GR407803

EST Overview


Name	GR407803
Unique Name	GR407803
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	503

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR407803 vs. SwissProt
Match: DRIP2_ARATH (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.671e-37
Identity = 69/107 (64.49%), Postives = 86/107 (80.37%), Query Frame = -3

Query:    1 MSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLPA 321
            M  + V KVKRET+  CMTCPLC+ L + ATTI EC HTFCRKCIY+KIT++++E CPVC+IDLG  PLEKLRPDH  QD+R+K+FP+K KK + PEVV +S+ LPA
Sbjct:    1 MEGDMVAKVKRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGTPLEKLRPDHILQDLRAKLFPLKRKKERAPEVV-SSISLPA 106

[Close]

BLAST of GR407803 vs. SwissProt
Match: DRIP1_ARATH (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.372e-33
Identity = 58/95 (61.05%), Postives = 80/95 (84.21%), Query Frame = -3

Query:   22 VVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVA 306
            ++KVK+ET+  C++C +C+N+ + ATTI EC HTFCRKCIY+KIT++++E CPVCNIDLG  PLEKLRPDH+ QD+R+KIF +K +KVK P +V+
Sbjct:    2 MIKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGSTPLEKLRPDHNLQDLRAKIFALKRRKVKAPGIVS 96

[Close]

BLAST of GR407803 vs. SwissProt
Match: DRIPH_ARATH (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana GN=At3g23060 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.858e-22
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = -3

Query:   13 VVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKE--PEVVAASV 306
            + KV  + +  C+ CP+C N FK ATTI EC HTFCR CI +K  +E +  CPVCN++LG  PLEKLR D + QD++ KI+    + +K+  P+ VAASV
Sbjct:    2 LTKVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKLRSDCTWQDLKLKIYRAMMESLKKAGPKTVAASV 101

[Close]

BLAST of GR407803 vs. SwissProt
Match: PCGF1_XENTR (Polycomb group RING finger protein 1 OS=Xenopus tropicalis GN=pcgf1 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 4.748e-10
Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = -3

Query:   61 LWKSITMSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDL-GCVPLEKLRPDHSKQDVRSKIFP 339
            ++K   + + +VVKVK + +   + C LC   F  ATTI EC HTFC+ CI   +  +  + CP+CNI +    PL  L+ D   QD+  K+ P
Sbjct:   20 VYKMDPLRNEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYL--QTSKYCPLCNIKIHETQPLLNLKLDRVMQDIVYKLVP 111

[Close]

BLAST of GR407803 vs. SwissProt
Match: PCGF1_XENLA (Polycomb group RING finger protein 1 OS=Xenopus laevis GN=pcgf1 PE=2 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 4.748e-10
Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = -3

Query:   61 LWKSITMSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDL-GCVPLEKLRPDHSKQDVRSKIFP 339
            ++K   + + +VVKVK + +   + C LC   F  ATTI EC HTFC+ CI   +  +  + CP+CNI +    PL  L+ D   QD+  K+ P
Sbjct:   20 VYKMDPLRNEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYL--QTSKYCPLCNIKIHETQPLLNLKLDRVMQDIVYKLVP 111

[Close]

BLAST of GR407803 vs. SwissProt
Match: PCGF1_DANRE (Polycomb group RING finger protein 1 OS=Danio rerio GN=pcgf1 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.804e-9
Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = -3

Query:   37 LWKSITMSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDL-GCVPLEKLRPDHSKQDVRSKIFP----IKGKKVKE 339
            ++K   + + + VK+K + +   + C LC   F  ATTI EC HTFC+ CI   +  +  + CP+CNI +    PL  L+ D   QD+  K+ P     + K++KE
Sbjct:   20 VYKLDPLRNEEEVKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYL--QTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQESEDKRIKE 123

[Close]

BLAST of GR407803 vs. SwissProt
Match: PCGF1_RAT (Polycomb group RING finger protein 1 (Fragment) OS=Rattus norvegicus GN=Pcgf1 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.019e-9
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = -3

Query:   61 LWKSITMSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDL-GCVPLEKLRPDHSKQDVRSKIFP 339
            ++K   + + + V+VK + +   + C LC   F  ATTI EC HTFC+ CI   +  +  + CP+CNI +    PL  L+ D   QD+  K+ P
Sbjct:   10 VYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 101

[Close]

BLAST of GR407803 vs. SwissProt
Match: PCGF1_MOUSE (Polycomb group RING finger protein 1 OS=Mus musculus GN=Pcgf1 PE=2 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 4.019e-9
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = -3

Query:   61 LWKSITMSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDL-GCVPLEKLRPDHSKQDVRSKIFP 339
            ++K   + + + V+VK + +   + C LC   F  ATTI EC HTFC+ CI   +  +  + CP+CNI +    PL  L+ D   QD+  K+ P
Sbjct:   22 VYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 113

[Close]

BLAST of GR407803 vs. SwissProt
Match: PCGF1_HUMAN (Polycomb group RING finger protein 1 OS=Homo sapiens GN=PCGF1 PE=1 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 4.019e-9
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = -3

Query:   61 LWKSITMSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDL-GCVPLEKLRPDHSKQDVRSKIFP 339
            ++K   + + + V+VK + +   + C LC   F  ATTI EC HTFC+ CI   +  +  + CP+CNI +    PL  L+ D   QD+  K+ P
Sbjct:   22 VYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 113

[Close]

BLAST of GR407803 vs. SwissProt
Match: PCGF3_XENTR (Polycomb group RING finger protein 3 OS=Xenopus tropicalis GN=pcgf3 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.169e-8
Identity = 31/81 (38.27%), Postives = 43/81 (53.09%), Query Frame = -3

Query:   61 KVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDL-GCVPLEKLRPDHSKQDVRSKIFP 300
            K+K   I   +TC LCN     ATT+ EC HTFCR C+   +  E+   CP C I +    PL+ +  D + QD+  K+ P
Sbjct:    5 KIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQSHPLQYIGHDRTMQDIVYKLVP 83

[Close]

BLAST of GR407803 vs. TrEMBL
Match: D7SQL7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_141.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000748001 PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.059e-42
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = -3

Query:   25 SNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVV 315
            SNQVVKV+RETIA CMTCPLCN L + ATTI EC HTFCRKCIY+KI+DE+LECCP+CN DLGCVPLEKLRPDH+ QDVR+KIFP K +KVK PEVV
Sbjct:    2 SNQVVKVRRETIAACMTCPLCNKLLRDATTISECLHTFCRKCIYNKISDEELECCPICNTDLGCVPLEKLRPDHNLQDVRAKIFPFKRRKVKAPEVV 98

[Close]

BLAST of GR407803 vs. TrEMBL
Match: B9S4T4_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0992240 PE=4 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.306e-40
Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = -3

Query:    4 SNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLP 315
            +NQVVKVKR+TIA CMTCPLC+ L K ATTI EC HTFCRKCIY KI+DE +ECCP+CNIDLGCVPLEKLRPDH+ QDVR+KIFP K +KV+ PE V +SV LP
Sbjct:    2 ANQVVKVKRDTIAACMTCPLCDMLLKDATTISECLHTFCRKCIYKKISDEGVECCPICNIDLGCVPLEKLRPDHNLQDVRAKIFPFKRRKVEAPE-VTSSVILP 104

[Close]

BLAST of GR407803 vs. TrEMBL
Match: D7TXF2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_81.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036276001 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.217e-39
Identity = 71/104 (68.27%), Postives = 89/104 (85.58%), Query Frame = -3

Query:    4 SNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLP 315
            ++QVVKV+RETIA CMTCPLCN L K+ATTI  C HTFCRKCIY+K++DE+++CCPVCNIDLGCVP++KLRPDH+ QD+R+KIFP K +K   PEV+   +PLP
Sbjct:    2 TSQVVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLGCVPVDKLRPDHNLQDIRAKIFPFKRRKTSVPEVM-PPIPLP 104

[Close]

BLAST of GR407803 vs. TrEMBL
Match: A5AFM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006024 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.217e-39
Identity = 70/104 (67.31%), Postives = 90/104 (86.54%), Query Frame = -3

Query:    4 SNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLP 315
            ++QVVKV+RETIA CMTCPLCN L K+ATTI  C HTFCRKCIY+K++DE+++CCPVCNIDLGCVP++KLRPDH+ QD+R+KIFP K +K+  P+V+   +PLP
Sbjct:    2 TSQVVKVRRETIAACMTCPLCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLGCVPVDKLRPDHNLQDIRAKIFPFKRRKISVPQVM-PPIPLP 104

[Close]

BLAST of GR407803 vs. TrEMBL
Match: B9MZC8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_810467 PE=4 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.222e-38
Identity = 68/105 (64.76%), Postives = 89/105 (84.76%), Query Frame = -3

Query:    1 SNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLPA 315
            S Q+VKVKRE +  CMTCPLCN L K+ATTIF C HTFCRKCIY+K++DE+++CCPVCN++LGC+P++KLR DH+ QD+R+KIFP K +KVK PE++  S+ LPA
Sbjct:    2 SGQIVKVKREILEACMTCPLCNKLLKEATTIFSCLHTFCRKCIYEKLSDEEVDCCPVCNMNLGCLPVDKLRADHNLQDIRAKIFPFKRRKVKAPEII-PSIALPA 105

[Close]

BLAST of GR407803 vs. TrEMBL
Match: B9H8H8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_761292 PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.066e-38
Identity = 73/103 (70.87%), Postives = 86/103 (83.50%), Query Frame = -3

Query:    4 NQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLP 312
            ++VVKV+RETI  CMTCPLCN L + ATTI EC HTFCRKCIY +I+DE L+ CP+CNI+LGC+PLEKLRPDH+ QDVRSKIFP K +KV+ PEVV  SV LP
Sbjct:    8 HRVVKVRRETIEACMTCPLCNKLLRDATTISECLHTFCRKCIYQRISDEGLDSCPICNINLGCIPLEKLRPDHNLQDVRSKIFPYKRRKVEAPEVV-ESVTLP 109

[Close]

BLAST of GR407803 vs. TrEMBL
Match: B9SZ64_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0484420 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.765e-37
Identity = 69/105 (65.71%), Postives = 88/105 (83.81%), Query Frame = -3

Query:    1 SNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLPA 315
            + QVVKVKRE I  CMTCPLCN L + ATTI  C HTFCRKCIY+K++DE+ +CCPVC+IDLGC+P+EKLRPDH+ QD+R+KIFP+K +K++ PEV+  S+ LPA
Sbjct:    2 AGQVVKVKREIIEACMTCPLCNKLLRDATTISLCLHTFCRKCIYEKLSDEEGDCCPVCDIDLGCLPVEKLRPDHNLQDIRAKIFPLKRRKIRAPEVM-PSIALPA 105

[Close]

BLAST of GR407803 vs. TrEMBL
Match: B9GS64_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1071260 PE=4 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.932e-37
Identity = 74/103 (71.84%), Postives = 86/103 (83.50%), Query Frame = -3

Query:    4 NQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLP 312
            +QVVKV+RETIA CMTC LCN L + ATTI EC HTFCRKCIY +I++E L+ CP+CNI+LGCVPLEKLRPDH+ QDVRSKIFP K +KV+ PE VA SV LP
Sbjct:   10 HQVVKVRRETIAACMTCLLCNKLLRDATTISECLHTFCRKCIYRRISNEGLDSCPICNINLGCVPLEKLRPDHNLQDVRSKIFPYKKRKVEAPE-VAESVALP 111

[Close]

BLAST of GR407803 vs. TrEMBL
Match: B9I5G3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571049 PE=4 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.759e-37
Identity = 65/105 (61.90%), Postives = 87/105 (82.86%), Query Frame = -3

Query:    1 SNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLPA 315
            + Q VKV+R+ +  CMTCPLCN L K+ATTI  C H+FCRKCIY+K++DE+++CCPVCNIDLGC+P+EKLRPDH+ QD+R+K+FP K +KV  PE++  S+ LPA
Sbjct:    2 AGQTVKVQRQVLEACMTCPLCNKLLKEATTISLCLHSFCRKCIYEKLSDEEVDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKVFPFKRRKVNAPEIM-PSIALPA 105

[Close]

BLAST of GR407803 vs. TrEMBL
Match: D7LC67_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902047 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.678e-36
Identity = 68/107 (63.55%), Postives = 85/107 (79.44%), Query Frame = -3

Query:    1 MSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLPA 321
            M  + V KVKRET+  CMTC LC  L + ATTI EC HTFCRKCIY+KIT++++ECCPVC+IDLG  PLEKLRPDH  QD+R+K+FP+K K+ + PEVV +S+ LPA
Sbjct:    1 MEGDMVAKVKRETVVACMTCSLCEKLLRDATTISECLHTFCRKCIYEKITEDEIECCPVCDIDLGGTPLEKLRPDHILQDLRAKLFPLKRKRERAPEVV-SSITLPA 106

[Close]

BLAST of GR407803 vs. TAIR peptide
Match: AT2G30580.1 (| Symbols: DRIP2 | DREB2A-interacting protein 2 | chr2:13026444-13030363 FORWARD LENGTH=420)

HSP 1 Score: 154.451 bits (389), Expect = 2.948e-38
Identity = 69/107 (64.49%), Postives = 86/107 (80.37%), Query Frame = -3

Query:    1 MSSNQVVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVAASVPLPA 321
            M  + V KVKRET+  CMTCPLC+ L + ATTI EC HTFCRKCIY+KIT++++E CPVC+IDLG  PLEKLRPDH  QD+R+K+FP+K KK + PEVV +S+ LPA
Sbjct:    1 MEGDMVAKVKRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGTPLEKLRPDHILQDLRAKLFPLKRKKERAPEVV-SSISLPA 106

[Close]

BLAST of GR407803 vs. TAIR peptide
Match: AT1G06770.1 (| Symbols: DRIP1 | DREB2A-interacting protein 1 | chr1:2079222-2081707 REVERSE LENGTH=421)

HSP 1 Score: 142.124 bits (357), Expect = 1.514e-34
Identity = 58/95 (61.05%), Postives = 80/95 (84.21%), Query Frame = -3

Query:   22 VVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKEPEVVA 306
            ++KVK+ET+  C++C +C+N+ + ATTI EC HTFCRKCIY+KIT++++E CPVCNIDLG  PLEKLRPDH+ QD+R+KIF +K +KVK P +V+
Sbjct:    2 MIKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGSTPLEKLRPDHNLQDLRAKIFALKRRKVKAPGIVS 96

[Close]

BLAST of GR407803 vs. TAIR peptide
Match: AT3G23060.1 (| Symbols: | RING/U-box superfamily protein | chr3:8200868-8203116 FORWARD LENGTH=480)

HSP 1 Score: 105.145 bits (261), Expect = 2.051e-23
Identity = 49/100 (49.00%), Postives = 67/100 (67.00%), Query Frame = -3

Query:   13 VVKVKRETIATCMTCPLCNNLFKQATTIFECFHTFCRKCIYDKITDEDLECCPVCNIDLGCVPLEKLRPDHSKQDVRSKIFPIKGKKVKE--PEVVAASV 306
            + KV  + +  C+ CP+C N FK ATTI EC HTFCR CI +K  +E +  CPVCN++LG  PLEKLR D + QD++ KI+    + +K+  P+ VAASV
Sbjct:    2 LTKVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVFPLEKLRSDCTWQDLKLKIYRAMMESLKKAGPKTVAASV 101

The following BLAST results are available for this feature:

BLAST of GR407803 vs. SwissProt
BLAST of GR407803 vs. TrEMBL
BLAST of GR407803 vs. TAIR peptide

BLAST of GR407803 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
DRIP2_ARATH	2.671e-37	64.49	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis t...	[more]
DRIP1_ARATH	1.372e-33	61.05	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis t...	[more]
DRIPH_ARATH	1.858e-22	49.00	Probable E3 ubiquitin protein ligase DRIPH OS=Arab...	[more]
PCGF1_XENTR	4.748e-10	37.23	Polycomb group RING finger protein 1 OS=Xenopus tr...	[more]
PCGF1_XENLA	4.748e-10	37.23	Polycomb group RING finger protein 1 OS=Xenopus la...	[more]
PCGF1_DANRE	1.804e-9	33.96	Polycomb group RING finger protein 1 OS=Danio reri...	[more]
PCGF1_RAT	4.019e-9	35.11	Polycomb group RING finger protein 1 (Fragment) OS...	[more]
PCGF1_MOUSE	4.019e-9	35.11	Polycomb group RING finger protein 1 OS=Mus muscul...	[more]
PCGF1_HUMAN	4.019e-9	35.11	Polycomb group RING finger protein 1 OS=Homo sapie...	[more]
PCGF3_XENTR	1.169e-8	38.27	Polycomb group RING finger protein 3 OS=Xenopus tr...	[more]

BLAST of GR407803 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7SQL7_VITVI	4.059e-42	79.38	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9S4T4_RICCO	1.306e-40	75.00	Ring finger protein, putative OS=Ricinus communis ...	[more]
D7TXF2_VITVI	3.217e-39	68.27	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5AFM2_VITVI	3.217e-39	67.31	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9MZC8_POPTR	1.222e-38	64.76	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9H8H8_POPTR	6.066e-38	70.87	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SZ64_RICCO	1.765e-37	65.71	Ring finger protein, putative OS=Ricinus communis ...	[more]
B9GS64_POPTR	3.932e-37	71.84	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9I5G3_POPTR	8.759e-37	61.90	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7LC67_ARALY	5.678e-36	63.55	Zinc finger family protein OS=Arabidopsis lyrata s...	[more]

BLAST of GR407803 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G30580.1	2.948e-38	64.49	\| Symbols: DRIP2 \| DREB2A-interacting protein 2 \| ...	[more]
AT1G06770.1	1.514e-34	61.05	\| Symbols: DRIP1 \| DREB2A-interacting protein 1 \| ...	[more]
AT3G23060.1	2.051e-23	49.00	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 12..36 score: NAcoord: 54..69 score
None	No IPR available	PANTHER	PTHR10825	RING FINGER PROTEIN	coord: 25..115 score: 1.1
None	No IPR available	PANTHER	PTHR10825:SF3	RING FINGER PROTEIN	coord: 25..115 score: 1.1
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 21..93 score: 1.5
IPR001841	Zinc finger, RING-type	SMART	SM00184	no description	coord: 28..68 score: 0.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 28..69 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 15..94 score: 2.7
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 44..53 score
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 28..68 score: 0.0

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR407803 ID=GR407803; Name=GR407803; organism=Cicer arietinum; type=EST; length=503bp
AGCTGGCAATGGTACTGAGGCGGCAACAACTTCAGGTTCTTTAACCTTTT
TTCCCTTTATTGGGAAAATTTTGGACCTTACATCTTGCTTACTGTGGTCA
GGCCTTAGTTTCTCAAGAGGAACACAACCCAAATCAATGTTGCATACTGG
ACAGCATTCCAAATCTTCATCTGTAATTTTGTCATAAATGCACTTCCTGC
AAAACGTGTGAAAACATTCAAATATAGTTGTAGCTTGTTTGAACAAGTTG
TTGCAAAGTGGGCAAGTCATGCATGTTGCAATCGTTTCTCTCTTTACTTT
CACAACTTGATTCGACGACATGGTTATTGATTTCCACAATCTCACTCACT
CACAACGTATTCAGTTACTGCATGCTGTCGCTACCATTACGCGAAAACCA
TTCAATTTTACGTCCATTATCGTTGGAATCATCACCTGAGGGATCGGAAA
AAATGGTTTGAAAAAGGGTGGTTGAAGATTTAAGGGGGGGTGTTAATAAA
AAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS
IPR018957	Znf_C3HC4_RING-type

Search form