GR394260

EST Overview
NameGR394260
Unique NameGR394260
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length709
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR394260 vs. TrEMBL
Match: A6BKY6_9FIRM (Putative uncharacterized protein OS=Dorea longicatena DSM 13814 GN=DORLON_02997 PE=4 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 3.217e-12
Identity = 34/69 (49.28%), Postives = 38/69 (55.07%), Query Frame = -3
Query:  234 SSGYLDVSVHRVPSLAGSRA*PLL-----GFPIQISPTLAVVHTSSELLAVYHVFLRHETPRHPPCALS 425
            SSGYLDVSVHRVP L       +L     GFP         + +S +L A YHVF R   PRHPP ALS
Sbjct:  109 SSGYLDVSVHRVPLLTLCIGVRILEVCSSGFPHSEISGSKDICSSPKLFAAYHVFHRLLVPRHPPYALS 177          

HSP 2 Score: 43.5134 bits (101), Expect = 3.217e-12
Identity = 32/88 (36.36%), Postives = 39/88 (44.32%), Query Frame = -2
Query:  448 PPRYFCAIGRLMYLALEGGPPRFPQ---C*RVSWYSGYSHLSSAAPTGFSPSAIDFPKSFSFALPRIMESYNPSHRSDWFGLIGFRSP 702
            P +Y+       YLAL GGP  F Q   C  + W      + S   TG SPS   FPK+    L   +   NP   +  FGL  FRSP
Sbjct:   13 PSQYYALSVTKEYLALRGGPRIFSQGSTCLDLLWIPPCQLIFSL--TGLSPSLAGFPKTDLLNLLNQLCGPNPGMHAPRFGLFRFRSP 98          
BLAST of GR394260 vs. TrEMBL
Match: B9RRN3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1648660 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.412e-10
Identity = 31/41 (75.61%), Postives = 31/41 (75.61%), Query Frame = 3
Query:   57 RWVHESDEVALTTEPCLSVGVNWMIGPRAAPSSPHSPFPKI 179
            RWV ES EVAL TEPCL VG NWMIGPR   S PHSPFP I
Sbjct:   12 RWVDESAEVALPTEPCLPVGANWMIGPRTGLSFPHSPFPNI 52          
BLAST of GR394260 vs. TrEMBL
Match: A6BL10_9FIRM (Putative uncharacterized protein OS=Dorea longicatena DSM 13814 GN=DORLON_03026 PE=4 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 2.946e-9
Identity = 34/69 (49.28%), Postives = 38/69 (55.07%), Query Frame = -3
Query:  234 SSGYLDVSVHRVPSLAGSRA*PLL-----GFPIQISPTLAVVHTSSELLAVYHVFLRHETPRHPPCALS 425
            SSGYLDVSVHRVP L       +L     GFP         + +S +L A YHVF R   PRHPP ALS
Sbjct:   60 SSGYLDVSVHRVPLLTLCIGVRILEVCSSGFPHSEISGSKDICSSPKLFAAYHVFHRLLVPRHPPYALS 128          

HSP 2 Score: 33.4982 bits (75), Expect = 2.946e-9
Identity = 21/50 (42.00%), Postives = 25/50 (50.00%), Query Frame = -2
Query:  448 SHLSSAAPTGFSPSAIDFPKSFSFALPRIMESYNPSHRSDWFGLIGFRSP 597
            +HLS    TG SPS   FPK+    L   +   NP   +  FGL  FRSP
Sbjct:    3 THLSL---TGLSPSLAGFPKTVLLNLLNQLCGPNPGMHAPRFGLFRFRSP 49          
BLAST of GR394260 vs. TrEMBL
Match: A5KR92_9FIRM (Putative uncharacterized protein OS=Ruminococcus torques ATCC 27756 GN=RUMTOR_02784 PE=4 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 4.084e-9
Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = -3
Query:  237 SSGYLDVSVHRVPSLA---GSRA*PLLG--FP-IQISPTLAVVHTSSELLAVYHVFLRHETPRHPPCAL 425
            SSGYLDVSVHRVP L    G R   +    FP  +IS ++ +   S +L A YHVF R   PRHPP AL
Sbjct:   60 SSGYLDVSVHRVPFLTLWIGVRITEVCSVRFPHSEISGSMGIC-PSPKLFAAYHVFHRLLVPRHPPYAL 127          

HSP 2 Score: 36.1946 bits (82), Expect = 4.084e-9
Identity = 18/42 (42.86%), Postives = 21/42 (50.00%), Query Frame = -2
Query:  448 TGFSPSAIDFPKSFSFALPRIMESYNPSHRSDWFGLIGFRSP 573
            TG SPS + FPK+    L       NP   +  FGL  FRSP
Sbjct:    8 TGLSPSLVSFPKTVLLNLLNQFRGPNPGMHASRFGLFRFRSP 49          
BLAST of GR394260 vs. TrEMBL
Match: A6BL09_9FIRM (Putative uncharacterized protein OS=Dorea longicatena DSM 13814 GN=DORLON_03023 PE=4 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 4.905e-9
Identity = 34/69 (49.28%), Postives = 38/69 (55.07%), Query Frame = -3
Query:  234 SSGYLDVSVHRVPSLAGSRA*PLL-----GFPIQISPTLAVVHTSSELLAVYHVFLRHETPRHPPCALS 425
            SSGYLDVSVHRVP L       +L     GFP         + +S +L A YHVF R   PRHPP ALS
Sbjct:   60 SSGYLDVSVHRVPLLTLCIGVRILEVCSSGFPHSEISGSKDICSSPKLFAAYHVFHRLLVPRHPPYALS 128          

HSP 2 Score: 32.7278 bits (73), Expect = 4.905e-9
Identity = 21/50 (42.00%), Postives = 25/50 (50.00%), Query Frame = -2
Query:  448 SHLSSAAPTGFSPSAIDFPKSFSFALPRIMESYNPSHRSDWFGLIGFRSP 597
            +HLS    TG SPS   FPK+    L   +   NP   +  FGL  FRSP
Sbjct:    3 THLSL---TGLSPSLAGFPKTGLLNLLNQLCGPNPGMHAPRFGLFRFRSP 49          
BLAST of GR394260 vs. TrEMBL
Match: B9RPV9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1542210 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.213e-7
Identity = 28/31 (90.32%), Postives = 30/31 (96.77%), Query Frame = -1
Query:   32 QFTPTDRHGSVVKATSSLSCTHRTAALSGLP 124
            QFTPTDRHGSVVKATSSLSCT+RT ALSG+P
Sbjct:   57 QFTPTDRHGSVVKATSSLSCTYRTIALSGVP 87          
BLAST of GR394260 vs. TrEMBL
Match: C9YEF0_9BURK (Putative uncharacterized protein OS=Curvibacter putative symbiont of Hydra magnipapillata GN=Csp_D29560 PE=4 SV=1)

HSP 1 Score: 42.3578 bits (98), Expect = 5.073e-7
Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = -3
Query:  237 LGFPIQISPTLAVVHTSSELLAVYHVFLRHETPRHPPCAL 356
            +GFPI+ SP  ++  +S +L+A YHV  R   PRHPP AL
Sbjct:  124 VGFPIRKSPDQSLFASSPKLIAGYHVLRRLSLPRHPPHAL 163          

HSP 2 Score: 31.5722 bits (70), Expect = 5.073e-7
Identity = 21/44 (47.73%), Postives = 25/44 (56.82%), Query Frame = -1
Query:  332 RLSLATTNRIFSFPPAT*MFQFTGFPPLRVAGHDPCWVSPFRYL 463
            R  L + +R+ SFP AT MFQFT     R A HD  +V   RYL
Sbjct:   86 RSPLLSESRLMSFPRATEMFQFT-----RFASHD--YVFIMRYL 122          

HSP 3 Score: 23.8682 bits (50), Expect = 5.073e-7
Identity = 18/45 (40.00%), Postives = 21/45 (46.67%), Query Frame = -2
Query:  541 YLALEGGPPRFPQ---C*RVSWYSGYSHLSSAAPTGFSPSAIDFP 666
            YLALE GPP F Q   C  + + S   H S     G+ P    FP
Sbjct:   26 YLALEDGPPIFRQDFSCPALLFASSVPHRSFHV-RGYHPLWPAFP 69          
BLAST of GR394260 vs. TrEMBL
Match: B5CMS1_9FIRM (Putative uncharacterized protein OS=Ruminococcus lactaris ATCC 29176 GN=RUMLAC_00756 PE=4 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 7.535e-7
Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = -3
Query:  237 SSGYLDVSVHRVPSLA---GSRA*PLLG--FP-IQISPTLAVVHTSSELLAVYHVFLRHETPRHPPCAL 425
            SSGYLDVSVHRVP L    G R   +    FP  +IS ++ +   S +L A YHVF R   PRHPP AL
Sbjct:   35 SSGYLDVSVHRVPFLTLWIGVRIPEVCSGRFPHSEISGSMGIC-PSPKLFAAYHVFHRLLVPRHPPYAL 102          

HSP 2 Score: 28.4906 bits (62), Expect = 7.535e-7
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = -2
Query:  448 NPSHRSDWFGLIGFRSP 498
            NPS  + WFGL  FRSP
Sbjct:    8 NPSMHAHWFGLFRFRSP 24          
The following BLAST results are available for this feature:
BLAST of GR394260 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8
Match NameE-valueIdentityDescription
A6BKY6_9FIRM3.217e-1249.28Putative uncharacterized protein OS=Dorea longicat... [more]
B9RRN3_RICCO4.412e-1075.61Putative uncharacterized protein OS=Ricinus commun... [more]
A6BL10_9FIRM2.946e-949.28Putative uncharacterized protein OS=Dorea longicat... [more]
A5KR92_9FIRM4.084e-950.72Putative uncharacterized protein OS=Ruminococcus t... [more]
A6BL09_9FIRM4.905e-949.28Putative uncharacterized protein OS=Dorea longicat... [more]
B9RPV9_RICCO1.213e-790.32Putative uncharacterized protein OS=Ricinus commun... [more]
C9YEF0_9BURK5.073e-750.00Putative uncharacterized protein OS=Curvibacter pu... [more]
B5CMS1_9FIRM7.535e-750.72Putative uncharacterized protein OS=Ruminococcus l... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 1..20
score
NoneNo IPR availableSEGsegsegcoord: 59..75
score
NoneNo IPR availableSEGsegsegcoord: 6..18
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394260 ID=GR394260; Name=GR394260; organism=Cicer arietinum; type=EST; length=709bp
GTGGTATCAACGCAGAGTGAATCGGTCCCTAAGGAAGCCCCGAAAGGGCT
GCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACC
ATGCCTGTCTGTTGGGGTGAATTGGATGATCGGGCCGAGGGCTGCCCCCT
CTTCCCCTCACTCTCCTTTCCCTAAGATTAACCTTGAGTCATCAAAGCCT
TTCTGACTCGGCCTGGCCCGGTCGCCCTACGCGACTAAGGGCGCATGGTG
GATGTCTTGGCGTCTCGTGCCGAAGAAAGACGTGGTACACTGCGAGAAGC
TCCGATGAGGTGTGTACAACCGCAAGAGTCGGAGATATCTGAATGGGGAA
ACCCAGCAGGGGTCATGCCCTGCTACCCGCAAGGGAGGGAACCCGGTGAA
CTGAAACATCTAAGTAGCCGGAGGAAAAGAGAAGATTCGGTTAGTAGTGG
CGAGCGAAAGCCGATTAGCCCAAACCAGTCACTACGGTGGCTGGGGTTGT
AGGACTCCATAATTCGAGGTAAGGCGAAGCTGAATGACTTGGGAAAGTCA
ATCGCAGAAGGTGAGAATCCTGTAGGCGCAGCCGAGCTAAGATGGGAGTA
TCCTGAGTACCACGATACACGCTAACATTGTGGGAATCTAGGGGGTCCAC
CCTCTAAGGCTAAATACATGAGACGACCGATAGCGCAAAAGTACCGTGGG
GGGANAAAA
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