DY475091

EST Overview
NameDY475091
Unique NameDY475091
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length255
Libraries
Library NameType
LIBEST_016683 Chickpea (ICC3996) post-inoculation EST librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of DY475091 vs. TrEMBL
Match: B9SKG6_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0658760 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.322e-13
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = -3
Query:  101 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVCGGLTEXSA-HSEVQS 253
            G +IRV PC HEY +SCVDKWLKEI GVCPLCRG+VC G+ E SA  SE+ S
Sbjct:  432 GDEIRVLPCSHEYHVSCVDKWLKEIHGVCPLCRGDVCKGVVESSALDSEILS 483          
BLAST of DY475091 vs. TrEMBL
Match: D7T512_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_118.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012888001 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.757e-12
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = -3
Query:  122 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVCGGLTEXS 253
            G +IRV PC HEY MSCVDKWLKEI GVCPLCRG+V  GLT  S
Sbjct:  128 GDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREGLTGGS 171          
BLAST of DY475091 vs. TrEMBL
Match: A5BCM9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024970 PE=4 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.757e-12
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = -3
Query:  122 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVCGGLTEXS 253
            G +IRV PC HEY MSCVDKWLKEI GVCPLCRG+V  GLT  S
Sbjct:  490 GDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREGLTGGS 533          
BLAST of DY475091 vs. TrEMBL
Match: B9GP91_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644272 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.274e-11
Identity = 32/45 (71.11%), Postives = 33/45 (73.33%), Query Frame = -3
Query:  119 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVCGGLTEXSA 253
            G +IRV PC HEY MSCVDKWLKEI GVCPLCR  VC G  E  A
Sbjct:  321 GDKIRVLPCSHEYHMSCVDKWLKEIHGVCPLCRDGVCKGNVESPA 365          
BLAST of DY475091 vs. TrEMBL
Match: B9MV32_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_826712 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.174e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = -3
Query:  119 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVCGGLTEXSA 253
            G +IRV PC HE+ M+CVDKWLK+I GVCPLCR +VC G  E SA
Sbjct:  385 GDKIRVLPCSHEFHMACVDKWLKDIHGVCPLCRDDVCKGTAESSA 429          
BLAST of DY475091 vs. TrEMBL
Match: B9HAD8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_762855 PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.842e-11
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = -3
Query:  122 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVCGGLTEXS 253
            G +IRV PC HEY M+CVDKWLKEI GVCPLCRG+V  G  E S
Sbjct:  483 GDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDVREGANEPS 526          
BLAST of DY475091 vs. TrEMBL
Match: D5A9N9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.260e-11
Identity = 29/37 (78.38%), Postives = 31/37 (83.78%), Query Frame = -3
Query:  143 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVC 253
            G +IRV PC HEY M+CVDKWLKEI  VCPLCRGNVC
Sbjct:  493 GDKIRVLPCHHEYHMACVDKWLKEIHRVCPLCRGNVC 529          
BLAST of DY475091 vs. TrEMBL
Match: B9T2M9_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0509910 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.079e-10
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = -3
Query:  122 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVCGGLTEXS 253
            G +IRV PC HEY M+CVDKWLKEI GVCPLCRG+V  G  + S
Sbjct:  491 GDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDVRQGTNDHS 534          
BLAST of DY475091 vs. TrEMBL
Match: C4J6C2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.403e-10
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = -3
Query:  143 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVC 253
            G QIR+ PCKHE+ + CVDKWLKEI  VCPLCRG+VC
Sbjct:  465 GDQIRILPCKHEFHLQCVDKWLKEIHRVCPLCRGDVC 501          
BLAST of DY475091 vs. TrEMBL
Match: B9IMK6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_578817 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.403e-10
Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = -3
Query:  122 GXQIRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVC-GGLTEXS 253
            G +IRV PC HEY M CVDKWLKEI GVCPLCRG+V  GG +E S
Sbjct:  135 GDKIRVLPCHHEYHMVCVDKWLKEIHGVCPLCRGDVREGGASEPS 179          
BLAST of DY475091 vs. TAIR peptide
Match: AT5G45290.1 (| Symbols: | RING/U-box superfamily protein | chr5:18350011-18352092 REVERSE LENGTH=545)

HSP 1 Score: 60.077 bits (144), Expect = 3.322e-10
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = -3
Query:  143 IRVXPCKHEYXMSCVDKWLKEIPGVCPLCRGNVC 244
            IR  PC HE+  +CVDKWLKEI  VCPLCRG++C
Sbjct:  503 IRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDIC 536          
BLAST of DY475091 vs. TAIR peptide
Match: AT5G45290.2 (| Symbols: | RING/U-box superfamily protein | chr5:18350011-18352092 REVERSE LENGTH=546)

HSP 1 Score: 56.225 bits (134), Expect = 4.797e-9
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = -3
Query:  143 IRVXPCKHEYXMSCVDKWLKEIPG-VCPLCRGNVC 244
            IR  PC HE+  +CVDKWLKEI   VCPLCRG++C
Sbjct:  503 IRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDIC 537          
The following BLAST results are available for this feature:
BLAST of DY475091 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SKG6_RICCO2.322e-1369.23Ring finger protein, putative OS=Ricinus communis ... [more]
D7T512_VITVI9.757e-1275.00Whole genome shotgun sequence of line PN40024, sca... [more]
A5BCM9_VITVI9.757e-1275.00Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GP91_POPTR1.274e-1171.11Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9MV32_POPTR2.174e-1166.67Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HAD8_POPTR4.842e-1170.45Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D5A9N9_PICSI8.260e-1178.38Putative uncharacterized protein OS=Picea sitchens... [more]
B9T2M9_RICCO1.079e-1068.18Ring finger protein, putative OS=Ricinus communis ... [more]
C4J6C2_MAIZE2.403e-1072.97Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B9IMK6_POPTR2.403e-1071.11Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of DY475091 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G45290.13.322e-1067.65| Symbols: | RING/U-box superfamily protein | chr... [more]
AT5G45290.24.797e-965.71| Symbols: | RING/U-box superfamily protein | chr... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 35..47
score
NoneNo IPR availablePANTHERPTHR14155RING FINGER PROTEIN 6/12/38coord: 4..32
score: 5.6
NoneNo IPR availablePANTHERPTHR14155:SF2RING FINGER PROTEIN 38coord: 4..32
score: 5.6
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..36
score: 2.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10no descriptioncoord: 3..36
score: 1.9

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DY475091 ID=DY475091; Name=DY475091; organism=Cicer arietinum; type=EST; length=255bp
TTTGGGAGGAACAAATTGATGGGGAGTGTAGTATGTANAAGGNGTAAATT
GAAGTTTGGCCTAAATTTAAACTATTTATGTACAATGGACAATATCNCTG
AGACTGCACTTCTGAGTGNGCTGACNACTCTGTTAACCCTCCACAAACAT
TGCCACGACACAGAGGACATACNCCGGGTATTTCCTTCAGCCACTTATCG
ACGCACGACATGNGATATTCATGCTTGCAAGGAANAACTCGTATTTGGNC
CCCAT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD