HO062276

EST Overview
NameHO062276
Unique NameHO062276
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length529
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062276 vs. TrEMBL
Match: B9I9R2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572689 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.017e-28
Identity = 62/96 (64.58%), Postives = 75/96 (78.12%), Query Frame = -2
Query:  235 GPYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADYSRT 522
            GPYDA ++GLTG+A+ASFVA ++  FG QCGLVAGVF+ T CG+++YRRQNDWVN LI          A +RSWTQV+GMAGLVSAF  AADYS+T
Sbjct:   34 GPYDARKRGLTGVAQASFVAKTIGKFGFQCGLVAGVFTATCCGIQRYRRQNDWVNPLIAGAVAGAAVAAGTRSWTQVVGMAGLVSAFSVAADYSKT 129          
BLAST of HO062276 vs. TrEMBL
Match: B9SAS0_RICCO (Protein translocase, putative OS=Ricinus communis GN=RCOM_1178330 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.624e-26
Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = -2
Query:  235 GPYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADYSRT 522
            GP++A ++GLTG ++ASFVA SV  F  QCGLVAGVF+ T CG+++YRR+NDWVN LI          A +R+WTQV+GMAGLVSAF  AADYS+T
Sbjct:   34 GPHNARKRGLTGASQASFVAKSVGKFSFQCGLVAGVFTFTHCGIRRYRRKNDWVNALIAGAVAGAAVAAGTRNWTQVVGMAGLVSAFSVAADYSKT 129          
BLAST of HO062276 vs. TrEMBL
Match: D7U298_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028017001 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.986e-24
Identity = 58/92 (63.04%), Postives = 68/92 (73.91%), Query Frame = -2
Query:  244 PYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADY 519
            PYDA ++GLTG++R +FVA SV     QCGLVAGVFS TRC V+++RRQNDWVNG I          AR+RSW QV+GMAGLVSA  AAADY
Sbjct:   35 PYDASKKGLTGLSRTAFVAKSVGKISFQCGLVAGVFSGTRCVVQRHRRQNDWVNGFIAGAVAGATVAARTRSWKQVVGMAGLVSACSAAADY 126          
BLAST of HO062276 vs. TrEMBL
Match: Q9LZH8_ARATH (Putative uncharacterized protein At3g62880 OS=Arabidopsis thaliana GN=F26K9_310 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.891e-23
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = -2
Query:  235 GPYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADYSRT 522
            GP DA + GL+G+++ASFVA S+  FG QCGLV+GVF++T CG+++YR +NDWVN L+            +R+WTQV+GMAGLVSAF   A+ +RT
Sbjct:   34 GPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLANCTRT 129          
BLAST of HO062276 vs. TrEMBL
Match: D7LTA7_ARALY (Atoep16-4 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486794 PE=4 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.090e-22
Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = -2
Query:  235 GPYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADYSRT 522
            GP DA + GL+G+++AS+VA S+  FG QCGLV+GVF++T CG+++YR +NDWVN L+            +R+WTQV+GMAGLVSAF   A+ +RT
Sbjct:   34 GPRDARKIGLSGVSQASYVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLANCTRT 129          
BLAST of HO062276 vs. TrEMBL
Match: A9NYH8_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.995e-8
Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = -2
Query:  244 GPYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADY 522
            GPY+  +    G  RA  VA  V   G QCG  AG+++   CG+++YRR+ DWVN  I          AR+R+  Q+ G+A   SA   + +Y
Sbjct:   40 GPYEVTKVS-QGSTRAILVAKLVGKCGLQCGSFAGIYTAFSCGIERYRRKKDWVNASIAGATTGAIIAARTRNVRQICGLAIQFSALTTSLEY 131          
BLAST of HO062276 vs. TrEMBL
Match: A9TZ45_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172788 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.605e-8
Identity = 35/95 (36.84%), Postives = 50/95 (52.63%), Query Frame = -2
Query:  238 GPYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADYSR 522
            G YDA ++G  G +RA +VA S+   G   G  AG +    CGV+  R + DWVN  I          AR+ + T+++G + LVSA   A D+ R
Sbjct:   43 GSYDAVKEGHLGASRALYVAKSITRNGLGWGCFAGAYLGLNCGVESVRNKKDWVNASISGAITGAFVSARTGNVTKMLGTSVLVSAIATAGDFLR 137          
BLAST of HO062276 vs. TAIR peptide
Match: AT3G62880.2 (| Symbols: ATOEP16-4 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr3:23245103-23246002 REVERSE LENGTH=136)

HSP 1 Score: 110.923 bits (276), Expect = 4.129e-25
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = -2
Query:  235 GPYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADYSRT 522
            GP DA + GL+G+++ASFVA S+  FG QCGLV+GVF++T CG+++YR +NDWVN L+            +R+WTQV+GMAGLVSAF   A+ +RT
Sbjct:   34 GPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLANCTRT 129          
BLAST of HO062276 vs. TAIR peptide
Match: AT3G62880.1 (| Symbols: ATOEP16-4 | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr3:23245103-23246002 REVERSE LENGTH=136)

HSP 1 Score: 110.923 bits (276), Expect = 4.129e-25
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = -2
Query:  235 GPYDAHRQGLTGIARASFVANSVRVFGTQCGLVAGVFSITRCGVKKYRRQNDWVNGLIXXXXXXXXXXARSRSWTQVIGMAGLVSAFCAAADYSRT 522
            GP DA + GL+G+++ASFVA S+  FG QCGLV+GVF++T CG+++YR +NDWVN L+            +R+WTQV+GMAGLVSAF   A+ +RT
Sbjct:   34 GPRDARKIGLSGVSQASFVAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAFSVLANCTRT 129          
The following BLAST results are available for this feature:
BLAST of HO062276 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9I9R2_POPTR1.017e-2864.58Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SAS0_RICCO1.624e-2660.42Protein translocase, putative OS=Ricinus communis ... [more]
D7U298_VITVI1.986e-2463.04Whole genome shotgun sequence of line PN40024, sca... [more]
Q9LZH8_ARATH4.891e-2353.13Putative uncharacterized protein At3g62880 OS=Arab... [more]
D7LTA7_ARALY1.090e-2252.08Atoep16-4 OS=Arabidopsis lyrata subsp. lyrata GN=A... [more]
A9NYH8_PICSI1.995e-836.56Putative uncharacterized protein OS=Picea sitchens... [more]
A9TZ45_PHYPA2.605e-836.84Predicted protein OS=Physcomitrella patens subsp. ... [more]
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BLAST of HO062276 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G62880.24.129e-2553.13| Symbols: ATOEP16-4 | Mitochondrial import inner ... [more]
AT3G62880.14.129e-2553.13| Symbols: ATOEP16-4 | Mitochondrial import inner ... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..13
score
NoneNo IPR availableSEGsegsegcoord: 24..34
score
NoneNo IPR availablePANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 33..95
score: 1.5
NoneNo IPR availableSEGsegsegcoord: 61..71
score
IPR003397Mitochondrial inner membrane translocase complex, subunit Tim17/22PFAMPF02466Tim17coord: 21..95
score: 2.9

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062276 ID=HO062276; Name=HO062276; organism=Cicer arietinum; type=EST; length=529bp
AGACTATGAAAAACTGTTATTACTTCAAGTATAAGGAAGAACAATTTTGT
GTAGGAAGAACCAGGCTGAAATTACTCTATCGTCTAAACAAATATGGTAT
ATACAAACGCATGTTGTAGACAACAAAATATACAATAGTTGAAAACTGCC
AAATAGCAGACAATTTTGCTCGTTGATGTAAGACACTTGTGAGTCTCATA
TCCTTCTGTCATAGTTTCTAACAAATGCACCTTATGTTCTGGAATAGTCA
GCTGCAGCACAAAAAGCAGAAACCAAACCGGCCATCCCAATCACCTGCGT
CCAACTTCGTGACCTAGCAGCAACAGCTGCACCTGCTACAGCTCCTCCAA
TCAAACCATTGACCCAATCATTCTGTCTCCTGTATTTCTTAACTCCGCAG
CGTGTAATGCTGAAAACTCCAGCTACAAGTCCGCATTGAGTCCCAAACAC
ACGAACCGAGTTTGCCACAAAAGAAGCTCGAGCAATGCCTGTAAGACCCT
GTCTATGAGCATCGTAGGGACCAGTACCT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008565obsolete protein transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR003397Tim17/Tim22/Tim23/PMP24