FE671982

EST Overview


Name	FE671982
Unique Name	FE671982
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	236

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of FE671982 vs. SwissProt
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.214e-16
Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P F+ Y  QV+ N+   G  L  +GY+LVTEGT++ LVLWD R  G+TG+ +EK CD   IT+N NAV G+  A+AP
Sbjct:  327 PDFQEYTKQVRRNSQTMGEELKKRGYSLVTEGTDNHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAP 403

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.028e-15
Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 3

Query:    9 FKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            FK YA QVK NA A GN L++KGY LVT GT++ L+LWD R   LTG   EK  D   IT+N NAV G+  A++P
Sbjct:  306 FKEYALQVKKNAAAIGNALMNKGYKLVTNGTDNHLILWDLRPKELTGNKFEKAADIANITVNKNAVHGDTNAISP 380

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa GN=for PE=3 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 4.940e-10
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P FK Y  +V ANA A    L   GY LV++GT+  +VL D R IG+ G  VE   ++  IT N NAV G+ +AL P
Sbjct:  314 PEFKEYQQKVVANAKALEKKLKELGYKLVSDGTDSHMVLVDLRPIGVDGARVEFLLEQINITCNKNAVPGDKSALTP 390

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.426e-10
Identity = 32/77 (41.56%), Postives = 44/77 (57.14%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P FK Y TQV  NA A  N   + GY LV+ GT+  +VL   R  G+ G  VE  C++  I +N N++ G+ +AL P
Sbjct:  313 PEFKEYQTQVLKNAKALENEFQTLGYRLVSNGTDSHMVLVSLREKGVDGARVEYVCEKINIALNKNSIPGDKSALVP 389

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYA_SYMTH (Serine hydroxymethyltransferase OS=Symbiobacterium thermophilum GN=glyA PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.426e-10
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAV 206
            P ++AY  QV  NA A    L+ +GY LVT GT++ L+L D R  G+TG + E   DR  IT+N NA+
Sbjct:  276 PDYRAYCGQVVKNAKALAQALLERGYRLVTGGTDNHLMLVDLRPKGITGRDAEHLLDRVSITVNKNAI 343

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.100e-9
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P F+ Y+ Q+  NA A  N L+ +GY+LV+ GT++ LVL D R  GL G   E+  +   IT N N   G+ +A+ P
Sbjct:  345 PMFREYSLQILKNAQAMANALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITP 421

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYA_HELMI (Serine hydroxymethyltransferase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glyA PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.437e-9
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAV 206
            P F AY  Q+ ANA A    L  +G+ LV+ GT++ L+L D R   LTG   EK  D C+IT+N NA+
Sbjct:  279 PAFTAYQKQIAANAAALAKGLTDRGFQLVSGGTDNHLMLVDLRNKQLTGKEAEKRLDECRITVNKNAI 346

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 2.452e-9
Identity = 31/77 (40.26%), Postives = 44/77 (57.14%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P FK Y TQV  NA A  +   + GY LV+ GT+  +VL   R  G+ G  VE  C++  I +N N++ G+ +AL P
Sbjct:  313 PEFKEYQTQVLKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVP 389

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.452e-9
Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAV 206
            P F+ YA Q++ NA A    L+++G TLV+ GT++ L+L D R  GLTG   ++  D+  IT+N NA+
Sbjct:  277 PEFRQYAAQIRRNARALAEGLMAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAI 344

[Close]

BLAST of FE671982 vs. SwissProt
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.452e-9
Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAV 206
            P FK YA Q++ NA A    L ++G TLV+ GT++ L+L D R  GLTG   ++  D+  IT+N NA+
Sbjct:  277 PEFKQYAAQIRRNAKALAEGLHAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAI 344

[Close]

BLAST of FE671982 vs. TrEMBL
Match: C5Y297_SORBI (Serine hydroxymethyltransferase OS=Sorghum bicolor GN=Sb05g014880 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.802e-25
Identity = 55/77 (71.43%), Postives = 63/77 (81.82%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+SKGY +VT+GTE+ LVLWD R +GLTG  VEK CD C IT+N NAV G+ +ALAP
Sbjct:  309 PGFKAYAKQVKANAVAIGNYLMSKGYKMVTDGTENHLVLWDLRPLGLTGNKVEKLCDLCHITLNKNAVFGDSSALAP 385

[Close]

BLAST of FE671982 vs. TrEMBL
Match: D7SNS3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_29.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021046001 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.897e-25
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+SKGY LVT GTE+ LVLWD R +GLTG  VEK CD C IT+N NAV G+ +ALAP
Sbjct:   94 PGFKAYAKQVKANAVALGNYLMSKGYKLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAP 170

[Close]

BLAST of FE671982 vs. TrEMBL
Match: B6T7J7_MAIZE (Serine hydroxymethyltransferase OS=Zea mays PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.293e-24
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+SKGY +VT+GTE+ LVLWD R +GLTG  VEK CD C IT+N NAV G+ +AL+P
Sbjct:  309 PGFKAYAKQVKANAVAIGNYLMSKGYKMVTDGTENHLVLWDLRPLGLTGNKVEKLCDLCHITLNKNAVFGDSSALSP 385

[Close]

BLAST of FE671982 vs. TrEMBL
Match: B4FBF4_MAIZE (Serine hydroxymethyltransferase OS=Zea mays PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.293e-24
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+SKGY +VT+GTE+ LVLWD R +GLTG  VEK CD C IT+N NAV G+ +AL+P
Sbjct:  309 PGFKAYAKQVKANAVAIGNYLMSKGYKMVTDGTENHLVLWDLRPLGLTGNKVEKLCDLCHITLNKNAVFGDSSALSP 385

[Close]

BLAST of FE671982 vs. TrEMBL
Match: C6ZJY6_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.688e-24
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+ KGY+LVT GTE+ LVLWD R +GLTG  VEK CD C IT+N NAV G+ +ALAP
Sbjct:  309 PGFKAYAKQVKANAVALGNYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAP 385

[Close]

BLAST of FE671982 vs. TrEMBL
Match: C6THM7_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.688e-24
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+ KGY+LVT GTE+ LVLWD R +GLTG  VEK CD C IT+N NAV G+ +ALAP
Sbjct:  309 PGFKAYAKQVKANAVALGNYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAP 385

[Close]

BLAST of FE671982 vs. TrEMBL
Match: B9N0U0_POPTR (Serine hydroxymethyltransferase OS=Populus trichocarpa GN=SHMT6 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.688e-24
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+SKGY LVTEGTE+ LVLWD R +GLTG  VEK CD   IT+N NAV G+ +ALAP
Sbjct:  309 PGFKAYAKQVKANAVALGNYLMSKGYKLVTEGTENHLVLWDLRPLGLTGNKVEKLCDLANITVNKNAVFGDSSALAP 385

[Close]

BLAST of FE671982 vs. TrEMBL
Match: A9PL09_POPTM (Serine hydroxymethyltransferase OS=Populus tremuloides GN=SHMT6 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.688e-24
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+SKGY LVTEGTE+ LVLWD R +GLTG  VEK CD   IT+N NAV G+ +ALAP
Sbjct:  309 PGFKAYAKQVKANAVALGNYLMSKGYKLVTEGTENHLVLWDLRPLGLTGNKVEKLCDLANITVNKNAVFGDSSALAP 385

[Close]

BLAST of FE671982 vs. TrEMBL
Match: A9PCX3_POPTR (Serine hydroxymethyltransferase OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.688e-24
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFKAYA QVKANAVA GNYL+SKGY LVTEGTE+ LVLWD R +GLTG  VEK CD   IT+N NAV G+ +ALAP
Sbjct:  309 PGFKAYAKQVKANAVALGNYLMSKGYKLVTEGTENHLVLWDLRPLGLTGNKVEKLCDLANITVNKNAVFGDSSALAP 385

[Close]

BLAST of FE671982 vs. TrEMBL
Match: Q9FPJ3_ARATH (Serine hydroxymethyltransferase OS=Arabidopsis thaliana GN=AT4g13930/dl3005c PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.205e-24
Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFK YA QVKANAVA GNYL+SKGY +VT GTE+ LVLWD R +GLTG  VEK CD C IT+N NAV G+ +ALAP
Sbjct:  309 PGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAP 385

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT4G13930.1 (| Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471)

HSP 1 Score: 115.161 bits (287), Expect = 8.520e-27
Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            PGFK YA QVKANAVA GNYL+SKGY +VT GTE+ LVLWD R +GLTG  VEK CD C IT+N NAV G+ +ALAP
Sbjct:  309 PGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKVEKLCDLCSITLNKNAVFGDSSALAP 385

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT4G13890.1 (| Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:8032146-8033718 REVERSE LENGTH=470)

HSP 1 Score: 102.834 bits (255), Expect = 4.375e-23
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P FK YA QVKANA    +YLI+KGYTLVT+GT++ L+LWD R +GLTG  VEK C+ C IT+N NAV G+ + LAP
Sbjct:  309 PSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAP 385

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT1G22020.1 (| Symbols: SHM6 | serine hydroxymethyltransferase 6 | chr1:7754599-7757087 FORWARD LENGTH=599)

HSP 1 Score: 69.707 bits (169), Expect = 4.105e-13
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P +K Y  QVK NA A  + LIS+   L+T GT++ L+LWD   +GLTG   EK C+ C IT+N  A+  E   ++P
Sbjct:  444 PEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISP 520

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT1G36370.1 (| Symbols: SHM7 | serine hydroxymethyltransferase 7 | chr1:13696240-13698576 REVERSE LENGTH=598)

HSP 1 Score: 69.3218 bits (168), Expect = 5.361e-13
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P +KAY  Q+K NA A    L+ +   LVT GT++ L+LWD   +GLTG   EK C+ C IT+N  A+ G+   ++P
Sbjct:  440 PEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGKVYEKVCEMCHITLNKTAIFGDNGTISP 516

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT4G32520.2 (| Symbols: SHM3 | serine hydroxymethyltransferase 3 | chr4:15689642-15692334 REVERSE LENGTH=529)

HSP 1 Score: 67.3958 bits (163), Expect = 2.037e-12
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P FKAY  +V +N  A  N L+  G+ LV+ G+++ LVL D R +G+ G  VEK  D   IT+N N+V G+ +AL P
Sbjct:  370 PEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKNSVPGDKSALVP 446

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT4G32520.1 (| Symbols: SHM3, AtSHMT3 | serine hydroxymethyltransferase 3 | chr4:15689642-15692334 REVERSE LENGTH=529)

HSP 1 Score: 67.3958 bits (163), Expect = 2.037e-12
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P FKAY  +V +N  A  N L+  G+ LV+ G+++ LVL D R +G+ G  VEK  D   IT+N N+V G+ +AL P
Sbjct:  370 PEFKAYQKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKNSVPGDKSALVP 446

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT5G26780.1 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=517)

HSP 1 Score: 58.151 bits (139), Expect = 1.236e-9
Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 3

Query:    3 PGFKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P +KAY  QV  N       L++KGY LV+ GT++ LVL + +  G+ G+ VEK  +   I  N N V G+ +A+ P
Sbjct:  350 PEYKAYQDQVLRNCSKFAETLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVP 426

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT4G37930.1 (| Symbols: SHM1, STM, SHMT1 | serine transhydroxymethyltransferase 1 | chr4:17831891-17834742 REVERSE LENGTH=517)

HSP 1 Score: 56.9954 bits (136), Expect = 2.753e-9
Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = 3

Query:    9 FKAYATQVKANAVAHGNYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            +KAY  QV +N+      L+ +GY LV+ GT++ LVL + +  G+ G+ VEK  +   I  N N V G+ +A+ P
Sbjct:  352 YKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVP 426

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT5G26780.2 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=533)

HSP 1 Score: 49.6766 bits (117), Expect = 4.396e-7
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 3

Query:    3 PGFKAYATQVKANA-------------VAHG---NYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P +KAY  QV  N              +++G     L++KGY LV+ GT++ LVL + +  G+ G+ VEK  +   I  N N V G+ +A+ P
Sbjct:  350 PEYKAYQDQVLRNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVP 442

[Close]

BLAST of FE671982 vs. TAIR peptide
Match: AT5G26780.3 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=533)

HSP 1 Score: 49.6766 bits (117), Expect = 4.396e-7
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 3

Query:    3 PGFKAYATQVKANA-------------VAHG---NYLISKGYTLVTEGTEDQLVLWDTRVIGLTGTNVEKFCDRCKITMNNNAVLGEYTALAP 233
            P +KAY  QV  N              +++G     L++KGY LV+ GT++ LVL + +  G+ G+ VEK  +   I  N N V G+ +A+ P
Sbjct:  350 PEYKAYQDQVLRNCSKFAELDIRPTVIISYGLSMQTLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVP 442

The following BLAST results are available for this feature:

BLAST of FE671982 vs. SwissProt
BLAST of FE671982 vs. TrEMBL
BLAST of FE671982 vs. TAIR peptide

BLAST of FE671982 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
GLYC2_DICDI	1.214e-16	50.65	Serine hydroxymethyltransferase 2 OS=Dictyostelium...	[more]
GLYC1_DICDI	1.028e-15	54.67	Serine hydroxymethyltransferase 1 OS=Dictyostelium...	[more]
GLYC_NEUCR	4.940e-10	45.45	Serine hydroxymethyltransferase, cytosolic OS=Neur...	[more]
GLYC_CANGA	8.426e-10	41.56	Serine hydroxymethyltransferase, cytosolic OS=Cand...	[more]
GLYA_SYMTH	8.426e-10	45.59	Serine hydroxymethyltransferase OS=Symbiobacterium...	[more]
GLYM_BOVIN	1.100e-9	40.26	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYA_HELMI	1.437e-9	45.59	Serine hydroxymethyltransferase OS=Heliobacterium ...	[more]
GLYC_YEAST	2.452e-9	40.26	Serine hydroxymethyltransferase, cytosolic OS=Sacc...	[more]
GLYA_CHLSY	2.452e-9	42.65	Serine hydroxymethyltransferase OS=Chloroflexus au...	[more]
GLYA_CHLAD	2.452e-9	44.12	Serine hydroxymethyltransferase OS=Chloroflexus ag...	[more]

BLAST of FE671982 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C5Y297_SORBI	5.802e-25	71.43	Serine hydroxymethyltransferase OS=Sorghum bicolor...	[more]
D7SNS3_VITVI	9.897e-25	72.73	Whole genome shotgun sequence of line PN40024, sca...	[more]
B6T7J7_MAIZE	1.293e-24	70.13	Serine hydroxymethyltransferase OS=Zea mays PE=2 S...	[more]
B4FBF4_MAIZE	1.293e-24	70.13	Serine hydroxymethyltransferase OS=Zea mays PE=2 S...	[more]
C6ZJY6_SOYBN	1.688e-24	71.43	Serine hydroxymethyltransferase OS=Glycine max PE=...	[more]
C6THM7_SOYBN	1.688e-24	71.43	Serine hydroxymethyltransferase OS=Glycine max PE=...	[more]
B9N0U0_POPTR	1.688e-24	72.73	Serine hydroxymethyltransferase OS=Populus trichoc...	[more]
A9PL09_POPTM	1.688e-24	72.73	Serine hydroxymethyltransferase OS=Populus tremulo...	[more]
A9PCX3_POPTR	1.688e-24	72.73	Serine hydroxymethyltransferase OS=Populus trichoc...	[more]
Q9FPJ3_ARATH	2.205e-24	70.13	Serine hydroxymethyltransferase OS=Arabidopsis tha...	[more]

BLAST of FE671982 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G13930.1	8.520e-27	70.13	\| Symbols: SHM4 \| serine hydroxymethyltransferase ...	[more]
AT4G13890.1	4.375e-23	61.04	\| Symbols: SHM5, EDA36, EDA37 \| Pyridoxal phosphat...	[more]
AT1G22020.1	4.105e-13	44.16	\| Symbols: SHM6 \| serine hydroxymethyltransferase ...	[more]
AT1G36370.1	5.361e-13	42.86	\| Symbols: SHM7 \| serine hydroxymethyltransferase ...	[more]
AT4G32520.2	2.037e-12	44.16	\| Symbols: SHM3 \| serine hydroxymethyltransferase ...	[more]
AT4G32520.1	2.037e-12	44.16	\| Symbols: SHM3, AtSHMT3 \| serine hydroxymethyltra...	[more]
AT5G26780.1	1.236e-9	38.96	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]
AT4G37930.1	2.753e-9	37.33	\| Symbols: SHM1, STM, SHMT1 \| serine transhydroxym...	[more]
AT5G26780.2	4.396e-7	33.33	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]
AT5G26780.3	4.396e-7	33.33	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 1..77 score: 7.8
IPR001085	Serine hydroxymethyltransferase	PFAM	PF00464	SHMT	coord: 2..77 score: 3.2
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	3.90.1150.10	no description	coord: 1..75 score: 8.3
IPR015424	Pyridoxal phosphate-dependent transferase, major domain	SUPERFAMILY	53383	PLP-dependent transferases	coord: 1..77 score: 3.4

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE671982 ID=FE671982; Name=FE671982; organism=Cicer arietinum; type=EST; length=236bp
CGCCCGGATTCAAGGCATATGCCACGCAAGTTAAGGCCAATGCAGTTGCA
CATGGAAATTACTTGATCAGCAAGGGATACACCCTTGTCACGGAAGGAAC
TGAAGATCAGCTTGTCTTGTGGGATACTCGCGTGATTGGCTTGACGGGCA
CAAATGTGGAAAAATTTTGTGATCGATGTAAAATCACGATGAACAATAAT
GCTGTATTAGGTGAGTACACTGCCTTGGCTCCTGTA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004372	glycine hydroxymethyltransferase activity
GO:0003824	catalytic activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006544	glycine metabolic process
GO:0006563	L-serine metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR001085	Ser_HO-MeTrfase
IPR015422	PyrdxlP-dep_Trfase_small
IPR015424	PyrdxlP-dep_Trfase

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