GR398720

EST Overview
NameGR398720
Unique NameGR398720
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length452
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR398720 vs. TrEMBL
Match: B9IMA1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_737941 PE=4 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.437e-31
Identity = 83/157 (52.87%), Postives = 102/157 (64.97%), Query Frame = 3
Query:    3 DLHQV-NGKGSAMSRFQNTGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEA-DSKDPRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQVAITSDEKSLMSRVNSLCC 452
            D +QV + K S +S FQ+  SP ++ S S  IE  DP+  T D M  EAPS SS VMD RA EG    EA DSK PRN D IK+PGLRPSMS+ DL   I     E++ SGN   + D  ECQ +LE+IAQ+LL+D Q   +SDEK +M+RVNSLCC
Sbjct:  303 DFNQVESAKVSVVSGFQDLASPSAAQSSSLEIEKGDPTASTSDPMSREAPSPSS-VMDSRAIEGRGICEAVDSKAPRNWDQIKVPGLRPSMSMTDLMNHIGNCISEQMTSGNQPFSADGSECQDILEDIAQYLLSDTQQTTSSDEKGIMARVNSLCC 458          
BLAST of GR398720 vs. TrEMBL
Match: B9HBE8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_416401 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.537e-28
Identity = 78/157 (49.68%), Postives = 101/157 (64.33%), Query Frame = 3
Query:    3 DLHQV-NGKGSAMSRFQNTGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEA-DSKDPRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQVAITSDEKSLMSRVNSLCC 452
            D +QV + K S +S F +  SP ++ S S  I+  DPS  T D M  EAPS SS VMD RA EG+   EA DS+ PRN D IK+PGLR SMS+ DL   I     E++ SGN   + ++ EC+ +LE+IAQ LL+D Q   +SDEK +M+RVNSLCC
Sbjct:  274 DFNQVESAKVSVVSGFHHLASPSAAQSSSLEIDKEDPSASTSDHMSREAPSPSS-VMDTRAIEGSGICEAVDSRAPRNWDQIKVPGLRHSMSMTDLMNHIGNCISEQMTSGNQLFSANESECRDILEDIAQCLLSDTQQTTSSDEKRIMARVNSLCC 429          
BLAST of GR398720 vs. TrEMBL
Match: B9SQX8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1405850 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.644e-27
Identity = 80/148 (54.05%), Postives = 99/148 (66.89%), Query Frame = 3
Query:   30 SAMSRFQN-TGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEA-DSKDPRNLDHIKLPGLRPSMSVNDLFGQIE-----EIISGNSSLTDDKLECQQMLEEIAQHLLNDNQVAITSDEKSLMSRVNSLCC 452
            S+ S FQ+   SP ++ S S  +E  D +G T + M  EAPS SS VMD RA EG  N EA DSK  RN D IK+PGL PSMS++DL   IE     +I SGN SL+ D  E Q +LE+IAQ+LL+DNQ+  +SDEK LM+RVNSLCC
Sbjct:  314 SSASGFQDLVASPSAAHSSS--LEIGDHAGTTSEQMSREAPSPSS-VMDTRAIEGNGNCEAVDSKGLRNWDQIKVPGLHPSMSMSDLMNHIENCISEQITSGNPSLSADGSEGQNILEDIAQYLLSDNQLTTSSDEKRLMARVNSLCC 458          
BLAST of GR398720 vs. TrEMBL
Match: B9GLP3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814792 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.059e-18
Identity = 65/166 (39.16%), Postives = 94/166 (56.63%), Query Frame = 3
Query:    3 DLHQVNGKG--------SAMSRFQNTGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSE--VMDYRATEGTL-NSEADSKDPRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQVAITSDEKSLMSRVNSLCC 452
            DLH+ +GKG        +A+   Q  G P   LS S    +++  G+T  S  + +  TSS   VM+  A E T  N   + + P N D IK+PGL PS+S++DL   I     E++ SGNS L+   ++   +L+EI Q+LL D+QV   SDE+S++S VNSLCC
Sbjct:  258 DLHE-SGKGLDSEVEDRTAVFALQEAGPPSGVLSSSL---NNECQGLTCQSPENISQQTSSTTLVMETHAFEETRSNRTGEQQLPSNCDQIKVPGLHPSISMSDLVNHIGHCISEQMTSGNSILSGGDIKSSDILDEITQYLLGDSQVMSASDEQSVVSTVNSLCC 419          
BLAST of GR398720 vs. TrEMBL
Match: B9RGP4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1442490 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.909e-16
Identity = 54/131 (41.22%), Postives = 78/131 (59.54%), Query Frame = 3
Query:   75 LSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEADSKDPRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQVAITSDEKSLMSRVNSLCC 452
            LS S + EH    G T +S+  E PS SS+    R    +L ++     P + + IK+PGL  SMS++D    I     E++ +GN ++ DD+ +   +LEEI Q+LL+D Q+   SDE+SLMSRVNSLCC
Sbjct:  297 LSSSLSDEHQFFIGRTPESISRETPSPSSDAYGIREFR-SLRADRQMM-PSHWNQIKVPGLHQSMSMSDFVNHIGQCISEQMTTGNPTILDDETKYNDILEEITQYLLSDYQLTSASDEQSLMSRVNSLCC 425          
BLAST of GR398720 vs. TrEMBL
Match: B9GVV4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830969 PE=4 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.962e-16
Identity = 55/140 (39.29%), Postives = 75/140 (53.57%), Query Frame = 3
Query:   48 QNTGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEADSKDPRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQVAITSDEKSLMSRVNSLCC 452
            +  G P   L  S   E       T +++  E  STS  +  +   E   N   + K P N D IK+PGL  SMS++DL   I     E++ SGNS L    ++   +L+EI Q+LL D+QV   SDE+SLM+RVNSLCC
Sbjct:  264 REAGQPSGVLLSSLNNECQGFLCQTPENISHETSSTSFGMETHVFEEIRSNRTGEQKLPSNWDQIKVPGLHSSMSMSDLVNHIGHCISEQMTSGNSILCGGDIKSSDILDEITQYLLGDSQVTSASDEQSLMTRVNSLCC 403          
BLAST of GR398720 vs. TrEMBL
Match: D7U1G3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_37.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023689001 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.035e-13
Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 3
Query:   24 KGSAMSRFQNTGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEADS-KDPRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSL 326
            +GS +S FQ+  SP ++ S S  IE  DP G+  +++  E+PS SS VMD RA EG+ N E D  K  RN + +K+PGL PS+S++DL   I     E++ SGN +L
Sbjct:  305 QGSTISGFQDVASPTAAQSSSLKIEPRDPVGLASENLSRESPSPSS-VMDTRAMEGSRNCETDDLKRQRNWEQLKVPGLHPSISMSDLMNHIENRISEQMTSGNPAL 410          
BLAST of GR398720 vs. TrEMBL
Match: C5Z5U8_SORBI (Putative uncharacterized protein Sb10g005890 OS=Sorghum bicolor GN=Sb10g005890 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.035e-13
Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 3
Query:   33 AMSRFQNTGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEADSKD-PRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQ--VAITSDEKSLMSRVNSLCC 452
            A+  +  + SP +  S S   E++D  G+  + +P +A  T    +  ++    +N  A   + P     +K+PGLRPSMSV+DL   +     E+I SGN +L ++++  ++ LE IAQ+LL D Q      SDE+SLM+RV+SLCC
Sbjct:  243 ALPGYSGSVSPCAGSSISAKNENNDSIGMPAEYLP-QAVGTGVGAVGVQSVGRNVNGAAPEFNIPHWWSQLKVPGLRPSMSVDDLVSHLGNCISEQITSGNPALANNEVPTKETLEGIAQYLLGDTQGPPVSASDERSLMARVDSLCC 389          
BLAST of GR398720 vs. TrEMBL
Match: Q5SMV3_ORYSJ (Putative uncharacterized protein P0470C02.5-1 OS=Oryza sativa subsp. japonica GN=P0470C02.5-1 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.351e-13
Identity = 54/146 (36.99%), Postives = 81/146 (55.48%), Query Frame = 3
Query:   36 MSRFQNTGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEADSKDPRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQ--VAITSDEKSLMSRVNSLCC 452
            +S F  + SP +  S S  IE +D S  T     ++  +     ++ +     +N   +   P     +K+PGLRPSMSV+DL   +     E+I S N +L  +++  ++ LEEIAQ+LL D Q   A TSDE+SLM+RV+SLCC
Sbjct:   71 LSGFSGSLSPCAGSSMSAKIEVND-SIATQAGFLAQPGNPGPSAVNVQGVSRNVNGAPELNIPSWWSQLKVPGLRPSMSVDDLVNHLGNCISEQITSVNPTLPSNEVPTKETLEEIAQYLLGDAQGPPASTSDERSLMARVDSLCC 215          
BLAST of GR398720 vs. TrEMBL
Match: Q0DDZ8_ORYSJ (Os06g0186600 protein OS=Oryza sativa subsp. japonica GN=Os06g0186600 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.351e-13
Identity = 54/146 (36.99%), Postives = 81/146 (55.48%), Query Frame = 3
Query:   36 MSRFQNTGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEADSKDPRNLDHIKLPGLRPSMSVNDLFGQI-----EEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQ--VAITSDEKSLMSRVNSLCC 452
            +S F  + SP +  S S  IE +D S  T     ++  +     ++ +     +N   +   P     +K+PGLRPSMSV+DL   +     E+I S N +L  +++  ++ LEEIAQ+LL D Q   A TSDE+SLM+RV+SLCC
Sbjct:  244 LSGFSGSLSPCAGSSMSAKIEVND-SIATQAGFLAQPGNPGPSAVNVQGVSRNVNGAPELNIPSWWSQLKVPGLRPSMSVDDLVNHLGNCISEQITSVNPTLPSNEVPTKETLEEIAQYLLGDAQGPPASTSDERSLMARVDSLCC 388          
BLAST of GR398720 vs. TAIR peptide
Match: AT2G24100.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr2:10244921-10246715 FORWARD LENGTH=466)

HSP 1 Score: 67.3958 bits (163), Expect = 3.803e-12
Identity = 49/142 (34.51%), Postives = 71/142 (50.00%), Query Frame = 3
Query:   30 SAMSRFQN--TGSPHSSLSPSFTIEHSDPSGITLDSMPSEAPSTSSEVMDYRATEGTLNSEADSKDPRNLDHIKLPGLRPSMSVNDLFGQIEEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQVAITSDEKSLMSRVNSLC 449
            S +S F++      H+  SP      S+   ++ D++      + S VMD RA EG +    DS++      IK+PGL  S+S+ND            + L+D   E  Q  EE+ Q LL+DN     SDEKS+MS+VNS C
Sbjct:  262 SRLSIFEDPSVSGSHNIASPVGAQSSSEHVSLSHDAL------SPSSVMDARAIEG-VGGSIDSRNTNGWSQIKMPGLHQSISMNDFL----------TFLSDQACENNQEFEEMKQLLLSDNTQTDPSDEKSVMSKVNSFC 386          
BLAST of GR398720 vs. TAIR peptide
Match: AT4G30780.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | chr4:14990523-14992855 FORWARD LENGTH=589)

HSP 1 Score: 53.9138 bits (128), Expect = 4.351e-8
Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 3
Query:  207 ADSKDPRNLDHIKLPGLRPSMSVNDLFGQIEEIISGNSSLTDDKLECQQMLEEIAQHLLNDNQVAITSDEKSLMSRVNSL 446
            +DS++  + D IK+PGL  SMSV+D  G + +   G+        E  +  E + Q LL+DN      DEKSLM RVNSL
Sbjct:  423 SDSRNITDSDQIKVPGLHQSMSVSDFVGLLSDSAGGSHP------EHMEKFEIMKQQLLSDNIQFEAPDEKSLMPRVNSL 496          
The following BLAST results are available for this feature:
BLAST of GR398720 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9IMA1_POPTR1.437e-3152.87Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9HBE8_POPTR2.537e-2849.68Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9SQX8_RICCO1.644e-2754.05Putative uncharacterized protein OS=Ricinus commun... [more]
B9GLP3_POPTR4.059e-1839.16Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RGP4_RICCO2.909e-1641.22Putative uncharacterized protein OS=Ricinus commun... [more]
B9GVV4_POPTR4.962e-1639.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7U1G3_VITVI1.035e-1343.93Whole genome shotgun sequence of line PN40024, sca... [more]
C5Z5U8_SORBI1.035e-1335.81Putative uncharacterized protein Sb10g005890 OS=So... [more]
Q5SMV3_ORYSJ1.351e-1336.99Putative uncharacterized protein P0470C02.5-1 OS=O... [more]
Q0DDZ8_ORYSJ1.351e-1336.99Os06g0186600 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of GR398720 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G24100.13.803e-1234.51| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT4G30780.14.351e-841.25| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR398720 ID=GR398720; Name=GR398720; organism=Cicer arietinum; type=EST; length=452bp
GTGATTTGCATCAAGTCAATGGCAAAGGTTCAGCAATGTCTCGTTTCCAG
AACACGGGATCTCCTCATTCATCCCTGTCACCATCGTTCACAATTGAGCA
CAGTGATCCTTCTGGCATTACCTTAGACAGTATGCCCTCTGAAGCACCTT
CCACCAGTTCAGAAGTCATGGACTATCGTGCAACAGAAGGGACTTTAAAT
TCTGAAGCTGATTCAAAGGACCCTAGAAACTTGGATCATATAAAACTGCC
TGGGCTCCGTCCTTCTATGTCAGTGAACGATTTATTTGGTCAGATTGAAG
AAATAATATCTGGGAATTCATCCCTTACTGATGACAAATTGGAGTGCCAG
CAAATGCTGGAGGAAATAGCACAGCATCTGCTTAATGACAATCAGGTTGC
AATAACTTCAGACGAAAAATCACTTATGTCAAGGGTCAATTCTCTTTGCT
GT
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