GR391308

EST Overview
NameGR391308
Unique NameGR391308
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length717
Libraries
Library NameType
LIBEST_024777 ICC1882 dehydration stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
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BLAST of GR391308 vs. TrEMBL
Match: Q39450_CICAR (Pathogenesis related protein OS=Cicer arietinum GN=capr1 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.615e-7
Identity = 29/44 (65.91%), Postives = 31/44 (70.45%), Query Frame = 2 
Query:   68 TASTVPPAKFY*AMPKDVDALFPKAVDAFYTAEPFDGNDGPATI 199
            TASTVPPAK Y AM KD D + PKAVDA  T E  +GN GP TI
Sbjct:   10 TASTVPPAKLYKAMVKDADVIIPKAVDAIKTVETVEGNGGPGTI 53
The following BLAST results are available for this feature:
BLAST of GR391308 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q39450_CICAR1.615e-765.91Pathogenesis related protein OS=Cicer arietinum GN... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..32
score
NoneNo IPR availableSEGsegsegcoord: 51..71
score
NoneNo IPR availableSEGsegsegcoord: 39..55
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR391308 ID=GR391308; Name=GR391308; organism=Cicer arietinum; type=EST; length=717bp
CTGTTCCCTCATATTTTATTATTCACCATATTTTTTCCTCTGGTGCTTTA
TTCCTTCTGAGTAATAAACCGCCTCCACTGTCCCTCCCGCCAAGTTCTAC
TAAGCTATGCCGAAAGATGTTGACGCCCTCTTCCCAAAGGCCGTTGATGC
CTTTTACACCGCCGAACCCTTTGATGGAAATGATGGTCCTGCAACCATCC
TTAACCCCCCCCCCCTTCTAGGCTGGACAAACTCCGTTCGCGTTGCACAT
CAGACAATCCCTTGTTGATATACATCCTGTCGACACAACTTTCCGCCCAT
TTGTTTTCTGTTTCTGTTCGCCTCAAACCGCGCCAAACCTATATCTTTTG
AGCGCTTACTTCTGCGAGCAATGCCCTATACCCCCTTGTCCCACCCGCCC
AACGCCGAGTCGTACATCTTATTCATCCCCTCCATTACTATGTCTATATC
CCTACTGCAGACAGGAACGTTCTATGAAGTTACTAACGCCACATAGCTTG
ACTCCTTTCTCTGCCCCTCGGCCCCACTGAATTGCCCCCCCCTTTATGCT
TCCTAATCTCCCATACTACGAACTAGCAATTCCCTCTAATCCAATTTAAC
AACCTTAACCAACTGTGCTCTTAAAAGCCCCCCCCCCTTTGTCTATCCTC
CACTTTTCATCTATAAAACTTCGCTCCTGCTTTGAGCATAGCCTCTATCT
CTTCACCACCTATCCTA
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