GR408952
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR408952 vs. SwissProt
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.366e-12 Identity = 42/75 (56.00%), Postives = 46/75 (61.33%), Query Frame = -3 Query: 276 GAIKNKNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 500 G N H K I S GK CPK KAIKRF+VRNI + A DV A VY+ YTL KLYAK Q +SC IHSH Sbjct: 8 GGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of GR408952 vs. SwissProt
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.991e-12 Identity = 41/75 (54.67%), Postives = 45/75 (60.00%), Query Frame = -3 Query: 276 GAIKNKNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 500 G N H I S GK CPK KAIKRF+VRNI + A DV A VY+ YTL KLYAK Q +SC IHSH Sbjct: 8 GGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of GR408952 vs. SwissProt
Match: RS261_ARATH (40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.991e-12 Identity = 41/75 (54.67%), Postives = 45/75 (60.00%), Query Frame = -3 Query: 276 GAIKNKNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 500 G N H I S GK CPK KAIKRF+VRNI + A DV A VY+ YTL KLYAK Q +SC IHSH Sbjct: 8 GGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of GR408952 vs. SwissProt
Match: RS26_ORYSJ (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica GN=RPS26 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.462e-11 Identity = 37/66 (56.06%), Postives = 42/66 (63.64%), Query Frame = -3 Query: 276 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 473 H K+I S K CPK KAIKRF VRNI + A DV ACV+D Y L KLYAK +SC IH+H Sbjct: 17 HVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAH 82
BLAST of GR408952 vs. SwissProt
Match: RS26_CAEEL (40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 3.535e-8 Identity = 33/69 (47.83%), Postives = 40/69 (57.97%), Query Frame = -3 Query: 279 KNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHS 485 KN H FI + G+ CPK KAIK+F+VRNI A D+ A Y QY L KLY K ++C IHS Sbjct: 13 KNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHYCIACAIHS 81
BLAST of GR408952 vs. SwissProt
Match: RS26_OCTVU (40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 3.909e-7 Identity = 34/79 (43.04%), Postives = 44/79 (55.70%), Query Frame = -3 Query: 279 QTQGRGAIKNKNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHS 515 + GRG K H K+I + + PK KAIK+F++RNI A D+ A VY+ Y L KLYAK +SC IHS Sbjct: 6 RNNGRG---KKGRGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLYCVSCAIHS 81
BLAST of GR408952 vs. SwissProt
Match: RS26_BRUPA (40S ribosomal protein S26 (Fragment) OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 5.105e-7 Identity = 32/77 (41.56%), Postives = 41/77 (53.25%), Query Frame = -3 Query: 279 QGRGAIKNKNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHS 509 +GRG ++ C + G+ PK KAIK+F+VRNI A D+ A YD Y L KLY K +SC IHS Sbjct: 13 KGRGHVRPIRC--------TNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYDSYALPKLYHKLHYCVSCAIHS 81
BLAST of GR408952 vs. TrEMBL
Match: Q9ZT03_MEDSA (Clone MS56 unknown mRNA OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.646e-14 Identity = 44/67 (65.67%), Postives = 47/67 (70.15%), Query Frame = -3 Query: 276 EHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 476 +H KFI S GK CPK KAIKRFLVRNI + A DV ACVYDQYTL KLY K Q +SC IHSH Sbjct: 10 DHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLHKLYVKMQYCVSCAIHSH 76
BLAST of GR408952 vs. TrEMBL
Match: Q9SWS9_PEA (Ribosomal protein S26 OS=Pisum sativum GN=RPS26 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.513e-14 Identity = 44/66 (66.67%), Postives = 46/66 (69.70%), Query Frame = -3 Query: 276 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 473 H KFI S GK CPK KAIKRFLVRNI + A DV ACVYDQYTL KLY K Q +SC IHSH Sbjct: 17 HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSH 82
BLAST of GR408952 vs. TrEMBL
Match: D7T4E4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_67.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032696001 PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.894e-14 Identity = 48/83 (57.83%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 276 VIQTQGRGAIKNKNCE-HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 521 V+ + R +NK+ H KFI S GK CPK KAIKRFLVRNI + A DV ACVYD YTL KLYAK Q +SC IHSH Sbjct: 26 VMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDTYTLPKLYAKMQYCVSCAIHSH 108
BLAST of GR408952 vs. TrEMBL
Match: D7SJK1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024576001 PE=4 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.698e-14 Identity = 44/66 (66.67%), Postives = 46/66 (69.70%), Query Frame = -3 Query: 276 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 473 H KFI S GK CPK KAIKRFLVRNI + A DV ACVYD YTL KLYAK Q +SC IHSH Sbjct: 45 HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDTYTLPKLYAKMQYCVSCAIHSH 110
BLAST of GR408952 vs. TrEMBL
Match: C6TAV9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.313e-13 Identity = 43/66 (65.15%), Postives = 46/66 (69.70%), Query Frame = -3 Query: 276 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 473 H KFI S GK CPK KAIKRFLVRNI + A DV ACVY+QYTL KLY K Q +SC IHSH Sbjct: 17 HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSH 82
BLAST of GR408952 vs. TrEMBL
Match: C6SXR4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.313e-13 Identity = 43/66 (65.15%), Postives = 46/66 (69.70%), Query Frame = -3 Query: 276 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 473 H KFI S GK CPK KAIKRFLVRNI + A DV ACVY+QYTL KLY K Q +SC IHSH Sbjct: 17 HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSH 82
BLAST of GR408952 vs. TrEMBL
Match: C6SXI6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.313e-13 Identity = 43/66 (65.15%), Postives = 46/66 (69.70%), Query Frame = -3 Query: 276 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 473 H KFI S GK CPK KAIKRFLVRNI + A DV ACVY+QYTL KLY K Q +SC IHSH Sbjct: 17 HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSH 82
BLAST of GR408952 vs. TrEMBL
Match: C6SWA5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.313e-13 Identity = 43/66 (65.15%), Postives = 46/66 (69.70%), Query Frame = -3 Query: 276 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 473 H KFI S GK CPK KAIKRFLVRNI + A DV ACVY+QYTL KLY K Q +SC IHSH Sbjct: 17 HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSH 82
BLAST of GR408952 vs. TrEMBL
Match: C6T4K2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.240e-13 Identity = 42/66 (63.64%), Postives = 46/66 (69.70%), Query Frame = -3 Query: 276 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 473 H KFI S GK CPK KAIKRFLVRNI + A DV ACVY+QYT+ KLY K Q +SC IHSH Sbjct: 17 HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTIPKLYVKMQYCVSCAIHSH 82
BLAST of GR408952 vs. TrEMBL
Match: A9PJB6_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.229e-11 Identity = 40/65 (61.54%), Postives = 43/65 (66.15%), Query Frame = -3 Query: 279 HRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHS 473 H KFI S GK CPK KAIKRFLVRNI + A DV +CVYD Y L KLY K Q +SC IHS Sbjct: 17 HTKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQESCVYDGYVLPKLYVKMQYCVSCAIHS 81
BLAST of GR408952 vs. TAIR peptide
Match: AT3G56340.1 (| Symbols: | Ribosomal protein S26e family protein | chr3:20892309-20893343 REVERSE LENGTH=130) HSP 1 Score: 72.7886 bits (177), Expect = 2.341e-13 Identity = 42/75 (56.00%), Postives = 46/75 (61.33%), Query Frame = -3 Query: 276 GAIKNKNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 500 G N H K I S GK CPK KAIKRF+VRNI + A DV A VY+ YTL KLYAK Q +SC IHSH Sbjct: 8 GGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of GR408952 vs. TAIR peptide
Match: AT2G40590.1 (| Symbols: | Ribosomal protein S26e family protein | chr2:16945215-16946345 REVERSE LENGTH=131) HSP 1 Score: 70.8626 bits (172), Expect = 8.894e-13 Identity = 41/75 (54.67%), Postives = 45/75 (60.00%), Query Frame = -3 Query: 276 GAIKNKNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 500 G N H I S GK CPK KAIKRF+VRNI + A DV A VY+ YTL KLYAK Q +SC IHSH Sbjct: 8 GGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of GR408952 vs. TAIR peptide
Match: AT2G40510.1 (| Symbols: | Ribosomal protein S26e family protein | chr2:16918506-16919623 FORWARD LENGTH=133) HSP 1 Score: 70.8626 bits (172), Expect = 8.894e-13 Identity = 41/75 (54.67%), Postives = 45/75 (60.00%), Query Frame = -3 Query: 276 GAIKNKNCEHRKFI*GSGYGKKCPKIKAIKRFLVRNIGARTAFGDVH*ACVYDQYTLLKLYAKKQ*FLSCVIHSH 500 G N H I S GK CPK KAIKRF+VRNI + A DV A VY+ YTL KLYAK Q +SC IHSH Sbjct: 8 GGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82 The following BLAST results are available for this feature:
BLAST of GR408952 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 7
BLAST of GR408952 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR408952 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR408952 ID=GR408952; Name=GR408952; organism=Cicer arietinum; type=EST; length=766bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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