FE671968

EST Overview
NameFE671968
Unique NameFE671968
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length317
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of FE671968 vs. TrEMBL
Match: Q52ZI3_PEA (Early flowering 4 OS=Pisum sativum GN=ELF4 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.204e-23
Identity = 61/81 (75.31%), Postives = 67/81 (82.72%), Query Frame = 2
Query:   86 PSSAADSGMEDTSNHHHGSKKNKLRRRP---PTTGD-SDLEEAEDGDPEVWATKNKSFRQVQSVLDRNRAIIQQVRENQQS 316
            PSSAA S MED++  HH SKK++ RRRP   PT GD SD+E+AEDGDPE WAT NKSFRQVQSVLDRNRAIIQQV ENQQS
Sbjct:    7 PSSAAKSTMEDSN--HHRSKKSQRRRRPSATPTNGDYSDVEDAEDGDPEAWATLNKSFRQVQSVLDRNRAIIQQVNENQQS 85          
BLAST of FE671968 vs. TrEMBL
Match: B9HHP4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_765569 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.154e-11
Identity = 40/75 (53.33%), Postives = 47/75 (62.67%), Query Frame = 2
Query:   92 SAADSGMEDTSNHHHGSKKNKLRRRPPTTGDSDLEEAEDGDPEVWATKNKSFRQVQSVLDRNRAIIQQVRENQQS 316
            SAA+S MEDTSN             P  T + +  + ++ D EVWAT N SFRQVQSVLDRNR +IQQV EN QS
Sbjct:    9 SAAESSMEDTSN-------------PSITTNQNANKEDEVDAEVWATFNNSFRQVQSVLDRNRVLIQQVNENHQS 70          
BLAST of FE671968 vs. TrEMBL
Match: B9T5X8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0339610 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.396e-10
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 2
Query:  113 EDTSNHHHGSKKNKLRRRPPTTGDSDLEEAEDGDPEVWATKNKSFRQVQSVLDRNRAIIQQVRENQQS 316
            +D++  ++ +  +K R +     + D +E E GDP+VW+T N +FRQVQSVLDRNR++IQQV EN QS
Sbjct:   13 KDSTMDNNATSNSKRRHKNNRHHNEDDDEEEAGDPQVWSTFNTTFRQVQSVLDRNRSLIQQVNENHQS 80          
BLAST of FE671968 vs. TrEMBL
Match: D7T4P8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032821001 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.182e-9
Identity = 33/50 (66.00%), Postives = 35/50 (70.00%), Query Frame = 2
Query:  167 PPTTGDSDLEEAEDGDPEVWATKNKSFRQVQSVLDRNRAIIQQVRENQQS 316
            P   GD    EAE+G  EVW T N SFRQVQSVLDRNR +IQQV EN QS
Sbjct:   33 PADEGDDSGGEAEEGSAEVWETFNDSFRQVQSVLDRNRVLIQQVNENHQS 82          
BLAST of FE671968 vs. TrEMBL
Match: Q6UEI6_MESCR (Early flowering 4 OS=Mesembryanthemum crystallinum GN=ELF4 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.662e-9
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 2
Query:   92 SAADSGMEDTSNHHHGSKKNKLRRRPPTTGDSDLEEA--EDGDPEVWATKNKSFRQVQSVLDRNRAIIQQVRENQQS 316
            S A+S MED  NHH  +     RRR     +++  E     GDP  W    +SF +VQSVLDRNR +IQQ  EN QS
Sbjct:    5 SGAESSMEDGGNHHRQTLAGNRRRRSNNNNNNNNGEEYFSGGDPAEWNAFAESFSKVQSVLDRNRMLIQQANENHQS 81          
BLAST of FE671968 vs. TrEMBL
Match: A5C8U3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018619 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.219e-7
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 2
Query:  107 GMEDTSNHHHGSKKNKLRRRPPTTGDSDLEEAEDGDPEVWATKNKSFRQVQSVLDRNRAIIQQVRENQQS 316
            G   + N H  S ++K         D D ++ E  D EVW T ++SF QVQSVLD+NR +IQQV ENQQS
Sbjct:    2 GEGPSDNTHRHSLEDK---------DDDDDDEEGCDAEVWETLSRSFDQVQSVLDQNRLLIQQVNENQQS 62          
BLAST of FE671968 vs. TrEMBL
Match: O04211_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g40080 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.366e-7
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 2
Query:  194 EEAEDG-DPEVWATKNKSFRQVQSVLDRNRAIIQQVRENQQS 316
            EEAE G DP +W   +++FRQVQSVLDRNR++IQQV +N QS
Sbjct:   15 EEAEQGEDPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQS 56          
BLAST of FE671968 vs. TAIR peptide
Match: AT2G40080.1 (| Symbols: ELF4 | Protein of unknown function (DUF1313) | chr2:16734545-16734880 REVERSE LENGTH=111)

HSP 1 Score: 56.6102 bits (135), Expect = 3.585e-9
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 2
Query:  194 EEAEDG-DPEVWATKNKSFRQVQSVLDRNRAIIQQVRENQQS 316
            EEAE G DP +W   +++FRQVQSVLDRNR++IQQV +N QS
Sbjct:   15 EEAEQGEDPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQS 56          
The following BLAST results are available for this feature:
BLAST of FE671968 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
Q52ZI3_PEA3.204e-2375.31Early flowering 4 OS=Pisum sativum GN=ELF4 PE=2 SV... [more]
B9HHP4_POPTR2.154e-1153.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9T5X8_RICCO1.396e-1048.53Putative uncharacterized protein OS=Ricinus commun... [more]
D7T4P8_VITVI1.182e-966.00Whole genome shotgun sequence of line PN40024, sca... [more]
Q6UEI6_MESCR7.662e-945.45Early flowering 4 OS=Mesembryanthemum crystallinum... [more]
A5C8U3_VITVI3.219e-747.14Putative uncharacterized protein OS=Vitis vinifera... [more]
O04211_ARATH9.366e-764.29Expressed protein OS=Arabidopsis thaliana GN=At2g4... [more]
back to top
BLAST of FE671968 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G40080.13.585e-964.29| Symbols: ELF4 | Protein of unknown function (DUF... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009741Protein of unknown function DUF1313PFAMPF07011DUF1313coord: 56..93
score: 2.9
NoneNo IPR availableSEGsegsegcoord: 3..10
score
NoneNo IPR availableSEGsegsegcoord: 1..12
score: NAcoord: 19..27
score
NoneNo IPR availableSEGsegsegcoord: 24..36
score
NoneNo IPR availableSEGsegsegcoord: 55..67
score
NoneNo IPR availableSEGsegsegcoord: 27..42
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE671968 ID=FE671968; Name=FE671968; organism=Cicer arietinum; type=EST; length=317bp
CAAACAAAAAAGACATGACGGTTTTTGCCGAACATAACTAAACTTGTCTT
TTTTTTCTTTTCTTCTTATGACCACACTTTATTCACCCTCCTCCGCCGCA
GATTCCGGTATGGAAGACACCTCTAACCACCACCACGGGTCGAAGAAGAA
CAAGCTCCGCCGCCGTCCCCCAACCACCGGAGATTCTGACTTGGAGGAAG
CAGAGGACGGCGATCCCGAGGTGTGGGCGACAAAGAACAAGAGTTTCCGG
CAGGTGCAGTCGGTGCTTGACCGGAACAGGGCAATAATTCAGCAGGTGAG
GGAGAATCAACAATCTA
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR009741EARLY_FLOWERING_4_dom