  273 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIF-ISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCL 614
            L LT DG+V +W          GS  ++ +P  V      +V+  I+CG   S AV D G++YVWG   + QLG+ G    QP P  V  L    G+   +V  +A G +H + L
Sbjct:  165 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGL-GSSGNQPTPCRVAAL---QGI---RVQRVACGYAHTLVL 272

[Close]

BLAST of GR406259 vs. SwissProt
Match: HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 2.199e-7
Identity = 37/129 (28.68%), Postives = 63/129 (48.84%), Query Frame = -1

Query:  228 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRESC*LYKLTWRF 614
            +ALT+ G+V SW          G+ + ++ P  +EA+  E V+ +SCG   SA VT  GKL+ +GN    +LG+ G  + +  P  V        L  +++  +A G +H + ++   S     + W F
Sbjct: 4095 MALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGL-GNTSNKKLPERVT------ALEGYQIGQVACGLNHTLAVSADGS-----MVWAF 4211

[Close]

BLAST of GR406259 vs. SwissProt
Match: RCC2_MOUSE (Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 3.751e-7
Identity = 25/89 (28.09%), Postives = 46/89 (51.69%), Query Frame = -1

Query:  348 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNF 614
            L +T +GK+ SW          G  +  + P L+EA++HE ++  +CG + + A+TD G ++ +G     QLG+       P P ++ +
Sbjct:  161 LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMY 249

[Close]

BLAST of GR406259 vs. SwissProt
Match: HERC5_HUMAN (E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 3.751e-7
Identity = 36/113 (31.86%), Postives = 55/113 (48.67%), Query Frame = -1

Query:  279 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLP-AIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAM 614
            +AL+  G + SW          G  ESK  P+L+E + +++V F++CGGS SA +T  G L+ +G     QLG       ++PC V          L  ++V  IA G  H +
Sbjct:  204 MALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVA--------ELVGYRVTQIACGRWHTL 308

[Close]

BLAST of GR406259 vs. TrEMBL
Match: A2Q2N3_MEDTR (Regulator of chromosome condensation/beta-lactamase-inhibitor protein II OS=Medicago truncatula GN=MtrDRAFT_AC151521g55v2 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.043e-49
Identity = 99/120 (82.50%), Postives = 107/120 (89.17%), Query Frame = -1

Query:  255 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRESC 614
            LALTDDGKVLSW          GSVE++K+PTLVEAIAHE +I+ISCGG+SSAAVTD+GKLY+WGNASDSQLGVPGLPAIQP PVEVNFLMEDDGLG HKVLSIANGASHAMCLALRESC
Sbjct:  325 LALTDDGKVLSWGHGGQGQLGHGSVENQKIPTLVEAIAHEHIIYISCGGASSAAVTDEGKLYMWGNASDSQLGVPGLPAIQPYPVEVNFLMEDDGLGSHKVLSIANGASHAMCLALRESC 444

[Close]

BLAST of GR406259 vs. TrEMBL
Match: B9R8I6_RICCO (Guanine nucleotide exchange factor P532, putative OS=Ricinus communis GN=RCOM_1600140 PE=4 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.107e-42
Identity = 80/119 (67.23%), Postives = 100/119 (84.03%), Query Frame = -1

Query:  258 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRES 614
            LALTD+GKVLSW           S++++K+P +++A+A +RV++I+CGGS+SAA+TD+GKLY+WGNA DSQLGVPGLP +QPCPVEV FLMEDDGLGPHKVLS+A GASHAMCL LR S
Sbjct:  331 LALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGASHAMCLVLRTS 449

[Close]

BLAST of GR406259 vs. TrEMBL
Match: D7TUH1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_17.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00015901001 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.366e-41
Identity = 82/120 (68.33%), Postives = 94/120 (78.33%), Query Frame = -1

Query:  255 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRESC 614
            LALTDDGKVLSW           S+E++K+PT++EA+A E VI+I+CGGSSSAA+TD GKLY+WGNA DSQLGVPGLP  QP PVEV FLMEDD LGPH VLS+A GASHAMCL  R  C
Sbjct:  210 LALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVLSVAVGASHAMCLVSRSGC 329

[Close]

BLAST of GR406259 vs. TrEMBL
Match: B9N8J1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_746227 PE=4 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.576e-40
Identity = 77/117 (65.81%), Postives = 95/117 (81.20%), Query Frame = -1

Query:  264 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 614
            LALTD+GKVLSW           S++S+K+P +++A+A + VI+I+CGGSSSAA+TDKGKLY+WGNA DSQLG+PGLP +Q CPVEV FLMEDDGLG H VLS++ GASHAMCL LR
Sbjct:  203 LALTDEGKVLSWGFGGHGQLGHSSIQSQKIPAVIDALADQHVIYIACGGSSSAAITDKGKLYMWGNAKDSQLGIPGLPEVQSCPVEVKFLMEDDGLGQHSVLSVSVGASHAMCLVLR 319

[Close]

BLAST of GR406259 vs. TrEMBL
Match: D7MUF0_ARALY (Regulator of chromosome condensation family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496236 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.984e-33
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = -1

Query:  264 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 614
            LALT +GKVLSW           S+ ++K+PT +EA+A ++++FI+CGGSSSAA+TD G+L++WGNA D QLGVPGLP IQ  PVEVNFL E+D   PHKV+S++ GASHA+CL  R
Sbjct:  327 LALTKEGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASHALCLVSR 443

[Close]

BLAST of GR406259 vs. TrEMBL
Match: Q9FJG9_ARATH (Similarity to regulator of chromosome condensation OS=Arabidopsis thaliana GN=At5g60870 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.977e-32
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = -1

Query:  264 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 614
            LALT++GKVLSW           S+ ++K+PT +EA+A ++++FI+ GGSSSAA+TD G+L++WGNA D QLGVPGLP IQ  PVEVNFL E+D   PHKV+SI+ GASHA+CL  R
Sbjct:  327 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 443

[Close]

BLAST of GR406259 vs. TrEMBL
Match: Q56Y67_ARATH (UVB-resistance protein UVR8-like OS=Arabidopsis thaliana GN=At5g60870 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.977e-32
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = -1

Query:  264 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 614
            LALT++GKVLSW           S+ ++K+PT +EA+A ++++FI+ GGSSSAA+TD G+L++WGNA D QLGVPGLP IQ  PVEVNFL E+D   PHKV+SI+ GASHA+CL  R
Sbjct:  158 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 274

[Close]

BLAST of GR406259 vs. TrEMBL
Match: B3LF49_ARATH (At5g60870 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.977e-32
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = -1

Query:  264 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 614
            LALT++GKVLSW           S+ ++K+PT +EA+A ++++FI+ GGSSSAA+TD G+L++WGNA D QLGVPGLP IQ  PVEVNFL E+D   PHKV+SI+ GASHA+CL  R
Sbjct:  258 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 374

[Close]

BLAST of GR406259 vs. TrEMBL
Match: B4FS31_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.729e-31
Identity = 63/115 (54.78%), Postives = 89/115 (77.39%), Query Frame = -1

Query:  273 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDD-GLGPHKVLSIANGASHAMCL 614
            LALTD+GKVLSW           ++++ ++P  ++A++ ER++ I+CGGS+SAA+++KG LY+WGNA D QLG+PGLP +QP PV+V FL +DD GLGP +V+S+A GASHAMCL
Sbjct:  310 LALTDEGKVLSWGHGGHGQLGHPTLQNHRVPLAIKALSDERIVHIACGGSTSAAISEKGDLYMWGNARDCQLGIPGLPEVQPLPVKVIFLRDDDEGLGPSRVISVAIGASHAMCL 424

[Close]

BLAST of GR406259 vs. TrEMBL
Match: C5X8E0_SORBI (Putative uncharacterized protein Sb02g032760 OS=Sorghum bicolor GN=Sb02g032760 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.085e-30
Identity = 62/115 (53.91%), Postives = 89/115 (77.39%), Query Frame = -1

Query:  273 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLME-DDGLGPHKVLSIANGASHAMCL 614
            LALTD+G+VLSW           ++++ ++P  ++A++ ER++ I+CGGS+SAA+++KG LY+WGNA D QLGVPGLP +QP PV+VNFL + D+ LGP +V+S+A GASHAMCL
Sbjct:  310 LALTDEGEVLSWGHGGHGQLGHPTLQNHRIPLAIKALSDERIVHIACGGSTSAAISEKGDLYMWGNARDCQLGVPGLPEVQPLPVKVNFLRDGDEDLGPSRVISVAIGASHAMCL 424

[Close]

BLAST of GR406259 vs. TAIR peptide
Match: AT5G60870.3 (| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr5:24485788-24487257 REVERSE LENGTH=276)

HSP 1 Score: 142.895 bits (359), Expect = 1.402e-34
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = -1

Query:  264 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 614
            LALT++GKVLSW           S+ ++K+PT +EA+A ++++FI+ GGSSSAA+TD G+L++WGNA D QLGVPGLP IQ  PVEVNFL E+D   PHKV+SI+ GASHA+CL  R
Sbjct:  158 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 274

[Close]

BLAST of GR406259 vs. TAIR peptide
Match: AT5G60870.1 (| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr5:24485788-24487771 REVERSE LENGTH=445)

HSP 1 Score: 142.895 bits (359), Expect = 1.402e-34
Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = -1

Query:  264 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 614
            LALT++GKVLSW           S+ ++K+PT +EA+A ++++FI+ GGSSSAA+TD G+L++WGNA D QLGVPGLP IQ  PVEVNFL E+D   PHKV+SI+ GASHA+CL  R
Sbjct:  327 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 443

[Close]

BLAST of GR406259 vs. TAIR peptide
Match: AT5G60870.2 (| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr5:24485788-24487564 REVERSE LENGTH=383)

HSP 1 Score: 135.961 bits (341), Expect = 1.714e-32
Identity = 68/124 (54.84%), Postives = 89/124 (71.77%), Query Frame = -1

Query:  264 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVT-------DKGKLYVWGNASDSQLGVPGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 614
            LALT++GKVLSW           S+ ++K+PT +EA+A ++++FI+ GGSSSAA+T       D G+L++WGNA D QLGVPGLP IQ  PVEVNFL E+D   PHKV+SI+ GASHA+CL  R
Sbjct:  258 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 381

[Close]

BLAST of GR406259 vs. TAIR peptide
Match: AT3G02510.1 (| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr3:522086-524536 REVERSE LENGTH=393)

HSP 1 Score: 56.6102 bits (135), Expect = 1.321e-8
Identity = 33/115 (28.70%), Postives = 59/115 (51.30%), Query Frame = -1

Query:  273 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGV-PGLPAIQPCPVEVNFLMEDDGLGPHKVLSIANGASHAMCL 614
            LAL +DG++L+W          G  +    P  V+ +    ++ I+ GG  S A+TDKG++Y WG     +LG+     + +  P +VN L E+D      ++ ++ G +H++ L
Sbjct:  209 LALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEED------IIQVSCGGTHSVAL 317

[Close]

BLAST of GR406259 vs. TAIR peptide
Match: AT3G02510.2 (| Symbols: | Regulator of chromosome condensation (RCC1) family protein | chr3:522524-524536 REVERSE LENGTH=310)

HSP 1 Score: 52.7582 bits (125), Expect = 1.908e-7
Identity = 30/95 (31.58%), Postives = 49/95 (51.58%), Query Frame = -1

Query:  333 LALTDDGKVLSWXXXXXXXXXXGSVESKKLPTLVEAIAHERVIFISCGGSSSAAVTDKGKLYVWGNASDSQLGV-PGLPAIQPCPVEVNFLMEDD 614
            LAL +DG++L+W          G  +    P  V+ +    ++ I+ GG  S A+TDKG++Y WG     +LG+     + +  P +VN L E+D
Sbjct:  209 LALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEED 303

The following BLAST results are available for this feature:

BLAST of GR406259 vs. SwissProt
BLAST of GR406259 vs. TrEMBL
BLAST of GR406259 vs. TAIR peptide

BLAST of GR406259 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
HERC2_HUMAN	1.377e-9	36.75	E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens ...	[more]
HERC2_DROME	1.989e-8	35.59	Probable E3 ubiquitin-protein ligase HERC2 OS=Dros...	[more]
HERC2_MOUSE	5.786e-8	31.15	E3 ubiquitin-protein ligase HERC2 OS=Mus musculus ...	[more]
RCBT2_RAT	1.684e-7	33.91	RCC1 and BTB domain-containing protein 2 OS=Rattus...	[more]
RCBT2_MOUSE	1.684e-7	33.91	RCC1 and BTB domain-containing protein 2 OS=Mus mu...	[more]
HERC1_HUMAN	2.199e-7	28.68	Probable E3 ubiquitin-protein ligase HERC1 OS=Homo...	[more]
RCC2_MOUSE	3.751e-7	28.09	Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1	[more]
HERC5_HUMAN	3.751e-7	31.86	E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=...	[more]

BLAST of GR406259 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A2Q2N3_MEDTR	1.043e-49	82.50	Regulator of chromosome condensation/beta-lactamas...	[more]
B9R8I6_RICCO	2.107e-42	67.23	Guanine nucleotide exchange factor P532, putative ...	[more]
D7TUH1_VITVI	1.366e-41	68.33	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9N8J1_POPTR	2.576e-40	65.81	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7MUF0_ARALY	3.984e-33	58.12	Regulator of chromosome condensation family protei...	[more]
Q9FJG9_ARATH	1.977e-32	58.12	Similarity to regulator of chromosome condensation...	[more]
Q56Y67_ARATH	1.977e-32	58.12	UVB-resistance protein UVR8-like OS=Arabidopsis th...	[more]
B3LF49_ARATH	1.977e-32	58.12	At5g60870 OS=Arabidopsis thaliana PE=2 SV=1	[more]
B4FS31_MAIZE	3.729e-31	54.78	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
C5X8E0_SORBI	1.085e-30	53.91	Putative uncharacterized protein Sb02g032760 OS=So...	[more]

BLAST of GR406259 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G60870.3	1.402e-34	58.12	\| Symbols: \| Regulator of chromosome condensation...	[more]
AT5G60870.1	1.402e-34	58.12	\| Symbols: \| Regulator of chromosome condensation...	[more]
AT5G60870.2	1.714e-32	54.84	\| Symbols: \| Regulator of chromosome condensation...	[more]
AT3G02510.1	1.321e-8	28.70	\| Symbols: \| Regulator of chromosome condensation...	[more]
AT3G02510.2	1.908e-7	31.58	\| Symbols: \| Regulator of chromosome condensation...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 16..65 score: 5.9e-13coord: 68..124 score: 1.7
IPR000408	Regulator of chromosome condensation, RCC1	PROFILE	PS50012	RCC1_3	coord: 17..68 score: 15.388coord: 69..127 score: 12
IPR009091	Regulator of chromosome condensation/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30	no description	coord: 11..124 score: 2.2
IPR009091	Regulator of chromosome condensation/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 11..124 score: 1.5
None	No IPR available	PANTHER	PTHR22870	REGULATOR OF CHROMOSOME CONDENSATION	coord: 11..124 score: 3.8
None	No IPR available	PANTHER	PTHR22870:SF21	GUANINE NUCLEOTIDE EXCHANGE FACTOR P532	coord: 11..124 score: 3.8
None	No IPR available	SEG	seg	seg	coord: 23..33 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR406259 ID=GR406259; Name=GR406259; organism=Cicer arietinum; type=EST; length=644bp
GCCAGACATTTAGCTAGAGATTCTTCAAATGTGAGTTGATCTTCATGTTA
CATTAGCTATAAAGTTGTCAAAACTAAATTGAGTTTGAGATCTGAATCAA
TTGTAACAATCATCTATTCATTGAGACATTCTATTCCACAAGAAAAAAAG
CTTCTTCTGCATTTCACCTAGGAAACTTGTTCAAGATCAACTGTATCCAT
GCCAACAGGTCATTATTGTCAAAGAAAAAATCTCCATGTCAGCTTATATA
ATCAACAACTTTCCCTCAAAGCCAAACACATGGCATGTGATGCGCCATTC
GCAATTGACAAAACCTTGTGTGGTCCCAATCCATCGTCTTCCATTAAAAA
ATTGACTTCAACAGGGCATGGTTGTATTGCTGGTAGCCCAGGAACTCCCA
ATTGAGAATCACTGGCATTTCCCCACACATATAACTTCCCTTTATCTGTC
ACAGCTGCTGATGAAGAACCCCCACAAGAAATAAATATAACACGCTCATG
AGCTATAGCCTCAACTAATGTTGGTAGCTTCTTGCTCTCAACAGATCCAT
GACCTAACTGACCTTGTCCACCATGTCCCCATGAAAGCACTTTGCCATCA
TCCGTTAATGCAAGGGGAGTGATATCCTCCGTTAGCCATTTGAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR000408	Reg_chr_condens
IPR009091	RCC1/BLIP-II

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