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EST Overview
Name | HO066500 |
Unique Name | HO066500 |
Type | EST |
Organism | Cicer arietinum (chickpea) |
Sequence length | 352 |
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | SEG | seg | seg | coord: 20..29 score: NAcoord: 35..50 score |
None | No IPR available | SEG | seg | seg | coord: 14..26 score: NAcoord: 29..44 score |
None | No IPR available | SEG | seg | seg | coord: 1..12 score: NAcoord: 16..30 score |
IPR000894 | Ribulose bisphosphate carboxylase, small chain | GENE3D | 3.30.190.10 | no description | coord: 12..58 score: 1.8 |
IPR000894 | Ribulose bisphosphate carboxylase, small chain | PFAM | PF00101 | RuBisCO_small | coord: 10..56 score: 3.1 |
IPR000894 | Ribulose bisphosphate carboxylase, small chain | SUPERFAMILY | 55239 | RuBisCO, small subunit | coord: 12..59 score: 3.4 |
Properties
Property Name | Value |
Singlet in analysis | Cicer arietinum unigene v1 |
Sequences
The
following sequences are available for this feature:
EST sequence >HO066500 ID=HO066500; Name=HO066500; organism=Cicer arietinum; type=EST; length=352bp GAATAAAAGGACCATTTCATTTATTNACTCTTATCCATCCATTTGCNTTT GAAGTCCGAAAGTAAANACCGAAAAAACAAAGGAAGACATTCCTTTGNAN AANAAAAGGAAATTACAAGCNTAACAAATGGGAGAAAATAANTGATTCTT CCAAGAGAGTTAATACTCAAACTTAGAACTCTTTAGGTGTGTGNGCAATG AAACTGANGCNCTGCACTTGGNGNACGTTGNCNAANCCGATGATGCGGAC GAAAGNNTTAGGGTNAGCCTTGACNACTTCCTGAANTTCCTTCNACACTT GAACAGCCTCAGTGCAACCCCGCGTACCTGCCCGGGCGGCCGCTCGAAAT CG back to top
Annotated Terms
The
following terms have been associated with
this EST:
Vocabulary: Biological Process
Term | Definition |
GO:0015977 | carbon fixation |
Vocabulary: Molecular Function
Term | Definition |
GO:0016984 | ribulose-bisphosphate carboxylase activity |
Vocabulary: INTERPRO
Term | Definition |
IPR024681 | RuBisCO_ssu |
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