GR420999

EST Overview


Name	GR420999
Unique Name	GR420999
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	543

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 6.013e-36
Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            V+E+PA+KVTALRFTE  RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSH+KPYVRAKGRKFEKARGKR SRGF+V
Sbjct:   91 VHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.897e-35
Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            +G +GKI V          VY+VP IKVTAL+FTET RARI+KAGGECLTFDQLALR PL  +  + ++ P++   +VKHFGPAPGVPHSHTKPYVR+KGRKFEKARG+R SRGFRV
Sbjct:   69 QGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL--TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSRGFRV 183

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.648e-35
Identity = 74/98 (75.51%), Postives = 86/98 (87.76%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            V+E+PA+KVTALRFTE  RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHS+TKPYVR KGRKFEKARGKR SRGF+V
Sbjct:   91 VHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 187

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 2.447e-29
Identity = 69/116 (59.48%), Postives = 82/116 (70.69%), Query Frame = 1

Query:   13 GHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            G  GKIAV          + +VPA+ VTALRFTE+ RARI KAGGECLTFDQLAL  P      + ++ P++   +VKHFGPAPGVPHSHTKPYVR  G+K E ARG+R SRGF+V
Sbjct:   73 GKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV 188

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL18_IXOSC (60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.319e-26
Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHCSSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFR 342
            +Y+VP +++ ALR TE  RARI KAGGE LTFDQLA++AP G    +         + +HFGPAPGVPHSHTKPYVR+KGRKFE+ARG+R SR ++
Sbjct:   92 LYDVPKLRLCALRVTERARARILKAGGEILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGRKFERARGRRKSRRYK 187

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL18_TIMBA (60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.656e-25
Identity = 55/96 (57.29%), Postives = 70/96 (72.92%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHCSSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFR 342
            ++E+P + + ALR T+T RA I KAGGE +TFDQLALR+P G    +         +VKHFGPAPGVPHSH KP VR+KGRKFE+ARG+R S G++
Sbjct:   92 IFEIPKLSICALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKGRKFERARGRRRSCGYK 187

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL18_CAEBR (60S ribosomal protein L18 OS=Caenorhabditis briggsae GN=rpl-18 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.095e-24
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHCSSV-KHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFR 342
            +YEVP I + AL  TE  RARI  AGGE +T DQLALR+P G +  + ++ P       KHFGPAPGVPHSHTKP+VR+KGRKFE+ARG+R SR ++
Sbjct:   92 LYEVPKISLAALHVTEGARARILAAGGEIITLDQLALRSPKGEN-TVFLQGPRSAREAEKHFGPAPGVPHSHTKPHVRSKGRKFERARGRRASRAYK 187

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL18_CAEEL (60S ribosomal protein L18 OS=Caenorhabditis elegans GN=rpl-18 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.042e-24
Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHCSSV-KHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFR 342
            +Y VP I V AL  TE  RARI  AGGE +T DQLAL++P G +  + ++ P       KHFGPAPGVPHSHTKPYVR+KGRKFE+ARG+R SR ++
Sbjct:   92 LYTVPKISVAALHVTEGARARILAAGGEIITLDQLALKSPKGEN-TVFLQGPRSAREAEKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRASRAYK 187

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL18_LYSTE (60S ribosomal protein L18 OS=Lysiphlebus testaceipes GN=RpL18 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.280e-24
Identity = 54/96 (56.25%), Postives = 69/96 (71.88%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHCSSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFR 342
            ++E+P +KV ALR TE  R RI KAGGE +TF++LA  +P G    +         +VKHFGPAPGVPHSHTKP VR+KGRKFE+ARG+R S G++
Sbjct:   92 IFEIPKLKVCALRITEKARGRILKAGGEIITFEKLAEISPTGNKTVLMQGRRNAREAVKHFGPAPGVPHSHTKPLVRSKGRKFERARGRRKSCGYK 187

[Close]

BLAST of GR420999 vs. SwissProt
Match: RL18_DROME (60S ribosomal protein L18 OS=Drosophila melanogaster GN=RpL18 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 6.895e-24
Identity = 55/93 (59.14%), Postives = 69/93 (74.19%), Query Frame = 1

Query:   64 VPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHCSSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFR 342
            VP + V AL  T+T R RI KAGGE LTFDQLALR+P G +  +        ++ KHFG APGVPHSHT+PYVR+KGRKFE+ARG+R+S G++
Sbjct:   95 VPKLTVCALHVTQTARERILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKGRKFERARGRRSSCGYK 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: B9I7B8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570762 PE=4 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.484e-38
Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG +GKIAV          VYEVP +KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNS+GFRV
Sbjct:   72 KGKEGKIAVVVGTVTDDIRVYEVPTLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSKGFRV 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: A9PBR7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572675 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.550e-38
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG +GKIAV          VYEVPA+KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKPY+R+KGRKFEKARGKRNS+GFRV
Sbjct:   72 KGKEGKIAVVVGTITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYIRSKGRKFEKARGKRNSKGFRV 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: C6SWN7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.762e-38
Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG + KIAV          VYEVPA+KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKPYVRAKGRKFE+ARGKRNSRGFRV
Sbjct:   72 KGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGKRNSRGFRV 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: A9PAJ5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_581899 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.762e-38
Identity = 86/117 (73.50%), Postives = 96/117 (82.05%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG + KIAV          VYEVPA+KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKP+VRAKGRKFEKARGKRNSRGFRV
Sbjct:   72 KGKEDKIAVLVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPFVRAKGRKFEKARGKRNSRGFRV 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: D4P866_LINUS (Putative ribosomal protein L18 (Fragment) OS=Linum usitatissimum PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.014e-37
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG +GKIAV          VY+VPA+KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKPYVR+KGRKFEKARG+RNSRGFRV
Sbjct:   39 KGKEGKIAVVVGTITDDIRVYDVPAMKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFRV 154

[Close]

BLAST of GR420999 vs. TrEMBL
Match: A9P8I5_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.014e-37
Identity = 85/117 (72.65%), Postives = 95/117 (81.20%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG +GKIAV          VYEVP +KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPH HTKPYVRAKGRKFEKARGKRNS+GFRV
Sbjct:   72 KGKEGKIAVVVGTVTDDIRVYEVPTLKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHGHTKPYVRAKGRKFEKARGKRNSKGFRV 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: B9SAT7_RICCO (60S ribosomal protein L18, putative OS=Ricinus communis GN=RCOM_1178700 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.324e-37
Identity = 85/117 (72.65%), Postives = 96/117 (82.05%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG + KIAV          VYEVPA+KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKPYVRAKGRKFE+ARG+RNSRGFRV
Sbjct:   72 KGKENKIAVIVGTVTDDVRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: C6T0R5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.258e-37
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1

Query:   10 KGHKGKIAVR----WELTIVYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG + KIAV      +   VYEVPA+KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKPYVRAKGRKFE+ARG+RNSRGFRV
Sbjct:   72 KGKEDKIAVVVGNITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: B9GSC1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552462 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.949e-37
Identity = 84/117 (71.79%), Postives = 96/117 (82.05%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG + KIAV          VYEVPA+KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKPY+R+KGRKFEKARGKRNS+GFRV
Sbjct:   72 KGKEDKIAVVVGTITDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYIRSKGRKFEKARGKRNSKGFRV 187

[Close]

BLAST of GR420999 vs. TrEMBL
Match: C6SYU5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.852e-37
Identity = 84/117 (71.79%), Postives = 96/117 (82.05%), Query Frame = 1

Query:   10 KGHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            KG + KIAV          VYEVPA+KVTALRFTET RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSHTKPYVRAKGRKFE+ARG++NSRGFRV
Sbjct:   72 KGKEDKIAVVVGAVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRKNSRGFRV 187

[Close]

BLAST of GR420999 vs. TAIR peptide
Match: AT3G05590.1 (| Symbols: RPL18 | ribosomal protein L18 | chr3:1621511-1622775 FORWARD LENGTH=187)

HSP 1 Score: 150.214 bits (378), Expect = 6.516e-37
Identity = 75/98 (76.53%), Postives = 87/98 (88.78%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            V+E+PA+KVTALRFTE  RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHSH+KPYVRAKGRKFEKARGKR SRGF+V
Sbjct:   91 VHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKRKSRGFKV 187

[Close]

BLAST of GR420999 vs. TAIR peptide
Match: AT5G27850.1 (| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr5:9873169-9874297 FORWARD LENGTH=187)

HSP 1 Score: 146.747 bits (369), Expect = 7.204e-36
Identity = 74/98 (75.51%), Postives = 86/98 (87.76%), Query Frame = 1

Query:   55 VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            V+E+PA+KVTALRFTE  RARIEKAGGECLTFDQLALRAPLG +  + ++ P++   +VKHFGPAPGVPHS+TKPYVR KGRKFEKARGKR SRGF+V
Sbjct:   91 VHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQN-TVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKRKSRGFKV 187

[Close]

BLAST of GR420999 vs. TAIR peptide
Match: AT2G47570.2 (| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr2:19515898-19516717 REVERSE LENGTH=135)

HSP 1 Score: 128.257 bits (321), Expect = 2.652e-30
Identity = 69/116 (59.48%), Postives = 82/116 (70.69%), Query Frame = 1

Query:   13 GHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            G  GKIAV          + +VPA+ VTALRFTE+ RARI KAGGECLTFDQLAL  P      + ++ P++   +VKHFGPAPGVPHSHTKPYVR  G+K E ARG+R SRGF+V
Sbjct:   20 GKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV 135

[Close]

BLAST of GR420999 vs. TAIR peptide
Match: AT2G47570.1 (| Symbols: | Ribosomal protein L18e/L15 superfamily protein | chr2:19515898-19516717 REVERSE LENGTH=135)

HSP 1 Score: 128.257 bits (321), Expect = 2.652e-30
Identity = 69/116 (59.48%), Postives = 82/116 (70.69%), Query Frame = 1

Query:   13 GHKGKIAVRWELTI----VYEVPAIKVTALRFTETVRARIEKAGGECLTFDQLALRAPLG*S*RMPVKAPEHC-SSVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 345
            G  GKIAV          + +VPA+ VTALRFTE+ RARI KAGGECLTFDQLAL  P      + ++ P++   +VKHFGPAPGVPHSHTKPYVR  G+K E ARG+R SRGF+V
Sbjct:   20 GKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGRRRSRGFKV 135

The following BLAST results are available for this feature:

BLAST of GR420999 vs. SwissProt
BLAST of GR420999 vs. TrEMBL
BLAST of GR420999 vs. TAIR peptide

BLAST of GR420999 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL182_ARATH	6.013e-36	76.53	60S ribosomal protein L18-2 OS=Arabidopsis thalian...	[more]
RL18_CICAR	3.897e-35	66.67	60S ribosomal protein L18 (Fragment) OS=Cicer arie...	[more]
RL183_ARATH	6.648e-35	75.51	60S ribosomal protein L18-3 OS=Arabidopsis thalian...	[more]
RL181_ARATH	2.447e-29	59.48	Putative 60S ribosomal protein L18-1 OS=Arabidopsi...	[more]
RL18_IXOSC	4.319e-26	59.38	60S ribosomal protein L18 OS=Ixodes scapularis GN=...	[more]
RL18_TIMBA	3.656e-25	57.29	60S ribosomal protein L18 OS=Timarcha balearica GN...	[more]
RL18_CAEBR	3.095e-24	58.76	60S ribosomal protein L18 OS=Caenorhabditis briggs...	[more]
RL18_CAEEL	4.042e-24	58.76	60S ribosomal protein L18 OS=Caenorhabditis elegan...	[more]
RL18_LYSTE	5.280e-24	56.25	60S ribosomal protein L18 OS=Lysiphlebus testaceip...	[more]
RL18_DROME	6.895e-24	59.14	60S ribosomal protein L18 OS=Drosophila melanogast...	[more]

BLAST of GR420999 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9I7B8_POPTR	3.484e-38	73.50	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PBR7_POPTR	4.550e-38	72.65	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6SWN7_SOYBN	7.762e-38	73.50	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PAJ5_POPTR	7.762e-38	73.50	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D4P866_LINUS	1.014e-37	72.65	Putative ribosomal protein L18 (Fragment) OS=Linum...	[more]
A9P8I5_POPTR	1.014e-37	72.65	Putative uncharacterized protein OS=Populus tricho...	[more]
B9SAT7_RICCO	1.324e-37	72.65	60S ribosomal protein L18, putative OS=Ricinus com...	[more]
C6T0R5_SOYBN	2.258e-37	72.65	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9GSC1_POPTR	2.949e-37	71.79	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6SYU5_SOYBN	3.852e-37	71.79	Putative uncharacterized protein OS=Glycine max PE...	[more]

BLAST of GR420999 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G05590.1	6.516e-37	76.53	\| Symbols: RPL18 \| ribosomal protein L18 \| chr3:16...	[more]
AT5G27850.1	7.204e-36	75.51	\| Symbols: \| Ribosomal protein L18e/L15 superfami...	[more]
AT2G47570.2	2.652e-30	59.48	\| Symbols: \| Ribosomal protein L18e/L15 superfami...	[more]
AT2G47570.1	2.652e-30	59.48	\| Symbols: \| Ribosomal protein L18e/L15 superfami...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 19..60 score: 1.1
IPR000039	Ribosomal protein L18e	PANTHER	PTHR10934	60S RIBOSOMAL PROTEIN L18	coord: 12..52 score: 2
IPR021131	Ribosomal protein L18e/L15	PFAM	PF00828	Ribosomal_L18e	coord: 21..50 score: 1.9
IPR021131	Ribosomal protein L18e/L15	SUPERFAMILY	52080	Ribosomal proteins L15p and L18e	coord: 23..58 score: 5.3
None	No IPR available	GENE3D	3.100.10.10	no description	coord: 24..58 score: 7.6
None	No IPR available	SEG	seg	seg	coord: 19..32 score: NAcoord: 40..55 score
None	No IPR available	SEG	seg	seg	coord: 15..28 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR420999 ID=GR420999; Name=GR420999; organism=Cicer arietinum; type=EST; length=543bp
GGTGGTGGGAAGGGCCATAAAGGTAAGATTGCTGTCCGTTGGGAACTGAC
GATAGTTTATGAAGTTCCAGCCATAAAGGTTACAGCACTCAGGTTTACAG
AGACCGTTAGGGCAAGAATCGAAAAGGCTGGCGGTGAATGCTTGACTTTT
GATCAGTTGGCTCTCAGGGCCCCTCTTGGATAGAGCTAAAGAATGCCCGT
GAAGGCCCCAGAACACTGTTCTTCTGTGAAGCACTTTGGTCCTGCTCCTG
GTGTGCCACACAGCCACACAAAGCCTTATGTTAGAGCCAAGGGAAGGAAG
TTCGAGAAGGCCAGAGGAAAGAGGAACAGCAGAGGATTCAGAGTTTGATG
TGATCATATTACTTCTTCATGATAATTTGCTGGTATTGTTAGATTTTTCC
TATATCTAGACAGTGTTGCTATTTATGTTAATGATTTTCAATATGGAGTT
TACTCCCCACCTTCTTATTTTCCGTGGAATATGTTACATGTTTTGTGTAT
TCAGTTTTGATTTTATTGTTATTTACATGAGAGAATGGTAATT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR000039	Ribosomal_eL18
IPR021131	Ribosomal_uL15/eL18

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