FE671684

EST Overview
NameFE671684
Unique NameFE671684
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length250
Libraries
Library NameType
LIBEST_022820 Drought-stressed chickpea leave librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of FE671684 vs. SwissProt
Match: RR17_PEA (30S ribosomal protein S17, chloroplastic (Fragment) OS=Pisum sativum GN=RPS17 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.670e-10
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 2
Query:  134 QTHSLPLPSIKAMKTMEGKVVCSTNDKTVAVEVVRLPPH 250
            QT SLP P+IKAMKTMEGKVVC++ +KTVAVEV RL PH
Sbjct:   26 QTRSLPFPAIKAMKTMEGKVVCASGNKTVAVEVTRLAPH 64          
BLAST of FE671684 vs. SwissProt
Match: RR17_ARATH (30S ribosomal protein S17, chloroplastic OS=Arabidopsis thaliana GN=RPS17 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.041e-8
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 2
Query:  110 PTSSLPVAQT---HSLP--LPSIKAMKTMEGKVVCSTNDKTVAVEVVRLPPH 250
            P SSL    +   H +P  +P I+AMKTM+G+VVC+T+DKTVAVEVVRL PH
Sbjct:   25 PLSSLSKPNSFPNHRMPALVPVIRAMKTMQGRVVCATSDKTVAVEVVRLAPH 76          
BLAST of FE671684 vs. TrEMBL
Match: B7FMT1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.754e-14
Identity = 47/75 (62.67%), Postives = 52/75 (69.33%), Query Frame = 2
Query:   26 LLQLPSNLSTPFXXXXXXXXXXXXXXXKPTSSLPVAQTHSLPLPSIKAMKTMEGKVVCSTNDKTVAVEVVRLPPH 250
            LLQLPS LSTPF               KPTS+L ++Q  SLP  SIKAMKTMEGKVVC+TNDKTV+VEV RL PH
Sbjct:    3 LLQLPSTLSTPFLNGNNGVALTRLS--KPTSTLSLSQPQSLP--SIKAMKTMEGKVVCATNDKTVSVEVTRLAPH 73          
BLAST of FE671684 vs. TrEMBL
Match: B9GG36_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_705737 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.463e-7
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 2
Query:  107 KPTSSLPVAQTHSLP-LPSIKAMKTMEGKVVCSTNDKTVAVEVVRLPPH 250
            KPTSSL +        LP I+AMK+++GKVVC+T+DKTVAVEV RL PH
Sbjct:   32 KPTSSLTLRPAKPFTFLPPIRAMKSLQGKVVCATSDKTVAVEVTRLAPH 80          
BLAST of FE671684 vs. TrEMBL
Match: B9RQK5_RICCO (30S ribosomal protein S17, putative OS=Ricinus communis GN=RCOM_1493770 PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.260e-7
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 2
Query:  107 KPTSSLPVAQTHSLP-LPSIKAMKTMEGKVVCSTNDKTVAVEVVRLPPH 250
            KPTSSL +   +    +P ++AMK+++G+VVC+TNDKTV+VEV RL PH
Sbjct:   28 KPTSSLSLQHPNPFSFMPPVRAMKSIQGRVVCATNDKTVSVEVTRLAPH 76          
BLAST of FE671684 vs. TAIR peptide
Match: AT1G79850.1 (| Symbols: RPS17, CS17, PRPS17 | ribosomal protein S17 | chr1:30041473-30041922 REVERSE LENGTH=149)

HSP 1 Score: 57.7658 bits (138), Expect = 1.653e-9
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 2
Query:  110 PTSSLPVAQT---HSLP--LPSIKAMKTMEGKVVCSTNDKTVAVEVVRLPPH 250
            P SSL    +   H +P  +P I+AMKTM+G+VVC+T+DKTVAVEVVRL PH
Sbjct:   25 PLSSLSKPNSFPNHRMPALVPVIRAMKTMQGRVVCATSDKTVAVEVVRLAPH 76          
The following BLAST results are available for this feature:
BLAST of FE671684 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
RR17_PEA1.670e-1076.9230S ribosomal protein S17, chloroplastic (Fragment... [more]
RR17_ARATH2.041e-859.6230S ribosomal protein S17, chloroplastic OS=Arabid... [more]
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BLAST of FE671684 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
B7FMT1_MEDTR2.754e-1462.67Putative uncharacterized protein OS=Medicago trunc... [more]
B9GG36_POPTR1.463e-761.22Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RQK5_RICCO3.260e-755.1030S ribosomal protein S17, putative OS=Ricinus com... [more]
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BLAST of FE671684 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G79850.11.653e-959.62| Symbols: RPS17, CS17, PRPS17 | ribosomal protein... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 57..83
score: 3.8
NoneNo IPR availablePANTHERPTHR10744:SF130S RIBOSOMAL PROTEIN S17coord: 57..83
score: 3.8
NoneNo IPR availableSEGsegsegcoord: 21..35
score
NoneNo IPR availableSEGsegsegcoord: 49..63
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FE671684 ID=FE671684; Name=FE671684; organism=Cicer arietinum; type=EST; length=250bp
CCGGGCTGCAGGAATTCGAACCCGGCTTCTGCAACTCCCTTCTAACCTCT
CAACTCCATTCCTCAACGGTGGTAACAGCAATGGATTGGGCCTCAACCGT
CTCTCAAAGCCCACATCCTCACTCCCTGTGGCCCAAACACATTCCCTTCC
CTTACCGTCAATCAAAGCCATGAAAACAATGGAAGGAAAAGTGGTTTGCT
CCACCAACGACAAGACGGTCGCGGTGGAGGTTGTTCGTTTACCGCCTCAT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_uS17