GR407754

EST Overview
NameGR407754
Unique NameGR407754
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length343
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR407754 vs. TrEMBL
Match: D7U5K8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024222001 PE=4 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.782e-43
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 2
Query:    2 GGGSEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            G  SEKQ+VARTVIFGGL+N+DMA+ VH +AR++GTVCSV YPL + +L+ HGL QDGC +DASAVLY+SVK A ASVA LH+KEI GG VWARQLGGEG+KTQKWKLIVRNLP
Sbjct:  158 GSFSEKQRVARTVIFGGLLNADMAEVVHLRAREVGTVCSVTYPLPKEELEHHGLSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNLP 271          
BLAST of GR407754 vs. TrEMBL
Match: B9HRI9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1086748 PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.442e-41
Identity = 81/111 (72.97%), Postives = 96/111 (86.49%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            SEKQ+VARTVIFGGL+N  MA+DVH++A++ GTVCSV YPL + +L++HGL QDGC   ASAVL+TSVK AR+SVA LH+KEI GG VWARQLGGEG KTQKWKLI+RNLP
Sbjct:  178 SEKQRVARTVIFGGLLNDAMAEDVHQRAKETGTVCSVTYPLPKEELKKHGLEQDGCRSGASAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNLP 288          
BLAST of GR407754 vs. TrEMBL
Match: B9RH99_RICCO (RNA-binding protein, putative OS=Ricinus communis GN=RCOM_1448870 PE=4 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.911e-40
Identity = 79/111 (71.17%), Postives = 93/111 (83.78%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            SEKQ+VARTVIFGGL++  MA++VHR AR++G  CSV YPL + DL+++GL QDGC  D SA+LYTSVK AR SV  LH+KEI GG VWARQLGGEG+KTQKWKLIVRNLP
Sbjct:  164 SEKQRVARTVIFGGLLDDAMAEEVHRLAREVGNACSVTYPLPKEDLEKNGLAQDGCRSDVSAILYTSVKEARLSVRMLHQKEIRGGIVWARQLGGEGSKTQKWKLIVRNLP 274          
BLAST of GR407754 vs. TrEMBL
Match: Q9SJT4_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g21440 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.063e-38
Identity = 75/111 (67.57%), Postives = 95/111 (85.59%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            S+KQ+VARTVIFGGL N++MA+ VH + ++IGTVCSV+YPL + +LQQ+GL QDGC  +ASAVL+TSVKSA A+VA LH+ E+ G  +WARQLGGEG+K QKWKLI+RNLP
Sbjct:  229 SDKQRVARTVIFGGLANAEMAEVVHSRVKEIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAAVAKLHQTEVKGNLIWARQLGGEGSKAQKWKLIIRNLP 339          
BLAST of GR407754 vs. TrEMBL
Match: D7LBD4_ARALY (RNA recognition motif-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481009 PE=4 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.520e-38
Identity = 76/111 (68.47%), Postives = 94/111 (84.68%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            S+KQ+VARTVIFGGL N++MA+ VH + ++IGTVCSV+YPL + +LQQ+GL QDGC  +ASAVL+TSVKSA A VA LH+ EI G  +WARQLGGEG+K QKWKLI+RNLP
Sbjct:  211 SDKQRVARTVIFGGLANAEMAEVVHSRVKEIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAVVAKLHQTEIKGNLIWARQLGGEGSKAQKWKLIIRNLP 321          
BLAST of GR407754 vs. TrEMBL
Match: C5WX23_SORBI (Putative uncharacterized protein Sb01g004800 OS=Sorghum bicolor GN=Sb01g004800 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.259e-34
Identity = 71/111 (63.96%), Postives = 89/111 (80.18%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            SEKQ+VA+TVIFGGL +S MA +V RQAR+IG+V SV YPL + ++  HGL +DGCT D +AVL+ SVKSA  SV  LH+KE+ G  VWARQLGGEG+K +KW++IVRNLP
Sbjct:  184 SEKQRVAKTVIFGGLQDSAMASEVFRQAREIGSVVSVNYPLPKGEMDFHGLARDGCTSDMAAVLFASVKSACDSVVQLHRKEVKGAIVWARQLGGEGSKIRKWRVIVRNLP 294          
BLAST of GR407754 vs. TrEMBL
Match: Q10BX7_ORYSJ (Os03g0801800 protein OS=Oryza sativa subsp. japonica GN=Os03g0801800 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.815e-33
Identity = 70/111 (63.06%), Postives = 88/111 (79.28%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            SEKQ+VA+TVIFGGL +  MA +V R A +IGTV SV YPL + +++ HGL +DGCT DA+AVL+ SVKSA  SV  LH+KE+ G  VWARQLGGEG+K +KW++IVRNLP
Sbjct:  200 SEKQRVAKTVIFGGLRDFAMASEVFRLAGEIGTVVSVSYPLPKEEMELHGLERDGCTTDAAAVLFASVKSAWDSVVHLHRKEVKGAVVWARQLGGEGSKIRKWRVIVRNLP 310          
BLAST of GR407754 vs. TrEMBL
Match: A2XN06_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13935 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.815e-33
Identity = 70/111 (63.06%), Postives = 88/111 (79.28%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            SEKQ+VA+TVIFGGL +  MA +V R A +IGTV SV YPL + +++ HGL +DGCT DA+AVL+ SVKSA  SV  LH+KE+ G  VWARQLGGEG+K +KW++IVRNLP
Sbjct:  200 SEKQRVAKTVIFGGLRDFAMASEVFRLAGEIGTVVSVSYPLPKEEMELHGLERDGCTTDAAAVLFASVKSAWDSVVHLHRKEVKGAVVWARQLGGEGSKIRKWRVIVRNLP 310          
BLAST of GR407754 vs. TrEMBL
Match: Q84T02_ORYSJ (Putative RNA binding ribonucleoprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0087C10.21 PE=4 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.859e-30
Identity = 70/127 (55.12%), Postives = 88/127 (69.29%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGE----------------GAKTQKWKLIVRNLP 343
            SEKQ+VA+TVIFGGL +  MA +V R A +IGTV SV YPL + +++ HGL +DGCT DA+AVL+ SVKSA  SV  LH+KE+ G  VWARQLGGE                G+K +KW++IVRNLP
Sbjct:  200 SEKQRVAKTVIFGGLRDFAMASEVFRLAGEIGTVVSVSYPLPKEEMELHGLERDGCTTDAAAVLFASVKSAWDSVVHLHRKEVKGAVVWARQLGGELFPQLPAVVSNLLAIQGSKIRKWRVIVRNLP 326          
BLAST of GR407754 vs. TrEMBL
Match: A9U4W9_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_201182 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.993e-21
Identity = 59/128 (46.09%), Postives = 75/128 (58.59%), Query Frame = 2
Query:    2 GGGSEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEI-GGGTVWARQLGGE-------------GAKTQKWKLIVRNLP 343
            G  SE Q+ ARTVI G L N  M      +A+ +G V  V++P+   +L   GL +DGC  +A  V YTSVK A  +V  LHK+ + GGG +WARQLGGE             GAK +KW+LIVRNLP
Sbjct:  191 GKASESQRTARTVIIGCLENPKMVQAAIAKAKRLGKVEDVRHPVPEAELISRGLAKDGCKQEAVEVRYTSVKVAHQAVTALHKQNVGGGGAIWARQLGGEILIIFVAIMSVLQGAKLKKWRLIVRNLP 318          
BLAST of GR407754 vs. TAIR peptide
Match: AT2G21440.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:9173712-9179065 REVERSE LENGTH=1003)

HSP 1 Score: 161.77 bits (408), Expect = 7.980e-41
Identity = 75/111 (67.57%), Postives = 95/111 (85.59%), Query Frame = 2
Query:   11 SEKQKVARTVIFGGLINSDMADDVHRQARDIGTVCSVKYPLSRNDLQQHGLLQDGCTLDASAVLYTSVKSARASVATLHKKEIGGGTVWARQLGGEGAKTQKWKLIVRNLP 343
            S+KQ+VARTVIFGGL N++MA+ VH + ++IGTVCSV+YPL + +LQQ+GL QDGC  +ASAVL+TSVKSA A+VA LH+ E+ G  +WARQLGGEG+K QKWKLI+RNLP
Sbjct:  229 SDKQRVARTVIFGGLANAEMAEVVHSRVKEIGTVCSVRYPLPKEELQQNGLTQDGCRAEASAVLFTSVKSACAAVAKLHQTEVKGNLIWARQLGGEGSKAQKWKLIIRNLP 339          
The following BLAST results are available for this feature:
BLAST of GR407754 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7U5K8_VITVI2.782e-4374.56Whole genome shotgun sequence of line PN40024, sca... [more]
B9HRI9_POPTR4.442e-4172.97Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RH99_RICCO4.911e-4071.17RNA-binding protein, putative OS=Ricinus communis ... [more]
Q9SJT4_ARATH2.063e-3867.57Expressed protein OS=Arabidopsis thaliana GN=At2g2... [more]
D7LBD4_ARALY3.520e-3868.47RNA recognition motif-containing protein OS=Arabid... [more]
C5WX23_SORBI5.259e-3463.96Putative uncharacterized protein Sb01g004800 OS=So... [more]
Q10BX7_ORYSJ5.815e-3363.06Os03g0801800 protein OS=Oryza sativa subsp. japoni... [more]
A2XN06_ORYSI5.815e-3363.06Putative uncharacterized protein OS=Oryza sativa s... [more]
Q84T02_ORYSJ7.859e-3055.12Putative RNA binding ribonucleoprotein OS=Oryza sa... [more]
A9U4W9_PHYPA2.993e-2146.09Predicted protein (Fragment) OS=Physcomitrella pat... [more]
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BLAST of GR407754 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G21440.17.980e-4167.57| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR407754 ID=GR407754; Name=GR407754; organism=Cicer arietinum; type=EST; length=343bp
GGGGGGTGGCTCAGAAAAGCAGAAGGTTGCTAGAACTGTTATATTTGGTG
GTCTGATCAATTCTGATATGGCTGATGATGTACACCGCCAAGCCAGAGAT
ATTGGCACTGTGTGTTCTGTAAAGTATCCCCTTTCAAGGAATGATCTTCA
GCAACATGGTCTGCTGCAAGATGGCTGTACATTGGATGCTTCAGCCGTAC
TTTATACGAGTGTAAAATCCGCTCGTGCTTCTGTTGCAACATTGCATAAA
AAAGAGATAGGTGGGGGGACTGTTTGGGCACGCCAACTTGGTGGAGAGGG
CGCCAAGACTCAGAAATGGAAGCTTATTGTCAGAAACCTTCCT
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