HO066500

EST Overview
NameHO066500
Unique NameHO066500
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length352
Libraries
Library NameType
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
InterProScan analysis for Cicer arietinum unigene v12010-12-29
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 20..29
score: NAcoord: 35..50
score
NoneNo IPR availableSEGsegsegcoord: 14..26
score: NAcoord: 29..44
score
NoneNo IPR availableSEGsegsegcoord: 1..12
score: NAcoord: 16..30
score
IPR000894Ribulose bisphosphate carboxylase, small chainGENE3D3.30.190.10no descriptioncoord: 12..58
score: 1.8
IPR000894Ribulose bisphosphate carboxylase, small chainPFAMPF00101RuBisCO_smallcoord: 10..56
score: 3.1
IPR000894Ribulose bisphosphate carboxylase, small chainSUPERFAMILY55239RuBisCO, small subunitcoord: 12..59
score: 3.4

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO066500 ID=HO066500; Name=HO066500; organism=Cicer arietinum; type=EST; length=352bp
GAATAAAAGGACCATTTCATTTATTNACTCTTATCCATCCATTTGCNTTT
GAAGTCCGAAAGTAAANACCGAAAAAACAAAGGAAGACATTCCTTTGNAN
AANAAAAGGAAATTACAAGCNTAACAAATGGGAGAAAATAANTGATTCTT
CCAAGAGAGTTAATACTCAAACTTAGAACTCTTTAGGTGTGTGNGCAATG
AAACTGANGCNCTGCACTTGGNGNACGTTGNCNAANCCGATGATGCGGAC
GAAAGNNTTAGGGTNAGCCTTGACNACTTCCTGAANTTCCTTCNACACTT
GAACAGCCTCAGTGCAACCCCGCGTACCTGCCCGGGCGGCCGCTCGAAAT
CG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0015977carbon fixation
Vocabulary: Molecular Function
TermDefinition
GO:0016984ribulose-bisphosphate carboxylase activity
Vocabulary: INTERPRO
TermDefinition
IPR024681RuBisCO_ssu