HO062539

EST Overview
NameHO062539
Unique NameHO062539
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length304
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of HO062539 vs. TAIR peptide
Match: AT2G29380.1 (| Symbols: HAI3 | highly ABA-induced PP2C gene 3 | chr2:12608855-12610124 FORWARD LENGTH=362)

HSP 1 Score: 41.2022 bits (95), Expect = 3.337e-7
Identity = 18/22 (81.82%), Postives = 20/22 (90.91%), Query Frame = 1 
Query:   37 TERKDK*CLILASDGLWDVVSN 102
            T+R+D  CLILASDGLWDVVSN
Sbjct:  282 TDRRDDDCLILASDGLWDVVSN 303

HSP 2 Score: 24.6386 bits (52), Expect = 3.337e-7
Identity = 9/13 (69.23%), Postives = 13/13 (100.00%), Query Frame = 2 
Query:  191 SDRACSDASILLT 229
            SD+AC++AS+LLT
Sbjct:  329 SDKACTEASVLLT 341

HSP 3 Score: 22.7126 bits (47), Expect = 3.337e-7
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 3 
Query:  105 TACGVVRMCLK 137
            TAC V RMCL+
Sbjct:  305 TACSVARMCLR 315
The following BLAST results are available for this feature:
BLAST of HO062539 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G29380.13.337e-781.82| Symbols: HAI3 | highly ABA-induced PP2C gene 3 |... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 23..35
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062539 ID=HO062539; Name=HO062539; organism=Cicer arietinum; type=EST; length=304bp
ATCAAAGCCGATGTGATTTCGAACCTGAGGTGACGTACTGAACGGAAGGA
CAAATGATGTTTGATATTAGCGAGTGATGGTTTATGGGATGTTGTTTCAA
ACACACCGCATGTGGTGTAGTGAGGATGTGTCTGAAGGCTCAAACCCGTC
TCCGCCGGGGTCTCCCGGTAACAACACTGACACTGACGGTTCTGATCGGG
CATGTTCTGATGCGTCCATTCTGTTGACTAATGGCGTGGCAACATATTCG
GATATGTTAGCGGGTGGTCATTGATTTAAGGAAGATCCACATCATTCAAT
TTCC
back to top